PDB: 5515 resultsInfo pagesStatus searchChemie searchBIRD

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6G6O	Crystal structure of the computationally designed Ika8 protein: crystal packing No.1 in P63 Descriptor: GLYCEROL, Ika8 Authors: Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. Deposit date: 2018-04-01 Release date: 2018-11-28 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
8JH6	Crystal structure of apixaban-bound racemic ABLE Descriptor: 1-(4-METHOXYPHENYL)-7-OXO-6-[4-(2-OXOPIPERIDIN-1-YL)PHENYL]-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3,4-C]PYRIDINE-3-CARBOXAMIDE, D-ABLE, L-ABLE Authors: Zhao, K, Li, T. Deposit date: 2023-05-22 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of apixaban-bound racemic ABLE To Be Published
7LZ3	Computational design of constitutively active cGAS Descriptor: Cyclic GMP-AMP synthase, GLYCEROL, ZINC ION Authors: Dowling, Q, Volkman, H.E, Gray, E.E, Ovchinnikov, S, Cambier, S, Bera, A.K, Bick, M, Kang, A, Stetson, D.B, King, N.P. Deposit date: 2021-03-08 Release date: 2022-03-16 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Computational design of constitutively active cGAS. Nat.Struct.Mol.Biol., 30, 2023
8JYT	Ancestral imine reducatase N560 Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ancestra imine reductase Authors: Zhu, X.X. Deposit date: 2023-07-03 Release date: 2023-10-11 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.79 Å) Cite: The structure of ancestral imine reductase N560. To Be Published
6H7I	Trpzip2 structure in presence of exogenous haloprotectant molecule. Descriptor: Trpzip2 Authors: Prior, S.H. Deposit date: 2018-07-31 Release date: 2019-08-14 Method: SOLUTION NMR Cite: Trpzip2 structure in presence of exogenous haloprotectant molecule. To Be Published
6UGC	C3 symmetric peptide design number 3 Descriptor: C3-3 cyclic peptide design, CADMIUM ION, SODIUM ION Authors: Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D. Deposit date: 2019-09-26 Release date: 2020-12-02 Method: X-RAY DIFFRACTION (0.9 Å) Cite: Computational design of mixed chirality peptide macrocycles with internal symmetry. Protein Sci., 29, 2020
6G6N	Crystal structure of the computationally designed Tako8 protein in C2 Descriptor: Tako8 Authors: Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. Deposit date: 2018-04-01 Release date: 2018-11-28 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.001 Å) Cite: Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
6FPA	Crystal structure of anti-mTFP1 DARPin 1238_G01 in space group P212121 Descriptor: DARPin 1238_G01 Authors: Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T. Deposit date: 2018-02-09 Release date: 2018-10-03 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.58 Å) Cite: DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations. Biol Open, 7, 2018
6I3B	Crystal structure of cPizza6-AYW, a circularly permuted designer protein Descriptor: cPizza6-AYW Authors: Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D. Deposit date: 2018-11-05 Release date: 2019-11-20 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1 Å) Cite: Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein. Protein Sci., 2020
8JKU	Ancestal imine reductase Descriptor: Ancestral imine reductase N559, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Authors: Zhu, X.X, Zheng, G.W. Deposit date: 2023-06-01 Release date: 2023-08-09 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.57 Å) Cite: Structure of ancestral imine reductase at 2.56 Angstroms resolution. To Be Published
6I37	Crystal structure of nv1Pizza6-AYW, a circularly permuted designer protein Descriptor: SULFATE ION, nv1Pizza6-AYW Authors: Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D. Deposit date: 2018-11-05 Release date: 2019-11-20 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein. Protein Sci., 2020
6I39	Crystal structure of v31Pizza6-AYW, a circularly permuted designer protein Descriptor: MAGNESIUM ION, v31Pizza6-AYW Authors: Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D. Deposit date: 2018-11-05 Release date: 2019-11-20 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.05 Å) Cite: Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein. Protein Sci., 2020
8OT7	Crystal structure of an 8-repeat consensus TPR superhelix with Barium Descriptor: BARIUM ION, Consensus tetratricopeptide repeat protein Authors: Liutkus, M, Rojas, A.L, Cortajarena, A.L. Deposit date: 2023-04-20 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Diverse crystalline protein scaffolds through metal-dependent polymorphism. Protein Sci., 33, 2024
6I1J	Selective formation of trinuclear transition metal centers in a trimeric helical peptide Descriptor: A helical peptide containing a trinuclear Cu(II) center: HisAD, COPPER (II) ION Authors: Boyle, A.L, Pannu, N.S. Deposit date: 2018-10-28 Release date: 2019-09-04 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Selective coordination of three transition metal ions within a coiled-coil peptide scaffold. Chem Sci, 10, 2019
6I38	Crystal structure of nv2Pizza6-AYW, a circularly permuted designer protein Descriptor: nv2Pizza6-AYW Authors: Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D. Deposit date: 2018-11-05 Release date: 2019-11-20 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein. Protein Sci., 2020
6IMG	Solution Structure of Bicyclic Peptide pb-13 Descriptor: (ACE)-GLY-CYS-PRO-CYS-ILE-TRP-PRO-GLU-LEU-CYS-PRO-TRP-ILE-ARG-SER-CYS-(NH2) Authors: Yao, H, Lin, P, Zha, J, Zha, M, Zhao, Y, Wu, C. Deposit date: 2018-10-22 Release date: 2019-08-28 Method: SOLUTION NMR Cite: Ordered and Isomerically Stable Bicyclic Peptide Scaffolds Constrained through Cystine Bridges and Proline Turns. Chembiochem, 20, 2019
6I3A	Crystal structure of v22Pizza6-AYW, a circularly permuted designer protein Descriptor: BROMIDE ION, v22Pizza6-AYW Authors: Mylemans, B, Noguchi, H, Deridder, E, Voet, A.R.D. Deposit date: 2018-11-05 Release date: 2019-11-20 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Influence of circular permutations on the structure and stability of a six-fold circular symmetric designer protein. Protein Sci., 2020
8ATC	COMPLEX OF N-PHOSPHONACETYL-L-ASPARTATE WITH ASPARTATE CARBAMOYLTRANSFERASE. X-RAY REFINEMENT, ANALYSIS OF CONFORMATIONAL CHANGES AND CATALYTIC AND ALLOSTERIC MECHANISMS Descriptor: ASPARTATE CARBAMOYLTRANSFERASE (R STATE), CATALYTIC CHAIN, ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN, ... Authors: Ke, H, Lipscomb, W.N, Cho, Y, Honzatko, R.B. Deposit date: 1989-08-25 Release date: 1990-10-15 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Complex of N-phosphonacetyl-L-aspartate with aspartate carbamoyltransferase. X-ray refinement, analysis of conformational changes and catalytic and allosteric mechanisms. J.Mol.Biol., 204, 1988
8AED	Broadly neutralizing DARPin bnD.9 in complex with the HIV-1 envelope variable loop 3 peptide V3 (BG505) Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Broadly neutralizing DARPin bnD.9, ... Authors: Mittl, P, Gloegl, M. Deposit date: 2022-07-13 Release date: 2023-08-16 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.17 Å) Cite: Trapping the HIV-1 V3 loop in a helical conformation enables broad neutralization. Nat.Struct.Mol.Biol., 30, 2023
8BAO	Dysgonamonadaceae bacterium CRISPR ancillary nuclease 2 Descriptor: BROMIDE ION, Cyclic tetra-adenylate (cA4), DUF1887 family protein, ... Authors: Li, A.W.H, Doherty, A.J. Deposit date: 2022-10-11 Release date: 2022-11-30 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.06 Å) Cite: Reverse transcriptases prime DNA synthesis. Nucleic Acids Res., 51, 2023
8B9Y	Cysteine Synthase from Trypanosoma cruzi with PLP and OAS Descriptor: Cysteine synthase, putative, GLYCEROL, ... Authors: Sowerby, K.V, Pohl, E. Deposit date: 2022-10-10 Release date: 2023-05-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Cysteine synthase: multiple structures of a key enzyme in cysteine synthesis and a potential drug target for Chagas disease and leishmaniasis. Acta Crystallogr D Struct Biol, 79, 2023
8B9W	Cysteine Synthase from Trypanosoma theileri with PLP bound Descriptor: CHLORIDE ION, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ... Authors: Sowerby, K.V, Pohl, E. Deposit date: 2022-10-10 Release date: 2023-05-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Cysteine synthase: multiple structures of a key enzyme in cysteine synthesis and a potential drug target for Chagas disease and leishmaniasis. Acta Crystallogr D Struct Biol, 79, 2023
8B9M	Cysteine Synthase from Leishmania Infantum Descriptor: CHLORIDE ION, Cysteine synthase, GLYCEROL Authors: Sowerby, K.V, Pohl, E. Deposit date: 2022-10-06 Release date: 2023-05-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Cysteine synthase: multiple structures of a key enzyme in cysteine synthesis and a potential drug target for Chagas disease and leishmaniasis. Acta Crystallogr D Struct Biol, 79, 2023
8BGJ	Crystal structure of Reverse Transcriptase domain from Caloramator australicus CART-CAPP Descriptor: L(+)-TARTARIC ACID, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ... Authors: Li, A.W.H, Doherty, A.J. Deposit date: 2022-10-27 Release date: 2023-06-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Reverse transcriptases prime DNA synthesis. Nucleic Acids Res., 51, 2023
8B45	Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4 Descriptor: 1,2-ETHANEDIOL, CC-Tri-(UbUc)4, SODIUM ION, ... Authors: Kumar, P, Martin, F.J.O, Dawson, W.M, Zieleniewski, F, Woolfson, D.N. Deposit date: 2022-09-19 Release date: 2023-09-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4 To Be Published

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