Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4LIT
DownloadVisualize
BU of 4lit by Molmil
Structure of YcfD a Ribosomal oxygenase from Escherichia coli in complex with Cobalt and 2-oxoglutarate.
Descriptor: 2-OXOGLUTARIC ACID, 50S ribosomal protein L16 arginine hydroxylase, COBALT (II) ION
Authors:Brissett, N.C, Doherty, A.J.
Deposit date:2013-07-03
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ribosomal oxygenases are structurally conserved from prokaryotes to humans.
Nature, 509, 2014
4EBG
DownloadVisualize
BU of 4ebg by Molmil
Crystal structure of a DUF4467 family protein (SAV0303) from Staphylococcus aureus subsp. aureus Mu50 at 1.35 A resolution
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-03-23
Release date:2012-05-23
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of a hypothetical protein (SAV0303) from Staphylococcus aureus subsp. aureus Mu50 at 1.35 A resolution
To be published
4R6S
DownloadVisualize
BU of 4r6s by Molmil
Crystal structure of PPARgammma in complex with SR1663
Descriptor: 4'-[(2,3-dimethyl-5-{[(1R)-1-(4-nitrophenyl)ethyl]carbamoyl}-1H-indol-1-yl)methyl]biphenyl-2-carboxylic acid, Peroxisome proliferator-activated receptor gamma
Authors:Marciano, D.P, Griffin, P.R, Bruning, J.B.
Deposit date:2014-08-26
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Pharmacological repression of PPAR gamma promotes osteogenesis.
Nat Commun, 6, 2015
4RIK
DownloadVisualize
BU of 4rik by Molmil
Amyloid forming segment, AVVTGVTAV, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 69-77
Descriptor: Alpha-synuclein
Authors:Guenther, E.L, Sawaya, M.R, Ivanova, M, Eisenberg, D.S.
Deposit date:2014-10-06
Release date:2015-08-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
4J6C
DownloadVisualize
BU of 4j6c by Molmil
The 1.9 A crystal structure of CYP154C5 from Nocardia farcinica in complex with progesterone
Descriptor: Cytochrome P450 monooxygenase, FORMIC ACID, MAGNESIUM ION, ...
Authors:Herzog, K, Hoffmann, K.M.
Deposit date:2013-02-11
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzyme-substrate complex structures of CYP154C5 shed light on its mode of highly selective steroid hydroxylation.
Acta Crystallogr.,Sect.D, 70, 2014
4RIL
DownloadVisualize
BU of 4ril by Molmil
Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction
Descriptor: Alpha-synuclein
Authors:Rodriguez, J.A, Ivanova, M, Sawaya, M.R, Cascio, D, Reyes, F, Shi, D, Johnson, L, Guenther, E, Sangwan, S, Hattne, J, Nannenga, B, Brewster, A.S, Messerschmidt, M, Boutet, S, Sauter, N.K, Gonen, T, Eisenberg, D.S.
Deposit date:2014-10-06
Release date:2015-08-26
Last modified:2023-09-20
Method:ELECTRON CRYSTALLOGRAPHY (1.43 Å)
Cite:Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
4J9I
DownloadVisualize
BU of 4j9i by Molmil
Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P17
Descriptor: GLYCEROL, P17, Tyrosine-protein kinase ABL1
Authors:Camara-Artigas, A.
Deposit date:2013-02-16
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P17
To be Published
3SOO
DownloadVisualize
BU of 3soo by Molmil
Crystal structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from HOMO SAPIENS at 2.73 A resolution
Descriptor: CHLORIDE ION, LINE-1 type transposase domain-containing protein 1, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)
Deposit date:2011-06-30
Release date:2011-07-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Crystal structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from HOMO SAPIENS at 2.73 A resolution
To be published
4JBA
DownloadVisualize
BU of 4jba by Molmil
Crystal Structure of the Oxidized Form of MarR from E.coli
Descriptor: Multiple antibiotic resistance protein MarR
Authors:Lou, H, Zhu, R, Hao, Z.
Deposit date:2013-02-19
Release date:2013-10-16
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli.
Nat.Chem.Biol., 10, 2014
4DVH
DownloadVisualize
BU of 4dvh by Molmil
Crystal structure of Trypanosoma cruzi mitochondrial iron superoxide dismutase
Descriptor: FE (III) ION, Superoxide dismutase
Authors:Larrieux, N, Buschiazzo, A.
Deposit date:2012-02-23
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structural and Molecular Basis of the Peroxynitrite-mediated Nitration and Inactivation of Trypanosoma cruzi Iron-Superoxide Dismutases (Fe-SODs) A and B: DISPARATE SUSCEPTIBILITIES DUE TO THE REPAIR OF TYR35 RADICAL BY CYS83 IN Fe-SODB THROUGH INTRAMOLECULAR ELECTRON TRANSFER.
J.Biol.Chem., 289, 2014
4JBT
DownloadVisualize
BU of 4jbt by Molmil
The 2.2 A crystal structure of CYP154C5 from Nocardia farcinica in complex with androstenedione
Descriptor: 4-ANDROSTENE-3-17-DIONE, Cytochrome P450 monooxygenase, FORMIC ACID, ...
Authors:Herzog, K, Hoffmann, K.M.
Deposit date:2013-02-20
Release date:2014-03-05
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Enzyme-substrate complex structures of CYP154C5 shed light on its mode of highly selective steroid hydroxylation.
Acta Crystallogr.,Sect.D, 70, 2014
4DRI
DownloadVisualize
BU of 4dri by Molmil
Co-crystal structure of the PPIase domain of FKBP51, Rapamycin and the FRB fragment of mTOR
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP5, RAPAMYCIN IMMUNOSUPPRESSANT DRUG, Serine/threonine-protein kinase mTOR
Authors:Maerz, A.M, Bracher, A, Hausch, F.
Deposit date:2012-02-17
Release date:2013-02-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Large FK506-Binding Proteins Shape the Pharmacology of Rapamycin.
Mol.Cell.Biol., 33, 2013
3T0P
DownloadVisualize
BU of 3t0p by Molmil
Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-07-20
Release date:2011-08-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
To be published
4DIZ
DownloadVisualize
BU of 4diz by Molmil
Thaumatin I by Classical Hanging Drop Method at 1.98A resolution for Unique Water Distribution
Descriptor: Thaumatin I
Authors:Pechkova, E, Sivozhelezov, V, Belmonte, L, Nicolini, C.
Deposit date:2012-02-01
Release date:2012-07-18
Last modified:2012-10-31
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Unique water distribution of Langmuir-Blodgett versus classical crystals.
J.Struct.Biol., 180, 2012
4DNQ
DownloadVisualize
BU of 4dnq by Molmil
Crystal Structure of DAD2 S96A mutant
Descriptor: DAD2
Authors:Hamiaux, C.
Deposit date:2012-02-08
Release date:2012-11-14
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:DAD2 Is an alpha/beta Hydrolase likely to Be Involved in the Perception of the Plant Branching Hormone, Strigolactone
Curr.Biol., 22, 2012
4DYX
DownloadVisualize
BU of 4dyx by Molmil
Crystal Structure of the Cu-adduct of Human H-Ferritin variant 4His-delta C-star
Descriptor: CALCIUM ION, COPPER (II) ION, Ferritin heavy chain
Authors:Tezcan, F.A, Huard, D.J.E.
Deposit date:2012-02-29
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Re-engineering protein interfaces yields copper-inducible ferritin cage assembly.
Nat.Chem.Biol., 9, 2013
4POC
DownloadVisualize
BU of 4poc by Molmil
Structure of Triosephosphate Isomerase Wild Type human enzyme.
Descriptor: BROMIDE ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Amrich, C.G, Aslam, A.A, Heroux, A, VanDemark, A.P.
Deposit date:2014-02-25
Release date:2015-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Triosephosphate isomerase I170V alters catalytic site, enhances stability and induces pathology in a Drosophila model of TPI deficiency.
Biochim.Biophys.Acta, 1852, 2015
4DVK
DownloadVisualize
BU of 4dvk by Molmil
Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 strain NCP-7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E(rns) glycoprotein, ...
Authors:Krey, T, Bontems, F, Vonrhein, C, Vaney, M.-C, Bricogne, G, Ruemenapf, T, Rey, F.A.
Deposit date:2012-02-23
Release date:2012-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of the Pestivirus Envelope Glycoprotein E(rns) and Mechanistic Analysis of Its Ribonuclease Activity.
Structure, 20, 2012
4PUB
DownloadVisualize
BU of 4pub by Molmil
Crystal structure of Fab DX-2930
Descriptor: CHLORIDE ION, DX-2930 HEAVY CHAIN, DX-2930 LIGHT CHAIN
Authors:Abendroth, J, Edwards, T.E, Nixon, A, Ladner, R.
Deposit date:2014-03-12
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inhibition of plasma kallikrein by a highly specific active site blocking antibody.
J.Biol.Chem., 289, 2014
4LAY
DownloadVisualize
BU of 4lay by Molmil
Crystal Structure Analysis of FKBP52, Complex with I63
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP4, {3-[(1R)-3-(3,4-dimethoxyphenyl)-1-({[(2S)-1-(3,3-dimethyl-2-oxopentanoyl)piperidin-2-yl]carbonyl}oxy)propyl]phenoxy}acetic acid
Authors:Bracher, A, Kozany, C, Haehle, A, Wild, P, Zacharias, M, Hausch, F.
Deposit date:2013-06-20
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of the Free and Ligand-Bound FK1-FK2 Domain Segment of FKBP52 Reveal a Flexible Inter-Domain Hinge.
J.Mol.Biol., 425, 2013
4PV9
DownloadVisualize
BU of 4pv9 by Molmil
Crystal Structure of H2Kb-Q600V complex
Descriptor: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
Authors:Twist, K.-A, Rossjohn, J, Gras, S.
Deposit date:2014-03-15
Release date:2014-04-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional correlates of enhanced antiviral immunity generated by heteroclitic CD8 T cell epitopes.
J.Immunol., 192, 2014
4LAW
DownloadVisualize
BU of 4law by Molmil
Crystal Structure Analysis of FKBP52, Crystal Form III
Descriptor: DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase FKBP4
Authors:Bracher, A, Kozany, C, Haehle, A, Wild, P, Zacharias, M, Hausch, F.
Deposit date:2013-06-20
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of the Free and Ligand-Bound FK1-FK2 Domain Segment of FKBP52 Reveal a Flexible Inter-Domain Hinge.
J.Mol.Biol., 425, 2013
4LIR
DownloadVisualize
BU of 4lir by Molmil
Crystal structure of a nucleoporin 35kDa (NUP35) from Homo sapiens at 2.46 A resolution
Descriptor: Nucleoporin NUP53
Authors:Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Deposit date:2013-07-03
Release date:2013-09-11
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of a nucleoporin 35kDa (NUP35) from Homo sapiens at 2.46 A resolution
To be published
4LIJ
DownloadVisualize
BU of 4lij by Molmil
Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution
Descriptor: Far upstream element-binding protein 1, PHOSPHATE ION
Authors:Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology, Partnership for T-Cell Biology (TCELL)
Deposit date:2013-07-02
Release date:2013-11-27
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution
To be published
3R4I
DownloadVisualize
BU of 3r4i by Molmil
Crystal structure of a Citrate lyase (Bxe_B2899) from BURKHOLDERIA XENOVORANS LB400 at 2.24 A resolution
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-03-17
Release date:2011-04-06
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structure of a Citrate lyase (Bxe_B2899) from BURKHOLDERIA XENOVORANS LB400 at 2.24 A resolution
To be published

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon