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2WME
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BU of 2wme by Molmil
Crystallographic structure of betaine aldehyde dehydrogenase from Pseudomonas aeruginosa
Descriptor: BETA-MERCAPTOETHANOL, BETAINE ALDEHYDE DEHYDROGENASE, GLYCEROL, ...
Authors:Gonzalez-Segura, L, Rudino-Pinera, E, Munoz-Clares, R.A, Horjales, E.
Deposit date:2009-06-30
Release date:2009-08-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of a Ternary Complex of Betaine Aldehyde Dehydrogenase from Pseudomonas Aeruginosa Provides New Insight Into the Reaction Mechanism and Shows a Novel Binding Mode of the 2'- Phosphate of Nadp(+) and a Novel Cation Binding Site.
J.Mol.Biol., 385, 2009
7R77
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BU of 7r77 by Molmil
Cryo-EM structure of DNMT5 binary complex with hemimethylated DNA
Descriptor: DNA (5'-D(P*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), DNA repair protein Rad8, ZINC ION
Authors:Wang, J, Patel, D.J.
Deposit date:2021-06-24
Release date:2022-02-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
3FSJ
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BU of 3fsj by Molmil
Crystal structure of benzoylformate decarboxylase in complex with the inhibitor MBP
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, Benzoylformate decarboxylase, CALCIUM ION
Authors:Brandt, G.S, Kenyon, G.L, McLeish, M.J, Jordan, F, Petsko, G.A, Ringe, D.
Deposit date:2009-01-09
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Snapshot of a reaction intermediate: analysis of benzoylformate decarboxylase in complex with a benzoylphosphonate inhibitor.
Biochemistry, 48, 2009
7R78
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BU of 7r78 by Molmil
cryo-EM structure of DNMT5 quaternary complex with hemimethylated DNA, AMP-PNP and SAH
Descriptor: DNA (5'-D(*TP*GP*CP*GP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(P*CP*AP*GP*(5CM)P*GP*CP*AP*T)-3'), DNA repair protein Rad8, ...
Authors:Wang, J, Patel, D.J.
Deposit date:2021-06-24
Release date:2022-02-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
5ZLH
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BU of 5zlh by Molmil
Crystal structure of Mn-ProtoporphyrinIX-reconstituted P450BM3
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, MANGANESE PROTOPORPHYRIN IX
Authors:Omura, K, Aiba, Y, Onoda, H, Sugimoto, H, Shoji, O, Watanabe, Y.
Deposit date:2018-03-28
Release date:2018-08-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Reconstitution of full-length P450BM3 with an artificial metal complex by utilising the transpeptidase Sortase A.
Chem. Commun. (Camb.), 54, 2018
2WLU
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BU of 2wlu by Molmil
Iron-bound crystal structure of Streptococcus pyogenes Dpr
Descriptor: DPS-LIKE PEROXIDE RESISTANCE PROTEIN, FE (III) ION, GLYCEROL, ...
Authors:Haikarainen, T, Tsou, C.-C, Wu, J.-J, Papageorgiou, A.C.
Deposit date:2009-06-26
Release date:2009-09-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structures of Streptococcus Pyogenes Dpr Reveal a Dodecameric Iron-Binding Protein with a Ferroxidase Site.
J.Biol.Inorg.Chem., 15, 2010
4RR4
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BU of 4rr4 by Molmil
Crystal structure of human dihydroorotate dehydrogenase (DHODH) with DH03A367
Descriptor: 2-chloro-N-[3-(4-{[(2Z)-2-cyano-3-cyclopropyl-3-hydroxyprop-2-enoyl]amino}phenoxy)phenyl]-4-methyl-1,3-thiazole-5-carboxamide, Dihydroorotate dehydrogenase (quinone), mitochondrial, ...
Authors:Zhu, L, Ren, X, Zhu, J, Li, H.
Deposit date:2014-11-06
Release date:2015-11-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of human dihydroorotate dehydrogenase (DHODH) with DH03A367
TO BE PUBLISHED
2X0A
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BU of 2x0a by Molmil
MPD-Lysozyme structure at 55.5 keV using a TRIXXEL CsI-aSi based digital imager and the new ESRF U22 undulator source at ID15
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, LYSOZYME C, ...
Authors:Jakoncic, J.
Deposit date:2009-12-07
Release date:2010-12-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A 75 Seconds Macromolecule Structure at 55.5 Kev
To be Published
4TNK
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BU of 4tnk by Molmil
RT XFEL structure of Photosystem II 250 microsec after the third illumination at 5.2 A resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (5.2 Å)
Cite:Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
2HE8
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BU of 2he8 by Molmil
Crystal structure of 17alpha-hydroxysteroid dehydrogenase in its apo-form
Descriptor: ACETATE ION, Aldo-keto reductase family 1, member C21, ...
Authors:Faucher, F, Pereira de Jesus-Tran, K, Cantin, L, Luu-the, V, Labrie, F, Breton, R.
Deposit date:2006-06-21
Release date:2006-12-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of Mouse 17alpha-Hydroxysteroid Dehydrogenase (Apoenzyme and Enzyme-NADP(H) Binary Complex): Identification of Molecular Determinants Responsible for the Unique 17alpha-reductive Activity of this Enzyme.
J.Mol.Biol., 364, 2006
6JKZ
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BU of 6jkz by Molmil
Crystal structure of VvPlpA from Vibrio vulnificus
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, Thermolabile hemolysin
Authors:Ma, Q, Wan, Y, Liu, C.
Deposit date:2019-03-03
Release date:2019-05-15
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.397 Å)
Cite:Structural analysis of aVibriophospholipase reveals an unusual Ser-His-chloride catalytic triad.
J.Biol.Chem., 294, 2019
7RG8
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BU of 7rg8 by Molmil
Crystal Structure of a Stable Heparanase Mutant
Descriptor: ACETATE ION, Heparanase 50 kDa subunit, Heparanase 8 kDa subunit, ...
Authors:Whitefield, C, Hong, N.S, Jackson, C.J.
Deposit date:2021-07-14
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Computational design and experimental characterisation of a stable human heparanase variant.
Rsc Chem Biol, 3, 2022
6E4V
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BU of 6e4v by Molmil
The Crystal Structure of FhuE from E. coli in complex with its substrate Coprogen
Descriptor: COPROGEN, FhuE receptor, octyl beta-D-glucopyranoside
Authors:Grinter, R, Lithgow, T.
Deposit date:2018-07-18
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Determination of the molecular basis for coprogen import by Gram-negative bacteria.
Iucrj, 6, 2019
6JIZ
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BU of 6jiz by Molmil
Apo structure of an imine reductase at 1.76 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 3-ethylheptane, 6-phosphogluconate dehydrogenase NAD-binding protein, ...
Authors:Li, H, Wu, L, Zheng, G.W, Zhou, J.H.
Deposit date:2019-02-24
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.763 Å)
Cite:Apo structure of an imine reductase at 1.76 Angstrom resolution
To Be Published
2WHM
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BU of 2whm by Molmil
Cellvibrio japonicus Man26A E121A and E320G double mutant in complex with mannobiose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ENDO-1,4-BETA MANNANASE, MAN26A, ...
Authors:Durcos, V.M.A, Davies, G.J, Flint, J.E, Gilbert, H.J.
Deposit date:2009-05-05
Release date:2009-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Understanding How Diverse -Mannanases Recognise Heterogeneous Substrates.
Biochemistry, 48, 2009
6JL2
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BU of 6jl2 by Molmil
Crystal structure of VvPlpA G389N from Vibrio vulnificus
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, HEXAETHYLENE GLYCOL, Thermolabile hemolysin
Authors:Ma, Q, Wan, Y, Liu, C.
Deposit date:2019-03-03
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of aVibriophospholipase reveals an unusual Ser-His-chloride catalytic triad.
J.Biol.Chem., 294, 2019
2WLY
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BU of 2wly by Molmil
Chitinase A from Serratia marcescens ATCC990 in complex with Chitotrio-thiazoline.
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-deoxy-2-(ethanethioylamino)-beta-D-glucopyranose, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, ...
Authors:Taylor, E.J, Dennis, R.J, Macdonald, J.M, Tarling, C.A, Knapp, S, Withers, S.G, Davies, G.J.
Deposit date:2009-06-29
Release date:2010-03-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chitinase inhibition by chitobiose and chitotriose thiazolines.
Angew. Chem. Int. Ed. Engl., 49, 2010
5Z1A
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BU of 5z1a by Molmil
The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Putative beta-galactosidase
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5YXT
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BU of 5yxt by Molmil
Crystal structure of reducing end xylose-releasing exo-oligoxylanase
Descriptor: Reducing end xylose-releasing exo-oligoxylanase
Authors:Jiang, Z.Q, You, X, Huang, P, Ma, J.W.
Deposit date:2017-12-07
Release date:2018-12-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of glycoside hydrolase family 8 xylanase at 1.88 Angstroms resolution
To Be Published
6JLL
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BU of 6jll by Molmil
XFEL structure of cyanobacterial photosystem II (2F state, dataset1)
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Suga, M, Shen, J.R.
Deposit date:2019-03-06
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
4RZB
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BU of 4rzb by Molmil
The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate, SOAKED WITH MERCURY
Descriptor: GLYCEROL, MERCURY (II) ION, N-[(E)-iminomethyl]-L-aspartic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
Deposit date:2014-12-19
Release date:2015-01-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Structure of N-Formimino-l-glutamate Iminohydrolase from Pseudomonas aeruginosa.
Biochemistry, 54, 2015
2HDJ
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BU of 2hdj by Molmil
Crystal structure of human type 3 3alpha-hydroxysteroid dehydrogenase in complex with NADP(H)
Descriptor: 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C2, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Faucher, F, Pereira de Jesus-Tran, K, Cantin, L, Luu-the, V, Labrie, F, Breton, R.
Deposit date:2006-06-20
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Mouse 17alpha-Hydroxysteroid Dehydrogenase (Apoenzyme and Enzyme-NADP(H) Binary Complex): Identification of Molecular Determinants Responsible for the Unique 17alpha-reductive Activity of this Enzyme.
J.Mol.Biol., 364, 2006
7VMA
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BU of 7vma by Molmil
The X-ray crystallographic structure of amylo-alpha-1,6-glucosidase from Thermococcus gammatolerans STB12
Descriptor: Amylo-alpha-1,6-glucosidase, putative archaeal type glycogen debranching enzyme (Gde)
Authors:Li, Z.F, Ban, X.F, Wang, Y.M, Li, C.M, Gu, Z.B.
Deposit date:2021-10-08
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:The X-ray Crystallographic Structure of Amylo-alpha-1,6-glucosidase from Thermococcus gannatilerans STB12
To Be Published
7RKM
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BU of 7rkm by Molmil
Structure of CX3CL1-US28-Gi-scFv16 in C-state
Descriptor: Antibody fragment scFv16, CHOLESTEROL, Fractalkine, ...
Authors:Tsutsumi, N, Qu, Q, Jude, K.M, Skiniotis, G, Garcia, K.C.
Deposit date:2021-07-22
Release date:2022-01-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Atypical structural snapshots of human cytomegalovirus GPCR interactions with host G proteins
Sci Adv, 8, 2022
2HEB
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BU of 2heb by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1997-09-16
Release date:1998-01-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997

224004

数据于2024-08-21公开中

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