PDB: 52677 resultsInfo pagesStatus searchChemie searchBIRD

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5TFC	Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with GTP Descriptor: Cystic fibrosis transmembrane conductance regulator, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION Authors: Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F. Deposit date: 2016-09-24 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.92 Å) Cite: Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain To Be Published
7TIO	B Domain of Staphylococcal protein A: Native backbone Descriptor: Immunoglobulin G binding protein A Authors: Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S. Deposit date: 2022-01-14 Release date: 2022-11-23 Method: SOLUTION NMR Cite: Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics. Chem Sci, 13, 2022
4RG7	Crystal structure of APC3 Descriptor: Cell division cycle protein 27 homolog Authors: Yamaguchi, M, Yu, S, Miller, D.J, Schulman, B.A. Deposit date: 2014-09-29 Release date: 2014-12-24 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (4.25 Å) Cite: Structure of an APC3-APC16 Complex: Insights into Assembly of the Anaphase-Promoting Complex/Cyclosome. J.Mol.Biol., 427, 2015
7TJ3	Crystal structure of a dihydrofolate reductase folA from Stenotrophomonas maltophilia bound to NADP and p218 Descriptor: 1,2-ETHANEDIOL, 3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid, Dihydrofolate reductase, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2022-01-14 Release date: 2022-11-23 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of a dihydrofolate reductase folA from Stenotrophomonas maltophilia bound to NADP and p218 To Be Published
7U60	Integrin alaphIIBbeta3 complex with cRGDfV Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ARG-GLY-ASP-DPN-VAL, ... Authors: Zhu, J, Lin, F.Y, Zhu, J, Springer, T.A. Deposit date: 2022-03-03 Release date: 2022-08-17 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.55 Å) Cite: A general chemical principle for creating closure-stabilizing integrin inhibitors. Cell, 185, 2022
4R3C	Crystal structure of p38 alpha MAP kinase in complex with a novel isoform selective drug candidate Descriptor: 4-[3-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL]PYRIDINE, 6-(4-methylpiperazin-1-yl)-3-(naphthalen-2-yl)-4-(pyridin-4-yl)pyridazine, CHLORIDE ION, ... Authors: Grum-Tokars, V.L, Minasov, G, Roy, S.M, Anderson, W.F, Watterson, D.M. Deposit date: 2014-08-14 Release date: 2015-02-25 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.06 Å) Cite: Targeting human central nervous system protein kinases: An isoform selective p38 alpha MAPK inhibitor that attenuates disease progression in Alzheimer's disease mouse models. ACS Chem Neurosci, 6, 2015
4QV6	yCP beta5-A49V mutant Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-14 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
4R71	Structure of the Qbeta holoenzyme complex in the P1211 crystal form Descriptor: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu, ... Authors: Gytz, H, Seweryn, P, Kutlubaeva, Z, Chetverin, A.B, Brodersen, D.E, Knudsen, C.R. Deposit date: 2014-08-26 Release date: 2015-09-23 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.21 Å) Cite: Structural basis for RNA-genome recognition during bacteriophage Q beta replication. Nucleic Acids Res., 43, 2015
4QW7	yCP beta5-M45T mutant in complex with carfilzomib Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-16 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
5CCC	wild-type E.coli dihydrofolate reductase complexed with 5,10-dideazatetrahydrofolate and oxidized nicotinamide adenine dinucleotide phosphate Descriptor: 5,10-DIDEAZATETRAHYDROFOLIC ACID, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Authors: Oyen, D, Wright, P.E. Deposit date: 2015-07-01 Release date: 2015-08-05 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Cofactor-Mediated Conformational Dynamics Promote Product Release From Escherichia coli Dihydrofolate Reductase via an Allosteric Pathway. J.Am.Chem.Soc., 137, 2015
4QXJ	yCP beta5-M45A mutant in complex with the epoxyketone inhibitor ONX 0914 Descriptor: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-21 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
4QZW	yCP beta5-C52F mutant in complex with the epoxyketone inhibitor ONX 0914 Descriptor: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-29 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
7TIR	Backbone-modified variant of the B domain of Staphylococcal protein A: beta3-residues in helix 3 Descriptor: Immunoglobulin G binding protein A Authors: Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S. Deposit date: 2022-01-14 Release date: 2022-12-21 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics. Chem Sci, 13, 2022
4XIU	Binary complex structure of Klenow fragment of Taq DNA polymerase I707L mutant with DNA containing TTT overhang Descriptor: DNA polymerase I, thermostable, MAGNESIUM ION, ... Authors: Wu, E.Y. Deposit date: 2015-01-07 Release date: 2015-01-21 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.5 Å) Cite: A Conservative Isoleucine to Leucine Mutation Causes Major Rearrangements and Cold Sensitivity in KlenTaq1 DNA Polymerase. Biochemistry, 54, 2015
7TIP	Backbone-modified variant of the B domain of Staphylococcal protein A: beta3-residues in helix 2 Descriptor: Immunoglobulin G binding protein A Authors: Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S. Deposit date: 2022-01-14 Release date: 2022-12-21 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics. Chem Sci, 13, 2022
7TIS	Backbone-modified variant of the B domain of Staphylococcal protein A: Aib residues in helix 3 Descriptor: Immunoglobulin G binding protein A Authors: Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S. Deposit date: 2022-01-14 Release date: 2022-12-21 Method: SOLUTION NMR Cite: Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics. Chem Sci, 13, 2022
7TIQ	Backbone-modified variant of the B domain of Staphylococcal protein A: Aib residues in helix 2 Descriptor: Immunoglobulin G binding protein A Authors: Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S. Deposit date: 2022-01-14 Release date: 2022-12-21 Method: SOLUTION NMR Cite: Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics. Chem Sci, 13, 2022
5TFD	Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with CTP Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION Authors: Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F. Deposit date: 2016-09-24 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.891 Å) Cite: Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain To Be Published
7TUV	Crystal structure of the exoribonucleolytic module of T. brucei RRP44 Descriptor: MAGNESIUM ION, RNA (5'-R(P*GP*GP*UP*U)-3'), Ribonuclease RRP44, ... Authors: Cesaro, G, Guimaraes, B.G. Deposit date: 2022-02-03 Release date: 2023-01-11 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.225 Å) Cite: Trypanosoma brucei RRP44: a versatile enzyme for processing structured and non-structured RNA substrates. Nucleic Acids Res., 51, 2023
7TZO	The apo structure of human mTORC2 complex Descriptor: Rapamycin-insensitive companion of mTOR, Serine/threonine-protein kinase mTOR, Target of rapamycin complex 2 subunit MAPKAP1, ... Authors: Yu, Z, Chen, J, Pearce, D. Deposit date: 2022-02-16 Release date: 2023-01-11 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.28 Å) Cite: Interactions between mTORC2 core subunits Rictor and mSin1 dictate selective and context-dependent phosphorylation of substrate kinases SGK1 and Akt. J.Biol.Chem., 298, 2022
7TJE	Bacteriophage Q beta capsid protein A38K Descriptor: Minor capsid protein A1 Authors: Jin, X. Deposit date: 2022-01-16 Release date: 2023-01-25 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.799 Å) Cite: Alternative Assembly of Q beta Virus-like Particles To Be Published
4QV1	yCP beta5-M45A mutant Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-14 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
4RGC	277K Crystal structure of Escherichia Coli dihydrofolate reductase Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ... Authors: Wilson, M.A, Wan, Q, Bennett, B.C, Dealwis, C. Deposit date: 2014-09-29 Release date: 2014-10-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.05 Å) Cite: Toward resolving the catalytic mechanism of dihydrofolate reductase using neutron and ultrahigh-resolution X-ray crystallography. Proc.Natl.Acad.Sci.USA, 111, 2014
7THR	Cryo-electron microscopy of Adeno-associated virus serotype 4 at 2.2 A Descriptor: Capsid, MAGNESIUM ION Authors: Zane, G.M, Silveria, M.A, Meyer, N.L, White, T.A, Chapman, M.S. Deposit date: 2022-01-11 Release date: 2023-01-25 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.21 Å) Cite: Cryo-EM structure of adeno-associated virus 4 at 2.2 angstrom resolution. Acta Crystallogr D Struct Biol, 79, 2023
4QW1	yCP beta5-A50V mutant in complex with bortezomib Descriptor: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-16 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015

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