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5K6O
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BU of 5k6o by Molmil
Structure of a GH3 b-glucosidase from cow rumen metagenome in complex with galactose
Descriptor: 1,2-ETHANEDIOL, B-GLUCOSIDASE, SULFATE ION, ...
Authors:Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2016-05-25
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural and Functional Characterization of a Ruminal beta-Glycosidase Defines a Novel Subfamily of Glycoside Hydrolase Family 3 with Permuted Domain Topology.
J.Biol.Chem., 291, 2016
7S6T
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BU of 7s6t by Molmil
Complex structure of Methane monooxygenase hydroxylase and regulatory subunit H33A
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ...
Authors:Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D.
Deposit date:2021-09-14
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics.
Biochemistry, 61, 2022
6WKS
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BU of 6wks by Molmil
Structure of SARS-CoV-2 nsp16/nsp10 in complex with RNA cap analogue (m7GpppA) and S-adenosylmethionine
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase, ADENOSINE, ...
Authors:Gupta, Y.K, Viswanathan, T, Arya, S, Qi, S, Misra, A, Chan, S.-H.
Deposit date:2020-04-16
Release date:2020-05-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of RNA cap modification by SARS-CoV-2.
Nat Commun, 11, 2020
6WUG
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BU of 6wug by Molmil
Crystal Structure of S. pombe Rai1 in complex with 3'-FADP
Descriptor: 1,2-ETHANEDIOL, Decapping nuclease din1, MAGNESIUM ION, ...
Authors:Doamekpor, S.K, Tong, L.
Deposit date:2020-05-04
Release date:2020-05-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:DXO/Rai1 enzymes remove 5'-end FAD and dephospho-CoA caps on RNAs.
Nucleic Acids Res., 48, 2020
6WZ6
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BU of 6wz6 by Molmil
Complex of mutant (K173M) of Pseudomonas 7A Glutaminase-Asparaginase with L-Glu at pH 5. Covalent acyl-enzyme intermediate
Descriptor: 1,2-ETHANEDIOL, GLUTAMIC ACID, Glutaminase-asparaginase
Authors:Strzelczyk, P, Zhang, D, Wlodawer, A, Lubkowski, J.
Deposit date:2020-05-13
Release date:2020-10-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Generalized enzymatic mechanism of catalysis by tetrameric L-asparaginases from mesophilic bacteria.
Sci Rep, 10, 2020
7PZ3
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BU of 7pz3 by Molmil
Structure of an LPMO at 5.37x10^3 Gy
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACRYLIC ACID, ...
Authors:Tandrup, T, Muderspach, S.J, Ipsen, J.O, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-11
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
8E4Y
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BU of 8e4y by Molmil
Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with 2-oxohexadecyl-CoA
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl hexadecanoate, Glycerol-3-phosphate acyltransferase 1, mitochondrial, ...
Authors:Johnson, Z.L, Wasilko, D.J, Ammirati, M, Chang, J.S, Han, S, Wu, H.
Deposit date:2022-08-19
Release date:2022-12-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of the acyl-transfer mechanism of human GPAT1.
Nat.Struct.Mol.Biol., 30, 2023
8R34
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BU of 8r34 by Molmil
CryoEM structure of the symmetric Pho90 dimer from yeast with substrates.
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Low-affinity phosphate transporter PHO90, PHOSPHATE ION, ...
Authors:Schneider, S, Kuehlbrandt, W, Yildiz, O.
Deposit date:2023-11-08
Release date:2024-04-24
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism.
Structure, 32, 2024
6XDK
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BU of 6xdk by Molmil
Crystal structure of Phosphoserine aminotransferase (SerC) from Stenotrophomonas maltophilia K279a
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-06-10
Release date:2020-06-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Phosphoserine aminotransferase (SerC) from Stenotrophomonas maltophilia K279a
to be published
6OZQ
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BU of 6ozq by Molmil
Crystal structure of Mus musculus (Mm) Endonuclease V (K155M) in complex with a 23mer RNA oligo containing an inosine after a 100 min soak in 10 mM Mn2+ and K+
Descriptor: 1,2-ETHANEDIOL, DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), Endonuclease V, ...
Authors:Samara, N.L, Yang, W.
Deposit date:2019-05-15
Release date:2019-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase.
Mol.Cell, 76, 2019
6PK2
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BU of 6pk2 by Molmil
CRYSTAL STRUCTURE OF THE CARBOXYLTRANSFERASE SUBUNIT OF ACC (ACCD6) IN COMPLEX WITH INHIBITOR QUIZALOFOP-P derivative FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor: 2-{4-[(6-fluoro-1,3-benzothiazol-2-yl)oxy]-2-hydroxyphenyl}-N-methylacetamide, Propionyl-CoA carboxylase subunit beta
Authors:Reddy, M.C.M, Nian, Z, Michele, T.C.B, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Elucidating the Inhibition and specificity of binding of herbicidal aryloxyphenoxypropionates derivatives to Mycobacterium tuberculosis carboxyltransferase domain of acetyl-coenzyme A(AccD6).
To Be Published
6QJY
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BU of 6qjy by Molmil
Solution NMR structure of a mutant major ampullate spidroin 1 N-terminal domain
Descriptor: Major ampullate spidroin 1
Authors:Goretzki, B, Heiby, J, Neuweiler, H, Hellmich, U.A.
Deposit date:2019-01-27
Release date:2019-09-11
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution NMR structure of a mutant major ampullate spidroin 1 N-terminal domain
Nat Commun, 2019
6VWS
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BU of 6vws by Molmil
Hexamer of Helical HIV capsid by RASTR method
Descriptor: HIV capsid protein
Authors:Zhao, H, Iqbal, N, Asturias, F, Kvaratskhelia, M, Vanblerkom, P.
Deposit date:2020-02-20
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.08 Å)
Cite:Structural and mechanistic bases for a potent HIV-1 capsid inhibitor.
Science, 370, 2020
6XWK
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BU of 6xwk by Molmil
Crystal structure of Phormidium rubidum phycocyanin
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IMIDAZOLE, ...
Authors:Sonani, R.R, Roszak, A.W, Cogdell, R.J, Madamwar, D, Liu, H, Gross, M.L, Blankenship, R.E.
Deposit date:2020-01-23
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Revisiting high-resolution crystal structure of Phormidium rubidum phycocyanin.
Photosyn. Res., 144, 2020
6XUC
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BU of 6xuc by Molmil
Structure of coproheme decarboxylase from Corynebacterium diphteriae in complex with coproheme
Descriptor: 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Chlorite dismutase
Authors:Michlits, H, Lier, B, Pfanzagl, V, Djinovic-Carugo, K, Furtmueller, P.G, Oostenbrink, C, Obinger, C, Hofbauer, S.
Deposit date:2020-01-17
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8702 Å)
Cite:Actinobacterial Coproheme Decarboxylases Use Histidine as a Distal Base to Promote Compound I Formation.
Acs Catalysis, 10, 2020
6XW7
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BU of 6xw7 by Molmil
Crystal structure of murine norovirus P domain in complex with Nanobody NB-5829 and glycochenodeoxycholate (GCDCA)
Descriptor: 1,2-ETHANEDIOL, Capsid protein, GLYCOCHENODEOXYCHOLIC ACID, ...
Authors:Kilic, T, Sabin, C, Hansman, G.
Deposit date:2020-01-23
Release date:2020-04-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nanobody-Mediated Neutralization Reveals an Achilles Heel for Norovirus.
J.Virol., 94, 2020
8RDK
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BU of 8rdk by Molmil
Crystal structure of human Haspin (GSG2) kinase bound to MD420
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-pyridin-4-yl-1~{H}-pyrrolo[3,2-g]isoquinoline, Serine/threonine-protein kinase haspin, ...
Authors:Kraemer, A, Defois, M, Giraud, F, Moreau, P, Anizon, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-12-08
Release date:2024-03-06
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and evaluation of chemical linchpins for highly selective CK2 alpha targeting.
Eur.J.Med.Chem., 276, 2024
6XK2
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BU of 6xk2 by Molmil
Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in complex with ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Ribokinase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-06-25
Release date:2020-07-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in complex with ADP
to be published
1FDG
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BU of 1fdg by Molmil
BINDING OF A MACROCYCLIC BISACRIDINE AND AMETANTRONE TO CGTACG INVOLVES SIMILAR UNUSUAL INTERCALATION PLATFORMS (AMETANTRONE COMPLEX)
Descriptor: 1,4-BIS-[2-(2-HYDROXY-ETHYLAMINO)-ETHYLAMINO]-ANTHRAQUINONE, COBALT (II) ION, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), ...
Authors:Yang, X.-L, Robinson, H, Gao, Y.-G, Wang, A.H.-J.
Deposit date:2000-07-20
Release date:2000-08-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Binding of a macrocyclic bisacridine and ametantrone to CGTACG involves similar unusual intercalation platforms.
Biochemistry, 39, 2000
9B3A
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BU of 9b3a by Molmil
filament of type 1 KD-mxyl miniature tau macrocycle derived from 4R tauopathic fold
Descriptor: 1,3-dimethylbenzene, AMINO GROUP, Microtubule-associated protein tau, ...
Authors:Xu, X, Angera, J.I, Rajewski, H.B, Jiang, W, Del Valle, R.J.
Deposit date:2024-03-18
Release date:2025-03-26
Last modified:2025-10-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Macrocyclic beta-arch peptides that mimic the structure and function of disease-associated tau folds.
Nat.Chem., 17, 2025
9GY9
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BU of 9gy9 by Molmil
The Cryo-EM structure of bacterial beta-1,3-glucan phosphorylase from family GH161
Descriptor: beta-1,3-glucan phosphorylase
Authors:Cioci, G, Cooper, N, Ladeveze, S, Shayan, R.
Deposit date:2024-10-02
Release date:2025-10-15
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:The Cryo-EM structure of bacterial beta-1,3-glucan phosphorylase from family GH161
To Be Published
8HAU
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BU of 8hau by Molmil
NARROW LEAF 1 from Indica
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1
Authors:Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M.
Deposit date:2022-10-26
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:NARROW LEAF 1 from Indica
To Be Published
5YZ1
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BU of 5yz1 by Molmil
Crystal structure of human Archease
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Protein archease
Authors:Duan, S.Y, Li, J.X.
Deposit date:2017-12-11
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of human archease, a key cofactor of tRNA splicing ligase complex.
Int.J.Biochem.Cell Biol., 122, 2020
9H5P
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BU of 9h5p by Molmil
Crystal structure of Thermoanaerobacterales bacterium monoamine oxidase in complex with putrescine
Descriptor: 1,4-DIAMINOBUTANE, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Basile, L, Poli, C, Santema, L.L, Lesenciuc, R.C, Fraaije, M.W, Binda, C.
Deposit date:2024-10-23
Release date:2025-01-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Altering substrate specificity of a thermostable bacterial monoamine oxidase by structure-based mutagenesis.
Arch.Biochem.Biophys., 764, 2024
377D
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BU of 377d by Molmil
5'-R(*CP*GP*UP*AP*CP*DG)-3'
Descriptor: RNA-DNA (5'-R(*CP*GP*UP*AP*CP*DG)-3')
Authors:Biswas, R, Mitra, S.N, Sundaralingam, M.
Deposit date:1998-01-26
Release date:1998-08-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:1.76 A structure of a pyrimidine start alternating A-RNA hexamer r(CGUAC)dG.
Acta Crystallogr.,Sect.D, 54, 1998

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