PDB: 46200 resultsInfo pagesStatus searchChemie searchBIRD

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6G1B	Corynebacterium glutamicum OxyR, oxidized form Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, FORMIC ACID, HYDROGEN PEROXIDE, ... Authors: Young, D.R, Pedre, B.P, Messens, J.M. Deposit date: 2018-03-21 Release date: 2018-12-05 Last modified: 2018-12-19 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6G4R	Corynebacterium glutamicum OxyR C206S mutant, H2O2-bound Descriptor: 1,2-ETHANEDIOL, HYDROGEN PEROXIDE, Hydrogen peroxide-inducible genes activator, ... Authors: Young, D.R, Pedre, B.P, Messens, J.M. Deposit date: 2018-03-28 Release date: 2018-12-05 Last modified: 2018-12-19 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6G1D	Corynebacterium glutamicum OxyR C206 mutant Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ... Authors: Young, D.R, Pedre, B.P, Messens, J.M. Deposit date: 2018-03-21 Release date: 2018-12-05 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.992 Å) Cite: Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5E0T	Human PCNA mutant - S228I Descriptor: Proliferating cell nuclear antigen Authors: Duffy, C.M, Hilbert, B.J, Kelch, B.A. Deposit date: 2015-09-29 Release date: 2016-04-20 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.6653 Å) Cite: A Disease-Causing Variant in PCNA Disrupts a Promiscuous Protein Binding Site. J.Mol.Biol., 428, 2016
2KHL	Refined solution structure of Methanosarcina thermophila protein MC1 Descriptor: Chromosomal protein MC1 Authors: Paquet, F, Meudal, H, Culard, F, Lancelot, G. Deposit date: 2009-04-08 Release date: 2009-05-12 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Refined solution structure and backbone dynamics of the archaeal MC1 protein Febs J., 277, 2010
3BPX	Crystal Structure of MarR Descriptor: 2-HYDROXYBENZOIC ACID, SODIUM ION, Transcriptional regulator Authors: Saridakis, V, Shahinas, D, Xu, X, Christendat, D. Deposit date: 2007-12-19 Release date: 2008-05-20 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural insight on the mechanism of regulation of the MarR family of proteins: high-resolution crystal structure of a transcriptional repressor from Methanobacterium thermoautotrophicum. J.Mol.Biol., 377, 2008
3OYB	Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI MK2048 Descriptor: (6S)-2-(3-chloro-4-fluorobenzyl)-8-ethyl-10-hydroxy-N,6-dimethyl-1,9-dioxo-1,2,6,7,8,9-hexahydropyrazino[1',2':1,5]pyrrolo[2,3-d]pyridazine-4-carboxamide, AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.54 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
3OYI	Crystal structure of the PFV S217Q mutant intasome in complex with manganese Descriptor: AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.72 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
3OYK	Crystal structure of the PFV S217H mutant intasome bound to manganese Descriptor: AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.72 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
8QTO	CRYSTAL STRUCTURE OF HOLO-L28H-FNR OF A. FISCHERI Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FNR type regulator, IRON/SULFUR CLUSTER Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2023-10-13 Release date: 2023-11-29 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Probing the Reactivity of [4Fe-4S] Fumarate and Nitrate Reduction (FNR) Regulator with O2 and NO: Increased O2 Resistance and Relative Specificity for NO of the [4Fe-4S] L28H FNR Cluster Inorganics (Basel), 11, 2023
3OYJ	Crystal structure of the PFV S217Q mutant intasome in complex with magnesium and the INSTI MK2048 Descriptor: (6S)-2-(3-chloro-4-fluorobenzyl)-8-ethyl-10-hydroxy-N,6-dimethyl-1,9-dioxo-1,2,6,7,8,9-hexahydropyrazino[1',2':1,5]pyrrolo[2,3-d]pyridazine-4-carboxamide, AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.68 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
6P4W	XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution Descriptor: CHLORIDE ION, DNA-dependent ATPase XPBII, Endonuclease Bax1, ... Authors: Fan, L, He, F, DuPrez, K.T. Deposit date: 2019-05-28 Release date: 2020-06-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.956 Å) Cite: XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution To Be Published
3OYD	Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI GS9160 Descriptor: AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.54 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
3OYL	Crystal structure of the PFV S217H mutant intasome bound to magnesium and the INSTI MK2048 Descriptor: (6S)-2-(3-chloro-4-fluorobenzyl)-8-ethyl-10-hydroxy-N,6-dimethyl-1,9-dioxo-1,2,6,7,8,9-hexahydropyrazino[1',2':1,5]pyrrolo[2,3-d]pyridazine-4-carboxamide, AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.54 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
3OYE	Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI Compound2 Descriptor: AMMONIUM ION, DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'), ... Authors: Hare, S, Cherepanov, P. Deposit date: 2010-09-23 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Molecular mechanisms of retroviral integrase inhibition and the evolution of viral resistance. Proc.Natl.Acad.Sci.USA, 107, 2010
6P4O	Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA-dependent ATPase XPBII, ... Authors: Fan, L, DuPrez, K.T. Deposit date: 2019-05-28 Release date: 2020-06-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution To Be Published
5FHF	Crystal structure of Bacteroides sp Pif1 in complex with ADP-AlF4 Descriptor: ADENOSINE-5'-DIPHOSPHATE, TETRAFLUOROALUMINATE ION, Uncharacterized protein Authors: Zhou, X, Ren, W, Bharath, S.R, Song, H. Deposit date: 2015-12-22 Release date: 2016-03-30 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1 Cell Rep, 14, 2016
3PQK	Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa Descriptor: Biofilm growth-associated repressor Authors: Benedetti, C.E, Guimaraes, B.G. Deposit date: 2010-11-26 Release date: 2011-06-01 Last modified: 2011-08-03 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia. J.Biol.Chem., 286, 2011
7PUA	Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit Descriptor: 30S Ribosomal protein S17, putative, 30S ribosomal protein S8, ... Authors: Lenarcic, T, Leibundgut, M, Saurer, M, Ramrath, D.J.F, Fluegel, T, Boehringer, D, Ban, N. Deposit date: 2021-09-29 Release date: 2022-03-02 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Mitoribosomal small subunit maturation involves formation of initiation-like complexes. Proc.Natl.Acad.Sci.USA, 119, 2022
5CKT	Crystal Structure of KorA, a plasmid-encoded, global transcription regulator Descriptor: ACETATE ION, TrfB transcriptional repressor protein Authors: White, S.A, Hyde, E.I, Lovering, A.L. Deposit date: 2015-07-15 Release date: 2016-04-06 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator. Nucleic Acids Res., 44, 2016
6VLZ	Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) Descriptor: 12s rRNA, 16s rRNA, 28S ribosomal protein S10, ... Authors: Sharma, M.R, Koripella, R.K, Agrawal, R.K. Deposit date: 2020-01-27 Release date: 2020-08-05 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.97 Å) Cite: Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation. Nat Commun, 11, 2020
6SJ7	Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to RBM39 and Indisulam Descriptor: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, ... Authors: Srinivas, H. Deposit date: 2019-08-12 Release date: 2019-12-18 Last modified: 2019-12-25 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex. Nat.Chem.Biol., 16, 2020
6Y8P	Crystal structure of SNAP-tag labeled with a benzyl-tetramethylrhodamine fluorophore Descriptor: 1,2-ETHANEDIOL, O6-alkylguanine-DNA alkyltransferase mutant, ZINC ION, ... Authors: Gotthard, G, Tanzer, T, Johnsson, K, Hiblot, J. Deposit date: 2020-03-05 Release date: 2021-03-31 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
3PQJ	Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa Descriptor: Biofilm growth-associated repressor Authors: Guimaraes, B.G, Benedetti, C.E. Deposit date: 2010-11-26 Release date: 2011-06-01 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia. J.Biol.Chem., 286, 2011
8XGW	Solution structure of d(CGATCG)2-Baicalein complex Descriptor: 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one, DNA (5'-D(*CP*AP*CP*GP*TP*G)-3') Authors: Nair, M.S, Kumar, S. Deposit date: 2023-12-15 Release date: 2024-02-07 Last modified: 2024-06-26 Method: SOLUTION NMR Cite: Solution structure of d(CACGTG)2-Baicalein complex. To Be Published

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