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3ZHL
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BU of 3zhl by Molmil
The crystal structure of single domain antibody 8-14 scaffold
Descriptor: GLYCEROL, MG8-14 SCAFFOLD ANTIBODY
Authors:Song, H.-N, Woo, E.-J, Lim, H.-K.
Deposit date:2012-12-22
Release date:2014-01-08
Last modified:2014-07-16
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Directed Evolution of Human Heavy Chain Variable Domain (Vh) Using in Vivo Protein Fitness Filter.
Plos One, 9, 2014
43CA
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BU of 43ca by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY WITH BOUND P-NITROPHENOL
Descriptor: P-NITROPHENOL, PROTEIN (IMMUNOGLOBULIN (HEAVY CHAIN)), PROTEIN (IMMUNOGLOBULIN (LIGHT CHAIN))
Authors:Thayer, M.M, Getzoff, E.D, Roberts, V.A.
Deposit date:1999-03-10
Release date:1999-08-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
J.Mol.Biol., 291, 1999
43C9
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BU of 43c9 by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY
Descriptor: PROTEIN (IMMUNOGLOBULIN (HEAVY CHAIN)), PROTEIN (IMMUNOGLOBULIN (LIGHT CHAIN))
Authors:Thayer, M.M, Getzoff, E.D, Roberts, V.A.
Deposit date:1999-03-10
Release date:1999-08-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
J.Mol.Biol., 291, 1999
4AIZ
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BU of 4aiz by Molmil
Crystallographic structure of 3mJL2 from the germinal line lambda 3
Descriptor: 1,5:6,10-dianhydro-3,4,7,8-tetradeoxy-2,9-bis-C-(hydroxymethyl)-L-manno-decitol, CITRIC ACID, SULFATE ION, ...
Authors:Villalba, M.I, Luna, O.D, Rudino-Pinera, E, Sanchez, R, Sanchez-Lopez, R, Rojas-Trejo, S, Olamendi-Portugal, T, Fernandez-Velasco, D.A, Becerril, B.
Deposit date:2012-02-15
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Site-Directed Mutagenesis Reveals Regions Implicated in the Stability and Fiber Formation of Human Lambda3R Light Chains.
J.Biol.Chem., 290, 2015
1TVD
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BU of 1tvd by Molmil
VARIABLE DOMAIN OF T CELL RECEPTOR DELTA CHAIN
Descriptor: T CELL RECEPTOR
Authors:Li, H.M, Lebedeva, M.I, Llera, A.S, Fields, B.A, Brenner, M.B, Mariuzza, R.A.
Deposit date:1997-10-19
Release date:1998-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Vdelta domain of a human gammadelta T-cell antigen receptor.
Nature, 391, 1998
1U9K
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BU of 1u9k by Molmil
Crystal Structure of Mouse Triggering Receptor Expressed on Myeloid Cells 1 (TREM-1) at 1.76
Descriptor: ZINC ION, triggering receptor expressed on myeloid cells 1
Authors:Kelker, M.S, Debler, E.W, Wilson, I.A.
Deposit date:2004-08-09
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal Structure of Mouse Triggering Receptor Expressed on Myeloid Cells 1 (TREM-1) at 1.76A
J.Mol.Biol., 344, 2004
1URL
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BU of 1url by Molmil
N-TERMINAL DOMAIN OF SIALOADHESIN (MOUSE) IN COMPLEX WITH GLYCOPEPTIDE
Descriptor: ALA-GLY-HIS-THR-TRP-GLY-HIA, N-acetyl-alpha-neuraminic acid, SIALOADHESIN
Authors:Bukrinsky, J.T, Hilaire, P.M.S, Meldal, M, Crocker, P.R, Henriksen, A.
Deposit date:2003-10-31
Release date:2004-10-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complex of Sialoadhesin with a Glycopeptide Ligand
Biochim.Biophys.Acta, 1702, 2004
1VER
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BU of 1ver by Molmil
Structure of New Antigen Receptor variable domain from sharks
Descriptor: New Antigen Receptor variable domain
Authors:Streltsov, V.A.
Deposit date:2004-04-05
Release date:2004-08-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structural evidence for evolution of shark Ig new antigen receptor variable domain antibodies from a cell-surface receptor
Proc.Natl.Acad.Sci.USA, 101, 2004
1VFA
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BU of 1vfa by Molmil
BOUND WATER MOLECULES AND CONFORMATIONAL STABILIZATION HELP MEDIATE AN ANTIGEN-ANTIBODY ASSOCIATION
Descriptor: IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN)
Authors:Bhat, T.N, Poljak, R.J.
Deposit date:1993-12-03
Release date:1994-05-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bound water molecules and conformational stabilization help mediate an antigen-antibody association.
Proc.Natl.Acad.Sci.USA, 91, 1994
1VES
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BU of 1ves by Molmil
Structure of New Antigen Receptor variable domain from sharks
Descriptor: New Antigen Receptor variable domain
Authors:Streltsov, V.A.
Deposit date:2004-04-05
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural evidence for evolution of shark Ig new antigen receptor variable domain antibodies from a cell-surface receptor
Proc.Natl.Acad.Sci.USA, 101, 2004
1WZ1
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BU of 1wz1 by Molmil
Crystal structure of the Fv fragment complexed with dansyl-lysine
Descriptor: Ig heavy chain, Ig light chain, N~6~-{[5-(DIMETHYLAMINO)-1-NAPHTHYL]SULFONYL}-L-LYSINE
Authors:Nakasako, M, Oka, T, Mashumo, M, Takahashi, H, Shimada, I, Yamaguchi, Y, Kato, K, Arata, Y.
Deposit date:2005-02-21
Release date:2006-01-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Conformational dynamics of complementarity-determining region H3 of an anti-dansyl Fv fragment in the presence of its hapten
J.Mol.Biol., 351, 2005
4DFI
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BU of 4dfi by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 mutant FAMP
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
1WTL
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BU of 1wtl by Molmil
COMPARISON OF CRYSTAL STRUCTURES OF TWO HOMOLOGOUS PROTEINS: STRUCTURAL ORIGIN OF ALTERED DOMAIN INTERACTIONS IN IMMUNOGLOBULIN LIGHT CHAIN DIMERS
Descriptor: BENCE-JONES PROTEIN MCG (LIGHT CHAIN)
Authors:Huang, D.B, Chang, C.H, Schiffer, M.
Deposit date:1994-06-08
Release date:1994-11-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparison of crystal structures of two homologous proteins: structural origin of altered domain interactions in immunoglobulin light-chain dimers.
Biochemistry, 33, 1994
4DFH
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BU of 4dfh by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 variable domain
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
1XED
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BU of 1xed by Molmil
Crystal Structure of a Ligand-Binding Domain of the Human Polymeric Ig Receptor, pIgR
Descriptor: MAGNESIUM ION, Polymeric-immunoglobulin receptor
Authors:Hamburger, A.E, West Jr, A.P, Bjorkman, P.J.
Deposit date:2004-09-10
Release date:2004-11-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a Polymeric Immunoglobulin Binding Fragment of the Human Polymeric Immunoglobulin Receptor
Structure, 12, 2004
1XT5
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BU of 1xt5 by Molmil
Crystal Structure of VCBP3, domain 1, from Branchiostoma floridae
Descriptor: SULFATE ION, variable region-containing chitin-binding protein 3
Authors:Hernandez Prada, J.A, Haire, R.N, Cannon, J.P, Allaire, M, Jakoncic, J, Stojanoff, V, Litman, G.W, Ostrov, D.A.
Deposit date:2004-10-21
Release date:2005-10-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Ancient evolutionary origin of diversified variable regions demonstrated by crystal structures of an immune-type receptor in amphioxus.
Nat.Immunol., 7, 2006
4F8T
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BU of 4f8t by Molmil
Crystal Structure of the Human BTN3A3 Ectodomain
Descriptor: Butyrophilin subfamily 3 member A3
Authors:Palakodeti, A, Sandstrom, A, Sundaresan, L, Harly, C, Nedellec, S, Olive, D, Scotet, E, Bonneville, M, Adams, E.J.
Deposit date:2012-05-17
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:The molecular basis for modulation of human V(gamma)9V(delta)2 T cell response by CD277/Butryophilin (BTN3A)-specific antibodies
J.Biol.Chem., 287, 2012
4F9L
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BU of 4f9l by Molmil
Crystal Structure of the Human BTN3A1 Ectodomain in Complex with the 20.1 Single Chain Antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 20.1 anti-BTN3A1 antibody fragment, Butyrophilin subfamily 3 member A1
Authors:Palakodeti, A, Sandstrom, A, Sundaresan, L, Harly, C, Nedellec, S, Olive, D, Scotet, E, Bonneville, M, Adams, E.J.
Deposit date:2012-05-18
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1404 Å)
Cite:The molecular basis for modulation of human V(gamma)9V(delta)2 T cell responses by CD277/Butyrophilin-3 (BTN3A)-specific antibodies
J.Biol.Chem., 287, 2012
4F80
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BU of 4f80 by Molmil
Crystal Structure of the human BTN3A1 ectodomain
Descriptor: Butyrophilin subfamily 3 member A1
Authors:Palakodeti, A, Sandstrom, A, Sundaresan, L, Harly, C, Nedellec, S, Olive, D, Scotet, E, Bonneville, M, Adams, E.J.
Deposit date:2012-05-16
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.944 Å)
Cite:The molecular basis for modulation of human V(gamma)9V(delta)2 T cell responses by CD277/Butyrophilin-3 (BTN3A)-specific antibodies
J.Biol.Chem., 287, 2012
4F9P
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BU of 4f9p by Molmil
Crystal Structure of the Human BTN3A1 Ectodomain in Complex with the 103.2 Single Chain Antibody
Descriptor: 103.2 anti-BTN3A1 antibody fragment, Butyrophilin subfamily 3 member A1
Authors:Palakodeti, A, Sandstrom, A, Sundaresan, L, Harly, C, Nedellec, S, Olive, D, Scotet, E, Bonneville, M, Adams, E.J.
Deposit date:2012-05-19
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.519 Å)
Cite:The molecular basis for modulation of human V(gamma)9V(delta)2 T cell responses by CD277/Butyrophilin-3 (BTN3A)-specific antibodies
J.Biol.Chem., 287, 2012
1Z9M
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BU of 1z9m by Molmil
Crystal Structure of Nectin-like molecule-1 protein Domain 1
Descriptor: GAPA225
Authors:Dong, X, Xu, F, Gong, Y, Gao, J, Lin, P, Chen, T, Peng, Y, Qiang, B, Yuan, J, Peng, X, Rao, Z.
Deposit date:2005-04-03
Release date:2006-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the V Domain of Human Nectin-like Molecule-1/Syncam3/Tsll1/Igsf4b, a Neural Tissue-specific Immunoglobulin-like Cell-Cell Adhesion Molecule
J.Biol.Chem., 281, 2006
4F8Q
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BU of 4f8q by Molmil
Crystal Structure of the Human BTN3A2 Ectodomain
Descriptor: Butyrophilin subfamily 3 member A2
Authors:Palakodeti, A, Sandstrom, A, Sundaresan, L, Harly, C, Nedellec, S, Olive, D, Scotet, E, Bonneville, M, Adams, E.J.
Deposit date:2012-05-17
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3789 Å)
Cite:The molecular basis for modulation of human V(gamma)9V(delta)2 T cell responses by CD277/Butyrophilin-3 (BTN3A)-specific antibodies
J.Biol.Chem., 287, 2012
1ZOX
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BU of 1zox by Molmil
CLM-1 Mouse Myeloid Receptor Extracellular Domain
Descriptor: CLM-1
Authors:Nelson, C.N, Burton, R.L, Fremont, D.H, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-05-15
Release date:2005-05-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Mouse CLM-1 Ectodomain
To be Published
3J7E
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BU of 3j7e by Molmil
Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments
Descriptor: H16.V5 Fab heavy chain, H16.V5 Fab light chain
Authors:Lee, H, Brendle, S.A, Bywaters, S.M, Christensen, N.D, Hafenstein, S.
Deposit date:2014-06-23
Release date:2014-11-26
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (13.6 Å)
Cite:A cryo-electron microscopy study identifies the complete H16.V5 epitope and reveals global conformational changes initiated by binding of the neutralizing antibody fragment.
J.Virol., 89, 2015
3KAA
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BU of 3kaa by Molmil
Structure of Tim-3 in complex with phosphatidylserine
Descriptor: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, CALCIUM ION, Hepatitis A virus cellular receptor 2
Authors:Ballesteros, A, Santiago, C, Casasnovas, J.M.
Deposit date:2009-10-19
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:T cell/transmembrane, Ig, and mucin-3 allelic variants differentially recognize phosphatidylserine and mediate phagocytosis of apoptotic cells.
J.Immunol., 184, 2010

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