Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7XBX
DownloadVisualize
BU of 7xbx by Molmil
Cryo-EM structure of the human chemokine receptor CX3CR1 in complex with CX3CL1 and Gi1
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Lu, M, Zhao, W, Han, S, Zhu, Y, Wu, B, Zhao, Q.
Deposit date:2022-03-22
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Activation of the human chemokine receptor CX3CR1 regulated by cholesterol.
Sci Adv, 8, 2022
2L9U
DownloadVisualize
BU of 2l9u by Molmil
Spatial structure of dimeric ErbB3 transmembrane domain
Descriptor: Receptor tyrosine-protein kinase erbB-3
Authors:Mineev, K.S, Arseniev, A.S.
Deposit date:2011-02-24
Release date:2011-05-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Spatial structure and dimer--monomer equilibrium of the ErbB3 transmembrane domain in DPC micelles.
Biochim. Biophys. Acta, 1808, 2011
2MDL
DownloadVisualize
BU of 2mdl by Molmil
Structure and NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)
Descriptor: Anti-lipopolysaccharide factor
Authors:Sharma, S, Barnwal, R, Yedery, R, Reddy, K.
Deposit date:2013-09-11
Release date:2014-09-17
Method:SOLUTION NMR
Cite:NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)
To be Published
2MHR
DownloadVisualize
BU of 2mhr by Molmil
STRUCTURE OF MYOHEMERYTHRIN IN THE AZIDOMET STATE AT 1.7(SLASH)1.3 ANGSTROMS RESOLUTION
Descriptor: AZIDE ION, MU-OXO-DIIRON, MYOHEMERYTHRIN, ...
Authors:Sheriff, S, Hendrickson, W.A.
Deposit date:1987-04-20
Release date:1987-10-16
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of myohemerythrin in the azidomet state at 1.7/1.3 A resolution.
J.Mol.Biol., 197, 1987
2PHK
DownloadVisualize
BU of 2phk by Molmil
THE CRYSTAL STRUCTURE OF A PHOSPHORYLASE KINASE PEPTIDE SUBSTRATE COMPLEX: KINASE SUBSTRATE RECOGNITION
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Lowe, E.D, Noble, M.E.M, Skamnaki, V.T, Oikonomakos, N.G, Owen, D.J, Johnson, L.N.
Deposit date:1998-06-18
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of a phosphorylase kinase peptide substrate complex: kinase substrate recognition.
EMBO J., 16, 1997
2LY4
DownloadVisualize
BU of 2ly4 by Molmil
HMGB1-facilitated p53 DNA binding occurs via HMG-box/p53 transactivation domain interaction and is regulated by the acidic tail
Descriptor: Cellular tumor antigen p53, High mobility group protein B1
Authors:Rowell, J.P, Simpson, K.L, Stott, K, Watson, M, Thomas, J.O.
Deposit date:2012-09-12
Release date:2012-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:HMGB1-Facilitated p53 DNA Binding Occurs via HMG-Box/p53 Transactivation Domain Interaction, Regulated by the Acidic Tail.
Structure, 20, 2012
2Q7D
DownloadVisualize
BU of 2q7d by Molmil
Crystal Structure of Human Inositol 1,3,4-Trisphosphate 5/6-kinase (ITPK1) in complex with AMPPNP and Mn2+
Descriptor: Inositol-tetrakisphosphate 1-kinase, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Chamberlain, P.P, Lesley, S.A, Spraggon, G.
Deposit date:2007-06-06
Release date:2007-07-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Integration of inositol phosphate signaling pathways via human ITPK1.
J.Biol.Chem., 282, 2007
6IFN
DownloadVisualize
BU of 6ifn by Molmil
Crystal structure of Type III-A CRISPR Csm complex
Descriptor: MANGANESE (II) ION, RNA (32-MER), Type III-A CRISPR-associated RAMP protein Csm3, ...
Authors:You, L, Wang, J, Wang, Y.
Deposit date:2018-09-20
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference
Cell, 176, 2019
6E2U
DownloadVisualize
BU of 6e2u by Molmil
MDDEF in complex with MVAPP, AMPPCP and Magnesium
Descriptor: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, MAGNESIUM ION, Mevalonate diphosphate decarboxylase, ...
Authors:Stauffacher, C.V, Chen, C.-L.
Deposit date:2018-07-12
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase.
Nat Commun, 11, 2020
3H5N
DownloadVisualize
BU of 3h5n by Molmil
Crystal structure of E. coli MccB + ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MccB protein, ...
Authors:Regni, C.A, Roush, R.F, Miller, D, Nourse, A, Walsh, C.T, Schulman, B.A.
Deposit date:2009-04-22
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:How the MccB bacterial ancestor of ubiquitin E1 initiates biosynthesis of the microcin C7 antibiotic.
Embo J., 28, 2009
6IJI
DownloadVisualize
BU of 6iji by Molmil
Crystal structure of PDE10 in complex with inhibitor 2b
Descriptor: 2-{2-[5-methyl-1-(pyridin-4-yl)-1H-benzimidazol-2-yl]ethyl}-1H-benzo[de]isoquinoline-1,3(2H)-dione, MAGNESIUM ION, ZINC ION, ...
Authors:Huang, Y.Y, Yu, Y.F, Zhang, C, Wu, D, Wu, Y, Luo, H.B.
Deposit date:2018-10-10
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Validation of Phosphodiesterase-10 as a Novel Target for Pulmonary Arterial Hypertension via Highly Selective and Subnanomolar Inhibitors.
J. Med. Chem., 62, 2019
6E32
DownloadVisualize
BU of 6e32 by Molmil
Capsid protein of PCV2 with N,O6-DISULFO-GLUCOSAMINE
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-13
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
3H5R
DownloadVisualize
BU of 3h5r by Molmil
Crystal structure of E. coli MccB + Succinimide
Descriptor: MccB protein, Microcin C7 analog, SULFATE ION, ...
Authors:Regni, C.A, Roush, R.F, Miller, D, Nourse, A, Walsh, C.T, Schulman, B.A.
Deposit date:2009-04-22
Release date:2009-06-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How the MccB bacterial ancestor of ubiquitin E1 initiates biosynthesis of the microcin C7 antibiotic.
Embo J., 28, 2009
2RNJ
DownloadVisualize
BU of 2rnj by Molmil
NMR Structure of The S. Aureus VraR DNA Binding Domain
Descriptor: Response regulator protein vraR
Authors:Donaldson, L.W.
Deposit date:2008-01-09
Release date:2008-01-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The NMR Structure of the Staphylococcus aureus Response Regulator VraR DNA Binding Domain Reveals a Dynamic Relationship between It and Its Associated Receiver Domain
Biochemistry, 47, 2008
6E34
DownloadVisualize
BU of 6e34 by Molmil
Capsid protein of PCV2 with N,O6-DISULFO-GLUCOSAMINE and 2-O-sulfo-alpha-L-idopyranuronic acid
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-13
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
6E39
DownloadVisualize
BU of 6e39 by Molmil
Capsid protein of PCV2 with 2-O-sulfo-alpha-L-idopyranuronic acid and N,O6-DISULFO-GLUCOSAMINE
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-13
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
6E30
DownloadVisualize
BU of 6e30 by Molmil
Mechanism of cellular recognition by PCV2
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
6E2X
DownloadVisualize
BU of 6e2x by Molmil
Mechanism of cellular recognition by PCV2
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
3HI8
DownloadVisualize
BU of 3hi8 by Molmil
Crystal structure of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii
Descriptor: Proliferating cell nuclear antigen PcnA
Authors:Morgunova, E, Gray, F.C, MacNeill, S.A, Ladenstein, R.
Deposit date:2009-05-19
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Structural insights into the adaptation of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii to a high-salt environment.
Acta Crystallogr.,Sect.D, 65, 2009
3PXN
DownloadVisualize
BU of 3pxn by Molmil
Crystal structure of the Drosophila kinesin family member Kin10/NOD in complex with divalent manganese and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein Nod, MANGANESE (II) ION
Authors:Cochran, J.C, Zhao, Y.C, Wilcox, D.E, Kull, F.J.
Deposit date:2010-12-10
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A metal switch for controlling the activity of molecular motor proteins.
Nat.Struct.Mol.Biol., 19, 2012
6E2Z
DownloadVisualize
BU of 6e2z by Molmil
Mechanism of cellular recognition by PCV2
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
Authors:Khayat, R, Dhindwal, S.
Deposit date:2018-07-12
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
5UGF
DownloadVisualize
BU of 5ugf by Molmil
Crystal structure of human purine nucleoside phosphorylase (F159Y) mutant complexed with DADMe-ImmG and phosphate
Descriptor: 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Harijan, R.K, Cameron, S.A, Bonanno, J.B, Almo, S.C, Schramm, V.L.
Deposit date:2017-01-08
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Catalytic-site design for inverse heavy-enzyme isotope effects in human purine nucleoside phosphorylase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6FCU
DownloadVisualize
BU of 6fcu by Molmil
The X-ray Structure of Lytic Transglycosylase Slt inactive mutant E503Q from Pseudomonas aeruginosa in complex with 4(NAG-NAMpentapeptide)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-3-O-[(2R)-1-amino-1-oxopropan-2-yl]-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, ACETATE ION, ALANINE, ...
Authors:Batuecas, M.T, Dominguez-Gil, T, Hermoso, J.A.
Deposit date:2017-12-21
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Exolytic and endolytic turnover of peptidoglycan by lytic transglycosylase Slt ofPseudomonas aeruginosa.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2TMD
DownloadVisualize
BU of 2tmd by Molmil
CORRELATION OF X-RAY DEDUCED AND EXPERIMENTAL AMINO ACID SEQUENCES OF TRIMETHYLAMINE DEHYDROGENASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Mathews, F.S, Lim, L.W, White, S.
Deposit date:1993-10-15
Release date:1994-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Correlation of x-ray deduced and experimental amino acid sequences of trimethylamine dehydrogenase.
J.Biol.Chem., 267, 1992
8KCQ
DownloadVisualize
BU of 8kcq by Molmil
Solution structures of the N-terminal divergent caplonin homology (NN-CH) domains of human intraflagellar transport protein 54
Descriptor: TRAF3-interacting protein 1
Authors:Dang, W, Kuwasako, K, He, F, Takahashi, M, Tsuda, K, Nagata, T, Tanaka, A, Kobayashi, N, Kigawa, T, Guentert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2023-08-08
Release date:2024-05-22
Method:SOLUTION NMR
Cite:1 H, 13 C, and 15 N resonance assignments and solution structure of the N-terminal divergent calponin homology (NN-CH) domain of human intraflagellar transport protein 54.
Biomol.Nmr Assign., 18, 2024

225946

건을2024-10-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon