6E39

Capsid protein of PCV2 with 2-O-sulfo-alpha-L-idopyranuronic acid and N,O6-DISULFO-GLUCOSAMINE

This is a large structure.

Summary for 6E39

EMDB information8939 8969 8970 8971 8972 8973 8974 8975
DescriptorCapsid protein of PCV2, 2-O-sulfo-alpha-L-idopyranuronic acid, N,O6-DISULFO-GLUCOSAMINE (3 entities in total)
Functional Keywordsviral jelly-roll, virus like particle
Biological sourcePorcine circovirus 2 (PCV2)
Total number of polymer chains60
Total molecular weight1674601.2
Authors
Khayat, R.,Dhindwal, S. (deposition date: 2018-07-13, release date: 2018-12-26, Last modification date: 2019-12-18)
Primary citation
Dhindwal, S.,Avila, B.,Feng, S.,Khayat, R.
Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93:-, 2019
PubMed: 30602608 (PDB entries with the same primary citation)
DOI: 10.1128/JVI.02222-18
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
?

Structure validation

ClashscoreRamachandran outliersSidechain outliers20 4.0%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
Download full validation report