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7YJG
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Crystal structure of the P450 BM3 heme domain mutant F87A/T268V/A82C/L181M in complex with N-imidazolyl-pentanoyl-L-phenylalanine and hydroxylamine
Descriptor: (2~{S})-2-(5-imidazol-1-ylpentanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
Authors:Dong, S, Chen, J, Jiang, Y, Cong, Z, Feng, Y.
Deposit date:2022-07-20
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.684 Å)
Cite:Regiodivergent and Enantioselective Hydroxylation of C-H bonds by Synergistic Use of Protein Engineering and Exogenous Dual-Functional Small Molecules.
Angew.Chem.Int.Ed.Engl., 62, 2023
8QJL
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BU of 8qjl by Molmil
SmNuc1 nuclease from Stenotrophomonas maltophilia
Descriptor: GLYCEROL, S1/P1 Nuclease, SULFATE ION, ...
Authors:Adamkova, K, Koval, T, Kolenko, P, Dohnalek, J.
Deposit date:2023-09-13
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Substrate preference, RNA binding and active site versatility of Stenotrophomonas maltophilia nuclease SmNuc1, explained by a structural study.
Febs J., 2024
7YJH
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BU of 7yjh by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87V/T268I in complex with N-imidazolyl-pentanoyl-L-phenylalanine and hydroxylamine
Descriptor: (2~{S})-2-(5-imidazol-1-ylpentanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
Authors:Dong, S, Chen, J, Jiang, Y, Cong, Z, Feng, Y.
Deposit date:2022-07-20
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Regiodivergent and Enantioselective Hydroxylation of C-H bonds by Synergistic Use of Protein Engineering and Exogenous Dual-Functional Small Molecules.
Angew.Chem.Int.Ed.Engl., 62, 2023
7MK6
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BU of 7mk6 by Molmil
KcsA open gate E71V mutant with sodium
Descriptor: Fab heavy chain, Fab light chain, pH-gated potassium channel KcsA
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-04-21
Release date:2022-03-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
5UBB
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BU of 5ubb by Molmil
Crystal structure of human alpha N-terminal protein methyltransferase 1B
Descriptor: Alpha N-terminal protein methyltransferase 1B, S-ADENOSYLMETHIONINE, UNKNOWN ATOM OR ION
Authors:Dong, C, Zhu, L, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-12-20
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:An asparagine/glycine switch governs product specificity of human N-terminal methyltransferase NTMT2.
Commun Biol, 1, 2018
6LU5
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BU of 6lu5 by Molmil
Crystal structure of BPTF-BRD with ligand DCBPin5 bound
Descriptor: 6-(1H-indol-5-yl)-N-methyl-2-methylsulfonyl-pyrimidin-4-amine, Nucleosome-remodeling factor subunit BPTF
Authors:Lu, T, Lu, H.B, Wang, J, Lin, H, Lu, W, Luo, C.
Deposit date:2020-01-25
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.86527729 Å)
Cite:Discovery and Optimization of Small-Molecule Inhibitors for the BPTF Bromodomains Proteins
To Be Published
7MHR
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BU of 7mhr by Molmil
KcsA E71V closed gate with K+
Descriptor: Fab heavy chain, Fab light chain, POTASSIUM ION, ...
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-04-15
Release date:2022-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
7OLB
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BU of 7olb by Molmil
Crystal structure of Pab-AGOG, an 8-oxoguanine DNA glycosylase from Pyrococcus abyssi
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ...
Authors:Coste, F, Goffinont, S, Flament, D, Castaing, B.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural and functional determinants of the archaeal 8-oxoguanine-DNA glycosylase AGOG for DNA damage recognition and processing.
Nucleic Acids Res., 50, 2022
8K9X
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BU of 8k9x by Molmil
Crystal structure of plasmodium LysRS complexing with ASP3026 derived LysRS inhibitor 5 (ADKI5)
Descriptor: (2~{S})-2,6-bis(azanyl)-~{N}-[3-[2-[[4-[(2,5-dimethoxyphenyl)amino]-1,3,5-triazin-2-yl]amino]phenyl]sulfonylpropyl]hexanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lysine--tRNA ligase
Authors:Zhou, J, Xia, M, Yang, G, Li, P, Fang, P.
Deposit date:2023-08-01
Release date:2024-06-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure-guided conversion from an anaplastic lymphoma kinase inhibitor into Plasmodium lysyl-tRNA synthetase selective inhibitors.
Commun Biol, 7, 2024
8JS5
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BU of 8js5 by Molmil
Dimeric PAS domains of oxygen sensor FixL with ferric unliganded heme
Descriptor: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein FixL
Authors:Kamaya, M, Koteishi, H, Sawai, H, Sugimoto, H, Shiro, Y.
Deposit date:2023-06-19
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Dimeric PAS domains of oxygen sensor FixL in complex with imidazole-bound heme.
To be published
7MHX
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BU of 7mhx by Molmil
KcsA E71V closed gate with Ba2+
Descriptor: BARIUM ION, DIACYL GLYCEROL, Fab heavy chain, ...
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-04-15
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
6LU6
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BU of 6lu6 by Molmil
Crystal structure of BPTF-BRD with ligand DCBPin5-2 bound
Descriptor: 6-[1-[3-(dimethylamino)propyl]indol-5-yl]-2-methylsulfonyl-N-propyl-pyrimidin-4-amine, Nucleosome-remodeling factor subunit BPTF
Authors:Lu, T, Lu, H.B, Wang, J, Lin, H, Lu, W, Luo, C.
Deposit date:2020-01-26
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.970063 Å)
Cite:Discovery and Optimization of Small-Molecule Inhibitors for the BPTF Bromodomains Proteins
To Be Published
7UTT
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BU of 7utt by Molmil
Structure of Non-hydrolyzable ATP (ApCpp) binds to Cyclic GMP AMP synthase (cGAS) through Mn coordination
Descriptor: Cyclic GMP-AMP synthase, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MANGANESE (II) ION, ...
Authors:Wu, S, Gabelli, S.B, Sohn, J.
Deposit date:2022-04-27
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of Non-hydrolyzable ATP (ApCpp) binds to Cyclic GMP AMP synthase (cGAS) through Mn coordination
To Be Published
7OIW
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BU of 7oiw by Molmil
Structure of S. aureus Rel catalytic domains in complex with pppGpp
Descriptor: GLYCEROL, GTP pyrophosphokinase, IODIDE ION, ...
Authors:Garcia-Pino, A.
Deposit date:2021-05-12
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure of S. aureus Rel catalytic domains in complex with pppGpp
To Be Published
7UU0
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BU of 7uu0 by Molmil
Crystal structure of the BRD2-BD2 in complex with a ligand
Descriptor: 1,2-ETHANEDIOL, Isoform 3 of Bromodomain-containing protein 2, methyl (7S)-7-(thiophen-2-yl)-1,4-thiazepane-4-carboxylate
Authors:Kalra, P, Shi, K, Aihara, H, Pomerantz, W.C.K.
Deposit date:2022-04-28
Release date:2023-05-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BRD2-BD2 in complex with a ligand
To Be Published
7UUX
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BU of 7uux by Molmil
ATP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
Authors:Wu, S, Gabelli, S.B, Sohn, J.
Deposit date:2022-04-29
Release date:2023-05-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS
Nat Commun, 15, 2024
7MJT
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BU of 7mjt by Molmil
KcsA open gate E71V mutant with Barium
Descriptor: BARIUM ION, Fab heavy chain, Fab light chain, ...
Authors:Rohaim, A, Li, J, Weingarth, M, Roux, B.
Deposit date:2021-04-20
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A distinct mechanism of C-type inactivation in the Kv-like KcsA mutant E71V.
Nat Commun, 13, 2022
5UBI
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BU of 5ubi by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound PRPP
Descriptor: 1,2-ETHANEDIOL, 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ACETATE ION, ...
Authors:Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
Deposit date:2016-12-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
7XRB
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BU of 7xrb by Molmil
human STK19 dimer
Descriptor: CHLORIDE ION, Isoform 2 of Serine/threonine-protein kinase 19, SULFATE ION
Authors:Sun, Q, Li, Y.
Deposit date:2022-05-10
Release date:2023-06-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:human STK19 dimer
To Be Published
7OMR
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BU of 7omr by Molmil
Crystal structure of coelenteramide-bound Renilla reniformis luciferase RLuc8-D162A variant
Descriptor: Coelenterazine h 2-monooxygenase, GLYCEROL, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE
Authors:Schenkmayerova, A, Marek, M.
Deposit date:2021-05-24
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Catalytic mechanism for Renilla-type luciferases
Nat Catal, 2023
7P7N
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BU of 7p7n by Molmil
X-RAY CRYSTAL STRUCTURE OF SPOROSARCINA PASTEURII UREASE INHIBITED BY THE GOLD(I)-PHOSPHINE COMPOUND Au(PEt3)I DETERMINED AT 1.80 ANGSTROMS
Descriptor: 1,2-ETHANEDIOL, GOLD ION, NICKEL (II) ION, ...
Authors:Mazzei, L, Ciurli, S.
Deposit date:2021-07-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Medicinal Au(I) compounds targeting urease as prospective antimicrobial agents: unveiling the structural basis for enzyme inhibition.
Dalton Trans, 50, 2021
8QVZ
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BU of 8qvz by Molmil
Human NDPK-C in complex with cAMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.774 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
7M56
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BU of 7m56 by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with 7-((3-(3-aminophenethyl)phenoxy)methyl)quinolin-2-amine
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, 7-({3-[2-(6-aminopyridin-2-yl)ethyl]phenoxy}methyl)quinolin-2-amine, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2021-03-22
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.957 Å)
Cite:Inhibition of bacterial nitric oxide synthase as an antimicrobial tool in fighting some antibiotic-resistant pathogens
To be published
6M1C
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BU of 6m1c by Molmil
Crystal structure of RsmD methyltransferase of M. tuberculosis in complex with sinefungin reveals key interactions
Descriptor: ACETATE ION, Possible methyltransferase (Methylase), SINEFUNGIN
Authors:Bijpuria, S, Khan, S.H, Kumar, A, Taneja, B.
Deposit date:2020-02-25
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of RsmD methyltransferase of M. tuberculosis in complex with sinefungin reveals key interactions
To Be Published
7UG8
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BU of 7ug8 by Molmil
Crystal structure of a solute receptor from Synechococcus CC9311 in complex with alpha-ketovaleric and calcium
Descriptor: 1,2-ETHANEDIOL, 2-oxopentanoic acid, CALCIUM ION, ...
Authors:Shah, B.S, Mikolajek, H, Orr, C.M, Mykhaylyk, V, Owens, R.J, Paulsen, I.T.
Deposit date:2022-03-24
Release date:2023-04-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Crystal structure of a solute receptor from Synechococcus CC9311 in complex with alpha-ketovaleric and calcium
To Be Published

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