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3C2E
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Crystal structure at 1.9A of the apo quinolinate phosphoribosyl transferase (BNA6) from Saccharomyces cerevisiae
Descriptor: Nicotinate-nucleotide pyrophosphorylase
Authors:di Luccio, E, Wilson, D.K.
Deposit date:2008-01-24
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comprehensive X-ray Structural Studies of the Quinolinate Phosphoribosyl Transferase (BNA6) from Saccharomyces cerevisiae.
Biochemistry, 47, 2008
4FE2
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X-Ray Structure of SAICAR Synthetase (PurC) from Streptococcus pneumoniae complexed with AIR, ADP, Asp and Mg2+
Descriptor: 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wolf, N, Abad-Zapatero, C, Johnson, M.E, Fung, L.M.-W.
Deposit date:2012-05-29
Release date:2013-05-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.288 Å)
Cite:Structures of SAICAR synthetase (PurC) from Streptococcus pneumoniae with ADP, Mg(2+), AIR and Asp.
Acta Crystallogr.,Sect.D, 70, 2014
4EW2
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The structure of human glycinamide ribonucleotide transformylase in complex with 10S-methylthio-DDATHF.
Descriptor: N-({4-[(1S)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid, PHOSPHATE ION, SULFATE ION, ...
Authors:Connelly, S, DeMartino, K, Boger, D.L, Wilson, I.A.
Deposit date:2012-04-26
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Biological and Structural Evaluation of 10R- and 10S-Methylthio-DDACTHF Reveals a New Role for Sulfur in Inhibition of Glycinamide Ribonucleotide Transformylase.
Biochemistry, 52, 2013
1KUT
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Structural Genomics, Protein TM1243, (SAICAR synthetase)
Descriptor: Phosphoribosylaminoimidazole-succinocarboxamide synthase
Authors:Zhang, R, Skarina, T, Beasley, S, Edwards, A, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-01-22
Release date:2002-08-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of SAICAR synthase from Thermotoga maritima at 2.2 angstroms reveals an unusual covalent dimer.
Acta Crystallogr.,Sect.F, 62, 2006
1IBJ
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Crystal structure of cystathionine beta-lyase from Arabidopsis thaliana
Descriptor: CARBONATE ION, CYSTATHIONINE BETA-LYASE, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Breitinger, U, Clausen, T, Messerschmidt, A.
Deposit date:2001-03-28
Release date:2001-04-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The three-dimensional structure of cystathionine beta-lyase from Arabidopsis and its substrate specificity
Plant Physiol., 126, 2001
2O4C
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Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
Descriptor: Erythronate-4-phosphate dehydrogenase, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Ha, J.Y, Lee, J.H, Kim, K.H, Kim, D.J, Lee, H.H, Kim, H.K, Yoon, H.J, Suh, S.W.
Deposit date:2006-12-04
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of d-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
J.Mol.Biol., 366, 2007
2NTM
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Crystal structure of PurO from Methanothermobacter thermoautotrophicus
Descriptor: IMP cyclohydrolase
Authors:Kang, Y.N, Tran, A, White, R.H, Ealick, S.E.
Deposit date:2006-11-07
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase.
Biochemistry, 46, 2007
2NTL
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Crystal structure of PurO/AICAR from Methanothermobacter thermoautotrophicus
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, IMP cyclohydrolase
Authors:Kang, Y.N, Tran, A, White, R.H, Ealick, S.E.
Deposit date:2006-11-07
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase.
Biochemistry, 46, 2007
2NTK
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Crystal structure of PurO/IMP from Methanothermobacter thermoautotrophicus
Descriptor: IMP cyclohydrolase, INOSINIC ACID
Authors:Kang, Y.N, Tran, A, White, R.H, Ealick, S.E.
Deposit date:2006-11-07
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase.
Biochemistry, 46, 2007
2QK4
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Human glycinamide ribonucleotide synthetase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Lehtio, L, Welin, M, Arrowsmith, C.H, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Herman, M.D, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Moche, M, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-07-10
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural studies of tri-functional human GART.
Nucleic Acids Res., 38, 2010
2IU0
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crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Descriptor: 1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, POTASSIUM ION
Authors:Xu, L, Chong, Y, Hwang, I, Onofrio, A.D, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A.
Deposit date:2006-05-26
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structure-Based Design, Synthesis, Evaluation, and Crystal Structures of Transition State Analogue Inhibitors of Inosine Monophosphate Cyclohydrolase
J.Biol.Chem., 282, 2007
2IU3
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Crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Descriptor: 1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, POTASSIUM ION
Authors:Xu, L, Chong, Y, Hwang, I, D'Onofrio, A, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A.
Deposit date:2006-05-27
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based design, synthesis, evaluation, and crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase.
J. Biol. Chem., 282, 2007
3QW3
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Structure of Leishmania donovani OMP decarboxylase
Descriptor: Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (Ompdcase-oprtase, putative), ...
Authors:French, J.B, Ealick, S.E.
Deposit date:2011-02-26
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Leishmania donovani UMP synthase is essential for promastigote viability and has an unusual tetrameric structure that exhibits substrate-controlled oligomerization.
J.Biol.Chem., 286, 2011
2GQR
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SAICAR Synthetase Complexed with ADP-Mg2+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole-succinocarboxamide synthase
Authors:Ginder, N.D, Honzatko, R.B.
Deposit date:2006-04-21
Release date:2006-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nucleotide Complexes of Escherichia coli Phosphoribosylaminoimidazole Succinocarboxamide Synthetase.
J.Biol.Chem., 281, 2006
2GQS
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BU of 2gqs by Molmil
SAICAR Synthetase Complexed with CAIR-Mg2+ and ADP
Descriptor: 5-AMINO-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLIC ACID, ADENOSINE-5'-DIPHOSPHATE, FORMIC ACID, ...
Authors:Ginder, N.D, Honzatko, R.B.
Deposit date:2006-04-21
Release date:2006-05-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Nucleotide Complexes of Escherichia coli Phosphoribosylaminoimidazole Succinocarboxamide Synthetase.
J.Biol.Chem., 281, 2006
3E9K
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BU of 3e9k by Molmil
Crystal structure of Homo sapiens kynureninase-3-hydroxyhippuric acid inhibitor complex
Descriptor: 3-Hydroxyhippuric acid, Kynureninase, PYRIDOXAL-5'-PHOSPHATE
Authors:Lima, S, Kumar, S, Gawandi, V, Momany, C, Phillips, R.S.
Deposit date:2008-08-22
Release date:2008-12-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the Homo sapiens kynureninase-3-hydroxyhippuric acid inhibitor complex: insights into the molecular basis of kynureninase substrate specificity.
J.Med.Chem., 52, 2009
3ETJ
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BU of 3etj by Molmil
Crystal structure E. coli Purk in complex with Mg, ADP, and Pi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, HYDROGENPHOSPHATE ION, ...
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the active site geometry of N(5)-Carboxyaminoimidazole ribonucleotide synthetase from Escherichia coli.
Biochemistry, 47, 2008
3DEZ
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Crystal structure of Orotate phosphoribosyltransferase from Streptococcus mutans
Descriptor: Orotate phosphoribosyltransferase, SULFATE ION
Authors:Liu, C.P, Gao, Z.Q, Hou, H.F, Li, L.F, Su, X.D, Dong, Y.H.
Deposit date:2008-06-11
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of orotate phosphoribosyltransferase from the caries pathogen Streptococcus mutans
Acta Crystallogr.,Sect.F, 66, 2010
3ETH
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BU of 3eth by Molmil
Crystal structure of E. coli Purk in complex with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole carboxylase ATPase subunit
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the active site geometry of N(5)-Carboxyaminoimidazole ribonucleotide synthetase from Escherichia coli.
Biochemistry, 47, 2008
6XSS
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BU of 6xss by Molmil
CryoEM structure of designed helical fusion protein C4_nat_HFuse-7900
Descriptor: C4_nat_HFuse-7900
Authors:Redler, R.L, Edman, N.I, Baker, D, Ekiert, D, Bhabha, G.
Deposit date:2020-07-16
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Design of multi-scale protein complexes by hierarchical building block fusion.
Nat Commun, 12, 2021
6XT4
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C3_HD-1069 (1BH-69) - fusion protein of helical bundle and repeat protein
Descriptor: 1BH_69
Authors:Bick, M.J, Hsia, Y, Sankaran, B, Baker, D.
Deposit date:2020-07-17
Release date:2020-12-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design of multi-scale protein complexes by hierarchical building block fusion.
Nat Commun, 12, 2021
6XNS
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C3_crown-05
Descriptor: C3_crown-05
Authors:Bick, M.J, Hsia, Y, Sankaran, B, Baker, D.
Deposit date:2020-07-04
Release date:2020-12-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Design of multi-scale protein complexes by hierarchical building block fusion.
Nat Commun, 12, 2021
5IEN
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BU of 5ien by Molmil
Structure of CDL2.2, a computationally designed Vitamin-D3 binder
Descriptor: 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, CDL2.2, GLYCEROL
Authors:Stoddard, B.L, Doyle, L.A.
Deposit date:2016-02-25
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.089 Å)
Cite:Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold.
Protein Eng.Des.Sel., 31, 2018
5IEO
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Structure of CDL2.3a, a computationally designed Vitamin-D3 binder
Descriptor: 1,2-ETHANEDIOL, 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, CDL2.3a
Authors:Stoddard, B.L, Doyle, L.A.
Deposit date:2016-02-25
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold.
Protein Eng.Des.Sel., 31, 2018
2RT4
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NMR Structure of designed protein, AF.2A1, (Ensembles)
Descriptor: AF.2A1
Authors:Watanabe, H, Yamasaki, K, Honda, S.
Deposit date:2013-04-18
Release date:2014-01-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Tracing primordial protein evolution through structurally guided stepwise segment elongation.
J.Biol.Chem., 289, 2014

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