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4XO4
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BU of 4xo4 by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Methionine
Descriptor: Aminopeptidase N, GLYCEROL, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-16
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal Structure of E. coli Aminopeptidase N in complex with L-Methionine
To Be Published
4XN8
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BU of 4xn8 by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Alanine
Descriptor: ALANINE, Aminopeptidase N, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of E. coli Aminopeptidase N in complex with L-Alanine
To Be Published
3Q43
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BU of 3q43 by Molmil
X-ray crystal structure of PfA-M1 bound to bestatin derivative 15
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:McGowan, S, Greenbaum, D.C.
Deposit date:2010-12-22
Release date:2011-03-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis of new (-)-bestatin-based inhibitor libraries reveals a novel binding mode in the s1 pocket of the essential malaria m1 metalloaminopeptidase.
J.Med.Chem., 54, 2011
4XN2
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BU of 4xn2 by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Leucine
Descriptor: Aminopeptidase N, GLYCEROL, LEUCINE, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Leucine
To Be Published
4XN4
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BU of 4xn4 by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Methionine
Descriptor: Aminopeptidase N, GLYCEROL, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Methionine
To Be Published
3Q44
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BU of 3q44 by Molmil
X-ray crystal structure of PfA-M1 bound to Bestatin derivative 16
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:McGowan, S, Greenbaum, D.C.
Deposit date:2010-12-22
Release date:2011-03-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis of new (-)-bestatin-based inhibitor libraries reveals a novel binding mode in the s1 pocket of the essential malaria m1 metalloaminopeptidase.
J.Med.Chem., 54, 2011
3PUU
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BU of 3puu by Molmil
Crystal Structure of Glu121Gln mutant of E. coli Aminopeptidase N
Descriptor: Aminopeptidase N, GLYCEROL, SULFATE ION, ...
Authors:Addlagatta, A.
Deposit date:2010-12-06
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery of alpha, beta- and alpha, gamma-Diamino Acid Scaffolds for the Inhibition of M1 Family Aminopeptidases
Chemmedchem, 6, 2011
3QJX
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BU of 3qjx by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Serine
Descriptor: Aminopeptidase N, GLYCEROL, MALONATE ION, ...
Authors:Addlagatta, A, Gumpena, R, Kishor, C, Ganji, R.J.
Deposit date:2011-01-31
Release date:2011-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of alpha, beta- and alpha, gamma-Diamino Acid Scaffolds for the Inhibition of M1 Family Aminopeptidases
Chemmedchem, 6, 2011
3Q7J
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BU of 3q7j by Molmil
Engineered Thermoplasma Acidophilum F3 factor mimics human aminopeptidase N (APN) as a target for anticancer drug development
Descriptor: L-phenylalanyl-N6-[(benzyloxy)carbonyl]-N1-hydroxy-L-lysinamide, Tricorn protease-interacting factor F3, ZINC ION
Authors:Su, J, Wang, Q, Feng, J, Zhang, C, Zhu, D, We, T, Xu, W, Gu, L.
Deposit date:2011-01-05
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Engineered Thermoplasma acidophilum factor F3 mimics human aminopeptidase N (APN) as a target for anticancer drug development
Bioorg.Med.Chem., 19, 2011
3QNF
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BU of 3qnf by Molmil
Crystal structure of the open state of human endoplasmic reticulum aminopeptidase 1 ERAP1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, ZINC ION, ...
Authors:Vollmar, M, Kochan, G, Krojer, T, Harvey, D, Chaikuad, A, Allerston, C, Muniz, J.R.C, Raynor, J, Ugochukwu, E, Berridge, G, Wordsworth, B.P, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Kavanagh, K, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2011-02-08
Release date:2011-02-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of the endoplasmic reticulum aminopeptidase-1 (ERAP1) reveal the molecular basis for N-terminal peptide trimming.
Proc.Natl.Acad.Sci.USA, 108, 2011
7V9Q
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BU of 7v9q by Molmil
Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in open state
Descriptor: Alanine aminopeptidase, ZINC ION
Authors:Zhao, C, Zhao, N.L, Bao, R.
Deposit date:2021-08-26
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Conformational remodeling enhances activity of lanthipeptide zinc-metallopeptidases.
Nat.Chem.Biol., 18, 2022
7V9O
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BU of 7v9o by Molmil
Crystal structure of the lanthipeptide zinc-metallopeptidase EryP mutant E802R from saccharopolyspora erythraea
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alanine aminopeptidase, ZINC ION
Authors:Zhao, C, Zhao, N.L, Bao, R.
Deposit date:2021-08-26
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Conformational remodeling enhances activity of lanthipeptide zinc-metallopeptidases.
Nat.Chem.Biol., 18, 2022
7V9P
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BU of 7v9p by Molmil
Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in intermediate state
Descriptor: Alanine aminopeptidase, ZINC ION
Authors:Zhao, C, Zhao, N.L, Bao, R.
Deposit date:2021-08-26
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational remodeling enhances activity of lanthipeptide zinc-metallopeptidases.
Nat.Chem.Biol., 18, 2022
7V9N
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BU of 7v9n by Molmil
Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in closed state
Descriptor: ACETATE ION, Alanine aminopeptidase, CALCIUM ION, ...
Authors:Zhao, C, Zhao, N.L, Bao, R.
Deposit date:2021-08-26
Release date:2022-05-11
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational remodeling enhances activity of lanthipeptide zinc-metallopeptidases.
Nat.Chem.Biol., 18, 2022
6KP1
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BU of 6kp1 by Molmil
Crystal structure of two domain M1 zinc metallopeptidase E323A mutant bound to L-methionine amino acid
Descriptor: METHIONINE, SODIUM ION, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KP0
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BU of 6kp0 by Molmil
Crystal structure of two domain M1 zinc metallopeptidase E323A mutant bound to L-arginine
Descriptor: ARGININE, SODIUM ION, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KOZ
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BU of 6koz by Molmil
Crystal structure of two domain M1 zinc metallopeptidase E323 mutant bound to L-Leucine amino acid
Descriptor: LEUCINE, SODIUM ION, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6KOY
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BU of 6koy by Molmil
Crystal structure of two domain M1 Zinc metallopeptidase E323A mutant bound to L-tryptophan amino acid
Descriptor: TRYPTOPHAN, ZINC ION, Zinc metalloprotease
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2019-08-13
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
7VPP
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BU of 7vpp by Molmil
Structures of a deltacoronavirus spike protein bound to porcine and human receptors indicate the risk of virus adaptation to humans
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ji, W, Xu, Y, Zhang, S.
Deposit date:2021-10-17
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structures of a deltacoronavirus spike protein bound to porcine and human receptors.
Nat Commun, 13, 2022
7VPQ
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BU of 7vpq by Molmil
Structures of a deltacoronavirus spike protein bound to porcine and human receptors indicate the risk of virus adaptation to humans
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ji, W, Xu, Y, Zhang, S.
Deposit date:2021-10-17
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of a deltacoronavirus spike protein bound to porcine and human receptors.
Nat Commun, 13, 2022
6IFF
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BU of 6iff by Molmil
Crystal structure of M1 zinc metallopeptidase E323A mutant from Deinococcus radiodurans
Descriptor: SODIUM ION, TYROSINE, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Kumar, A, Gaur, N.K, Makde, R.D.
Deposit date:2018-09-20
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.
Int.J.Biol.Macromol., 147, 2020
6M8P
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BU of 6m8p by Molmil
Human ERAP1 bound to phosphinic pseudotripeptide inhibitor DG013
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, Nalpha-[(2S)-2-{[[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]methyl}-4-methylpentanoyl]-L-tryptophanamide, ...
Authors:Maben, Z, Stern, L.J.
Deposit date:2018-08-22
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Conformational dynamics linked to domain closure and substrate binding explain the ERAP1 allosteric regulation mechanism.
Nat Commun, 12, 2021
6MGQ
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BU of 6mgq by Molmil
ERAP1 in the open conformation bound to 10mer phosphinic inhibitor DG014
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, Phosphinic inhibitor DG014, ...
Authors:Stern, L.J, Maben, Z.
Deposit date:2018-09-14
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Conformational dynamics linked to domain closure and substrate binding explain the ERAP1 allosteric regulation mechanism.
Nat Commun, 12, 2021
7Z28
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BU of 7z28 by Molmil
High-resolution crystal structure of ERAP1 with bound bestatin analogue inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Giastas, P, Papakyriakou, A, Stratikos, E, Vourloumis, D.
Deposit date:2022-02-26
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Selective Nanomolar Inhibitors for Insulin-Regulated Aminopeptidase Based on alpha-Hydroxy-beta-amino Acid Derivatives of Bestatin.
J.Med.Chem., 65, 2022
5MFT
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BU of 5mft by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-1-bromo-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017

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