PDB: 41646 resultsInfo pagesStatus searchChemie searchBIRD

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6E51	Crystal structure of the apo domain-swapped dimer Q108K:K40L:T51W mutant of human cellular retinol binding protein II Descriptor: Retinol-binding protein 2 Authors: Ghanbarpour, A, Geiger, J. Deposit date: 2018-07-19 Release date: 2019-10-16 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.256 Å) Cite: Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches. J.Am.Chem.Soc., 141, 2019
6E50	Crystal structure of the apo domain-swapped dimer Q108K:K40L:T51F mutant of human Cellular Retinol Binding Protein II Descriptor: ACETATE ION, Retinol-binding protein 2 Authors: Ghanbarpour, A, Geiger, J. Deposit date: 2018-07-18 Release date: 2019-10-16 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.965 Å) Cite: Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches. J.Am.Chem.Soc., 141, 2019
3MI7	An Enhanced Repressor of Human Papillomavirus E2 Protein Descriptor: 1,2-ETHANEDIOL, Regulatory protein E2 Authors: Bohm, A, Baleja, J, Bose, K, Meinke, G. Deposit date: 2010-04-09 Release date: 2011-04-06 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Design and characterization of an enhanced repressor of human papillomavirus E2 protein. Faseb J., 25, 2011
4PRX	E. coli GyrB 43-kDa N-terminal fragment in complex with ADP+Pi Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, GyrB, ... Authors: Stanger, F.V, Schirmer, T. Deposit date: 2014-03-06 Release date: 2014-09-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
5CWA	Structure of Anthranilate Synthase Component I (TrpE) from Mycobacterium tuberculosis with inhibitor bound Descriptor: 3-{[(1Z)-1-carboxyprop-1-en-1-yl]oxy}-2-hydroxybenzoic acid, Anthranilate synthase component 1, GLYCEROL, ... Authors: Johnston, J.M, Bashiri, G, Evans, G.L, Lott, J.S, Baker, E.N. Deposit date: 2015-07-28 Release date: 2015-08-12 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and inhibition of subunit I of the anthranilate synthase complex of Mycobacterium tuberculosis and expression of the active complex. Acta Crystallogr.,Sect.D, 71, 2015
6GIR	Arabidopsis thaliana cytosolic seryl-tRNA synthetase Descriptor: Serine--tRNA ligase, cytoplasmic Authors: Kekez, I, Kekez, M, Rokov-Plavec, J, Matkovic-Calogovic, D. Deposit date: 2018-05-15 Release date: 2019-01-02 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.343 Å) Cite: Arabidopsis seryl-tRNA synthetase: the first crystal structure and novel protein interactor of plant aminoacyl-tRNA synthetase. FEBS J., 286, 2019
7QZ6	Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by 5-fluoroTrp Descriptor: DAUNOMYCIN, Transcriptional regulator, PadR-like family Authors: Thunnissen, A.M.W.H. Deposit date: 2022-01-30 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.15 Å) Cite: The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach. J.Am.Chem.Soc., 144, 2022
7QZ8	Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by the unnatural amino acid 5,6-difluoroTrp Descriptor: DAUNOMYCIN, Transcriptional regulator, PadR-like family Authors: Thunnissen, A.M.W.H. Deposit date: 2022-01-30 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach. J.Am.Chem.Soc., 144, 2022
7QZ7	Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by 5,6,7-trifluoroTrp Descriptor: DAUNOMYCIN, Transcriptional regulator, PadR-like family Authors: Thunnissen, A.M.W.H. Deposit date: 2022-01-30 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach. J.Am.Chem.Soc., 144, 2022
6G79	Coupling specificity of heterotrimeric Go to the serotonin 5-HT1B receptor Descriptor: 2-[5-[2-[4-(4-cyanophenyl)piperazin-1-yl]-2-oxidanylidene-ethoxy]-1~{H}-indol-3-yl]ethylazanium, 5-hydroxytryptamine receptor 1B, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Garcia-Nafria, J, Nehme, R, Edwards, P, Tate, C.G. Deposit date: 2018-04-05 Release date: 2018-06-20 Last modified: 2019-12-11 Method: ELECTRON MICROSCOPY (3.78 Å) Cite: Cryo-EM structure of the serotonin 5-HT1Breceptor coupled to heterotrimeric Go. Nature, 558, 2018
7QZ9	Transcriptional regulator LmrR with Trp-67 and Trp-96 replaced by the unnatural amino acid 5,6-difluoroTrp Descriptor: Transcriptional regulator, PadR-like family Authors: Thunnissen, A.M.W.H. Deposit date: 2022-01-30 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.31 Å) Cite: The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach. J.Am.Chem.Soc., 144, 2022
7QZ5	Transcriptional regulator LmrR with Trp-67 and Trp-96 replaced by the unnatural amino acid 5-fluoroTrp Descriptor: Transcriptional regulator, PadR-like family Authors: Thunnissen, A.M.W.H. Deposit date: 2022-01-30 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach. J.Am.Chem.Soc., 144, 2022
5V91	Crystal structure of fosfomycin resistance protein from Klebsiella pneumoniae Descriptor: Fosfomycin resistance protein, ZINC ION Authors: Klontz, E, Guenther, S, Silverstein, Z, Sundberg, E. Deposit date: 2017-03-22 Release date: 2017-08-30 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structure and Dynamics of FosA-Mediated Fosfomycin Resistance in Klebsiella pneumoniae and Escherichia coli. Antimicrob. Agents Chemother., 61, 2017
1Y5W	tRNA-guanine Transglycosylase (TGT) in complex with 6-Amino-4-[2-(4-methylphenyl)ethyl]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one Descriptor: 6-AMINO-4-[2-(4-METHYLPHENYL)ETHYL]-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE, GLYCEROL, Queuine tRNA-ribosyltransferase, ... Authors: Stengl, B, Meyer, E.A, Heine, A, Brenk, R, Diederich, F, Klebe, G. Deposit date: 2004-12-03 Release date: 2005-12-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Crystal structures of tRNA-guanine transglycosylase (TGT) in complex with novel and potent inhibitors unravel pronounced induced-fit adaptations and suggest dimer formation upon substrate binding J.Mol.Biol., 370, 2007
4PS4	Crystal structure of the complex between IL-13 and M1295 FAB Descriptor: Interleukin-13, M1295 HEAVY CHAIN, M1295 LIGHT CHAIN Authors: Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. Deposit date: 2014-03-06 Release date: 2014-03-19 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Human Framework Adaptation of a Mouse Anti-Human Il-13 Antibody. J.Mol.Biol., 398, 2010
5UTG	Red abalone lysin F104A Descriptor: Egg-lysin Authors: Wilburn, D.B, Tuttle, L.M. Deposit date: 2017-02-14 Release date: 2018-01-31 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of sperm lysin yields novel insights into molecular dynamics of rapid protein evolution. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5ABV	Complex of D. melanogaster eIF4E with the 4E-binding protein Mextli Descriptor: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, GH11071P Authors: Peter, D, Weichenrieder, O. Deposit date: 2015-08-09 Release date: 2015-09-02 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Mextli Proteins Use Both Canonical Bipartite and Novel Tripartite Binding Modes to Form Eif4E Complexes that Display Differential Sensitivity to 4E-BP Regulation Genes Dev., 29, 2015
4PN6	Structure of the Cytomegalovirus-Encoded m04 Glycoprotein Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, M04, ... Authors: Berry, R, Rossjohn, J. Deposit date: 2014-05-23 Release date: 2014-07-23 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3 Å) Cite: The Structure of the Cytomegalovirus-Encoded m04 Glycoprotein, a Prototypical Member of the m02 Family of Immunoevasins. J.Biol.Chem., 289, 2014
4POY	Engineered Dual Specific VHH antibody Descriptor: VHH-metal Authors: Fanning, S.W, Walter, R, Horn, J.R. Deposit date: 2014-02-26 Release date: 2014-09-24 Last modified: 2014-10-22 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel., 27, 2014
6FV5	QTRT2, the non-catalytic subunit of murine tRNA-Guanine Transglycosylase Descriptor: DI(HYDROXYETHYL)ETHER, MALONATE ION, Queuine tRNA-ribosyltransferase accessory subunit 2, ... Authors: Behrens, C, Heine, A, Reuter, K. Deposit date: 2018-03-01 Release date: 2018-06-13 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.179 Å) Cite: Homodimer Architecture of QTRT2, the Noncatalytic Subunit of the Eukaryotic tRNA-Guanine Transglycosylase. Biochemistry, 57, 2018
4PRV	E. coli GyrB 43-kDa N-terminal fragment in complex with ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, GyrB, MAGNESIUM ION Authors: Stanger, F.V, Schirmer, T. Deposit date: 2014-03-06 Release date: 2014-09-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
4PPT	Engineered Dual Specific VHH Antibody in Complex with a Nickel (II) Ion Descriptor: Engineered single domain VHH antibody, NICKEL (II) ION, SULFATE ION Authors: Fanning, S.W, Walter, R, Horn, J.R. Deposit date: 2014-02-27 Release date: 2014-09-03 Last modified: 2014-10-22 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel., 27, 2014
6FZO	SMURFP-Y56F mutant Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ... Authors: Janowski, R, Fuenzalida-Wernera, J.P, Mishra, K, Vetschera, P, Weidenfeld, I, Richter, K, Niessing, D, Ntziachristos, V, Stiel, A.C. Deposit date: 2018-03-15 Release date: 2018-10-17 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of a biliverdin-bound phycobiliprotein: Interdependence of oligomerization and chromophorylation. J. Struct. Biol., 204, 2018
3B3Q	Crystal structure of a synaptic adhesion complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Chen, X, Liu, H, Shim, A, Focia, P, He, X. Deposit date: 2007-10-22 Release date: 2008-01-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural basis for synaptic adhesion mediated by neuroligin-neurexin interactions. Nat.Struct.Mol.Biol., 15, 2008
3B5G	Crystal Structure of the Unstable and Highly Fibrillogenic PRO7SER Mutant of the Recombinant Variable Domain 6AJL2 Descriptor: ACETATE ION, AMYLOID LAMBDA 6 LIGHT CHAIN VARIABLE REGION PIP, GLYCEROL, ... Authors: Hernandez-Santoyo, A, Rodriguez-Romero, A. Deposit date: 2007-10-25 Release date: 2008-11-04 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A single mutation at the sheet switch region results in conformational changes favoring lambda6 light-chain fibrillogenesis. J.Mol.Biol., 396, 2010

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