PDB: 223532 resultsInfo pagesStatus searchChemie searchBIRD

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6FL5	Structure of human SHMT1-H135N-R137A-E168N mutant at 3.6 Ang. resolution Descriptor: CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, ... Authors: Giardina, G, Cutruzzola, F, Lucchi, R. Deposit date: 2018-01-25 Release date: 2018-10-10 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.6 Å) Cite: The catalytic activity of serine hydroxymethyltransferase is essential for de novo nuclear dTMP synthesis in lung cancer cells. FEBS J., 285, 2018
6FJW	Streptococcus thermophilus Cas6 Descriptor: CALCIUM ION, Cas6 protein Authors: Tamulaitiene, G, Mogila, I, Siksnys, V, Tamulaitis, G. Deposit date: 2018-01-23 Release date: 2019-02-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Streptococcus thermophilus Cas6 To be published
6FN9	Mono- and bivalent 14-3-3 inhibitors for characterizing supramolecular lysine-PEG interactions in proteins Descriptor: 14-3-3 protein zeta/delta, BENZOIC ACID, GLYCEROL, ... Authors: Bier, D, Ottmann, C. Deposit date: 2018-02-02 Release date: 2018-07-04 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.27 Å) Cite: Mono- and Bivalent 14-3-3 Inhibitors for Characterizing Supramolecular "Lysine Wrapping" of Oligoethylene Glycol (OEG) Moieties in Proteins. Chemistry, 24, 2018
6G73	The dynamic nature of the VDAC1 channels in bilayers: human VDAC1 at 3.3 Angstrom resolution Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Voltage-dependent anion-selective channel protein 1 Authors: Razeto, A, Gribbon, P, Loew, C. Deposit date: 2018-04-04 Release date: 2019-04-24 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.27 Å) Cite: The dynamic nature of the VDAC1 channels in bilayers as revealed by two crystal structures of the human isoform in bicelles at 2.7 and 3.3 Angstrom resolution: implications for VDAC1 voltage-dependent mechanism and for its oligomerization To Be Published
6G7O	Crystal structure of human alkaline ceramidase 3 (ACER3) at 2.7 Angstrom resolution Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Alkaline ceramidase 3,Soluble cytochrome b562, CALCIUM ION, ... Authors: Leyrat, C, Vasiliauskaite-Brooks, I, Healey, R.D, Sounier, R, Grison, C, Hoh, F, Basu, S, Granier, S. Deposit date: 2018-04-06 Release date: 2019-01-02 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure of a human intramembrane ceramidase explains enzymatic dysfunction found in leukodystrophy. Nat Commun, 9, 2018
6G8C	Crystal Structure of the Amyloid-like IYQYGG segment from the R1 repeat of the E. coli Biofilm-associated CsgA Curli protein Descriptor: Major curlin subunit Authors: Landau, M, Perov, S. Deposit date: 2018-04-08 Release date: 2019-04-24 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural Insights into Curli CsgA Cross-beta Fibril Architecture Inspire Repurposing of Anti-amyloid Compounds as Anti-biofilm Agents. Plos Pathog., 15, 2019
6FNB	Mono- and bivalent 14-3-3 inhibitors for characterizing supramolecular lysine-PEG interactions in proteins Descriptor: 14-3-3 protein zeta/delta, BENZOIC ACID, CALCIUM ION, ... Authors: Bier, D, Ottmann, C. Deposit date: 2018-02-02 Release date: 2018-07-04 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Mono- and Bivalent 14-3-3 Inhibitors for Characterizing Supramolecular "Lysine Wrapping" of Oligoethylene Glycol (OEG) Moieties in Proteins. Chemistry, 24, 2018
6FPY	Inter-alpha-inhibitor heavy chain 1, wild type Descriptor: GLYCEROL, Inter-alpha-trypsin inhibitor heavy chain H1, MAGNESIUM ION Authors: Briggs, D.C, Day, A.J. Deposit date: 2018-02-12 Release date: 2019-02-27 Last modified: 2020-03-18 Method: X-RAY DIFFRACTION (2.339 Å) Cite: Inter-alpha-inhibitor heavy chain-1 has an integrin-like 3D structure mediating immune regulatory activities and matrix stabilization during ovulation J.Biol.Chem., 2020
6FWK	The crystal structure of Pol2CORE-M644G in complex with DNA and an incoming nucleotide Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(P*TP*AP*AP*CP*CP*GP*CP*GP*TP*TP*(DOC))-3'), ... Authors: Parkash, V, Johansson, E. Deposit date: 2018-03-06 Release date: 2019-01-30 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.503 Å) Cite: Structural consequence of the most frequently recurring cancer-associated substitution in DNA polymerase epsilon. Nat Commun, 10, 2019
6FXA	Dimerization domain of TP901-1 CI repressor Descriptor: CI, SULFATE ION Authors: Varming, A.K, Rasmussen, K.K, Lo Leggio, L. Deposit date: 2018-03-08 Release date: 2018-05-30 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural basis of the bacteriophage TP901-1 CI repressor dimerization and interaction with DNA. FEBS Lett., 592, 2018
3JXC	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+ Descriptor: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2, THALLIUM (I) ION Authors: Watkins, D, Koudelka, G.B, Williams, L.D. Deposit date: 2009-09-18 Release date: 2010-01-19 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol., 396, 2010
3K1Y	X-ray structure of oxidoreductase from corynebacterium diphtheriae. orthorombic crystal form, northeast structural genomics consortium target cdr100d Descriptor: SULFATE ION, oxidoreductase Authors: Kuzin, A, Lew, S, Sahdev, S, Xiao, R, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) Deposit date: 2009-09-29 Release date: 2009-10-20 Last modified: 2019-07-17 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Northeast Structural Genomics Consortium Target CdR100D To be Published
3K3W	Thermostable Penicillin G acylase from Alcaligenes faecalis in orthorhombic form Descriptor: CALCIUM ION, Penicillin G acylase Authors: Varshney, N.K, Kumar, R.S, Ignatova, Z, Dodson, E, Suresh, C.G. Deposit date: 2009-10-05 Release date: 2009-11-10 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.31 Å) Cite: Crystallization and X-ray structure analysis of a thermostable penicillin G acylase from Alcaligenes faecalis. Acta Crystallogr.,Sect.F, 68, 2012
3JAR	Cryo-EM structure of GDP-microtubule co-polymerized with EB3 Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Zhang, R, Nogales, E. Deposit date: 2015-06-19 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Mechanistic Origin of Microtubule Dynamic Instability and Its Modulation by EB Proteins. Cell(Cambridge,Mass.), 162, 2015
3K03	Crystal Structure of CNG mimicking NaK mutant, NaK-DTPP, K+ complex Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein NaK Authors: Jiang, Y, Derebe, M.G. Deposit date: 2009-09-24 Release date: 2011-01-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.62 Å) Cite: Tuning the ion selectivity of tetrameric cation channels by changing the number of ion binding sites. Proc.Natl.Acad.Sci.USA, 108, 2011
3K3P	Crystal Structure of the Apo Form of D-Alanine:D-Alanine Ligase (DDl) from Streptococcus mutans Descriptor: D-alanine--D-alanine ligase Authors: Lu, Y. Deposit date: 2009-10-03 Release date: 2010-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.23 Å) Cite: Crystal structure of the Apo form of D-Alanine:D-Alanine ligase (DDl) from Streptococcus mutans. Protein Pept.Lett., 17, 2010
3JPY	Crystal structure of the zinc-bound amino terminal domain of the NMDA receptor subunit NR2B Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutamate [NMDA] receptor subunit epsilon-2, ... Authors: Karakas, E, Simorowski, N, Furukawa, H. Deposit date: 2009-09-04 Release date: 2009-12-08 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.209 Å) Cite: Structure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit. Embo J., 28, 2009
3K6I	Crystal structure of chicken T-cadherin EC1 Descriptor: T-cadherin, ZINC ION Authors: Shapiro, L, Ciatto, C. Deposit date: 2009-10-08 Release date: 2010-03-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.13 Å) Cite: T-cadherin structures reveal a novel adhesive binding mechanism Nat.Struct.Mol.Biol., 17, 2010
3JRN	Crystal structure of TIR domain from Arabidopsis Thaliana Descriptor: ARSENIC, AT1G72930 protein Authors: Chan, S.L, Mukasa, T, Santelli, E, Low, L.Y, Pascual, J. Deposit date: 2009-09-08 Release date: 2009-10-20 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: The crystal structure of a TIR domain from Arabidopsis thaliana reveals a conserved helical region unique to plants. Protein Sci., 19, 2009
3JTC	Importance of Mg2+ in the Ca2+-Dependent Folding of the gamma-Carboxyglutamic Acid Domains of Vitamin K-Dependent clotting and anticlotting Proteins Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Endothelial protein C receptor, ... Authors: Bajaj, S.P, Vadivel, K, Agah, S, Cascio, D, Krishnaswamy, S, Esmon, C, Padmanabhan, K. Deposit date: 2009-09-11 Release date: 2011-04-06 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural and Functional Studies of gamma-Carboxyglutamic Acid Domains of Factor VIIa and Activated Protein C: Role of Magnesium at Physiological Calcium. J.Mol.Biol., 425, 2013
3JXB	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C Descriptor: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*A)-3', 5'-D(*TP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2 Authors: Watkins, D, Koudelka, G.B, Williams, L.D. Deposit date: 2009-09-18 Release date: 2010-01-19 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.67 Å) Cite: Sequence Recognition of DNA by Protein-Induced Conformational Transitions J.Mol.Biol., 396, 2010
3K3R	Unrefined crystal structure of a LexA-DNA complex Descriptor: DNA (28-MER), LexA repressor Authors: Zhang, A.P.P, Pigli, Y.Z, Rice, P.A. Deposit date: 2009-10-04 Release date: 2010-08-18 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structure of the LexA-DNA complex and implications for SOS box measurement. Nature, 466, 2010
3K5R	Crystal Structure of mouse T-cadherin EC1 EC2 Descriptor: Cadherin 13 Authors: Shapiro, L, Ciatto, C. Deposit date: 2009-10-07 Release date: 2010-03-02 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: T-cadherin structures reveal a novel adhesive binding mechanism Nat.Struct.Mol.Biol., 17, 2010
3K6D	Crystal structure of Xenopus laevis T-cadherin EC1 Descriptor: T-cadherin, ZINC ION Authors: Shapiro, L, Ciatto, C. Deposit date: 2009-10-08 Release date: 2010-03-02 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: T-cadherin structures reveal a novel adhesive binding mechanism Nat.Struct.Mol.Biol., 17, 2010
3K87	Crystal structure of NADH:FAD oxidoreductase (TftC) - FAD complex Descriptor: Chlorophenol-4-monooxygenase component 1, FLAVIN-ADENINE DINUCLEOTIDE Authors: Kang, C.H, Webb, B.N. Deposit date: 2009-10-13 Release date: 2009-11-10 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Characterization of chlorophenol 4-monooxygenase (TftD) and NADH:FAD oxidoreductase (TftC) of Burkholderia cepacia AC1100. J.Biol.Chem., 285, 2010

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