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9BJK
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BU of 9bjk by Molmil
Inactive mu opioid receptor bound to Nb6, naloxone and NAM
Descriptor: Mu-type opioid receptor, Naloxone, Nalpha-[({(1M)-1-[5-(benzyloxy)pyridin-3-yl]naphthalen-2-yl}sulfanyl)acetyl]-3-methoxy-N,4-dimethyl-L-phenylalaninamide, ...
Authors:O'Brien, E.S, Wang, H, Kaavya Krishna, K, Zhang, C, Kobilka, B.K.
Deposit date:2024-04-25
Release date:2024-07-17
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:A mu-opioid receptor modulator that works cooperatively with naloxone.
Nature, 631, 2024
8XMO
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BU of 8xmo by Molmil
Voltage-gated sodium channel Nav1.7 variant M4
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WX3
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BU of 8wx3 by Molmil
Cryo-EM structure of human SLC15A4 (outward-facing open)
Descriptor: Solute carrier family 15 member 4
Authors:Sakaniwa, K, Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2023-10-27
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Cryo-EM structure of human SLC15A4 (outward-facing open)
To Be Published
8XPU
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BU of 8xpu by Molmil
Overall structure of the LAT1-4F2hc bound with JPH203
Descriptor: (2~{S})-2-azanyl-3-[4-[(5-azanyl-2-phenyl-1,3-benzoxazol-7-yl)methoxy]-3,5-bis(chloranyl)phenyl]propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform 5 of Amino acid transporter heavy chain SLC3A2, ...
Authors:Hu, Z, Yan, R.
Deposit date:2024-01-04
Release date:2024-07-17
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for the inhibition mechanism of LAT1-4F2hc complex by JPH203.
Cell Discov, 10, 2024
8WOM
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BU of 8wom by Molmil
Structure of the wild-type Arabidopsis ABCB19 in the brassinolide-bound state
Descriptor: ABC transporter B family member 19, Brassinolide
Authors:Ying, W, Wei, H, Liu, X, Sun, L.
Deposit date:2023-10-07
Release date:2024-03-13
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and function of the Arabidopsis ABC transporter ABCB19 in brassinosteroid export.
Science, 383, 2024
8XOB
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BU of 8xob by Molmil
VMAT2 protonated state
Descriptor: Synaptic vesicular amine transporter,transporter B
Authors:Jiang, D.H, Wu, D.
Deposit date:2023-12-31
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:VMAT2 protonated state
To Be Published
8WJG
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BU of 8wjg by Molmil
Cryo-EM structure of URAT1(R477S)
Descriptor: Solute carrier family 22 member 12
Authors:Qian, H.W, He, J.J.
Deposit date:2023-09-25
Release date:2024-08-28
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for the transport and substrate selection of human urate transporter 1.
Cell Rep, 43, 2024
8WLJ
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BU of 8wlj by Molmil
Cryo-EM structure of human apo VMAT2 with nanobody in an outward-facing conformation
Descriptor: Synaptic vesicular amine transporter, nanobody
Authors:Qu, Q, Wang, Y, Zhou, Z.
Deposit date:2023-09-30
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of human apo VMAT2 in an outward-facing conformation
To Be Published
9IYE
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BU of 9iye by Molmil
Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.39 A resolution.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHONOACETIC ACID, ...
Authors:Ahmad, N, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2024-07-30
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.39 A resolution.
To Be Published
9IT1
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BU of 9it1 by Molmil
Crystal structure of Pin1 using laue diffraction
Descriptor: 3,6,9,12,15-PENTAOXAHEPTADECANE, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Sun, B, Qi, Q, Xiao, Q.J, Wang, Z.J.
Deposit date:2024-07-19
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Prolyl Isomerase NIMA-interacting 1 (Pin1) using laue diffraction
To Be Published
9AYC
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BU of 9ayc by Molmil
Tetra-phosphorylated, E1435Q Ycf1 mutant in inward-facing wide conformation
Descriptor: Metal resistance protein YCF1
Authors:Carvalho, R.S.A, Rasel, M.S.I, Khandelwal, N.K, Tomasiak, T.M.
Deposit date:2024-03-07
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Cryo-EM structure of the tetra-phosphorylated R-domain in Ycf1 reveals key interactions for transport regulation
To Be Published
8YZK
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BU of 8yzk by Molmil
Orphan receptor GPRC5D in complex with scFv150-18
Descriptor: Soluble cytochrome b562,G-protein coupled receptor family C group 5 member D, scFv
Authors:Yan, P, Lin, X, Xu, F.
Deposit date:2024-04-07
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The binding mechanism of an anti-multiple myeloma antibody to the human GPRC5D homodimer.
Nat Commun, 15, 2024
8ZC6
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BU of 8zc6 by Molmil
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of D1F6 Fab, Light chain of D1F6 Fab, ...
Authors:Liu, B, Gao, X, Li, Z, Chen, Q, He, J, Xiong, X.
Deposit date:2024-04-28
Release date:2024-05-29
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (6.85 Å)
Cite:An unconventional VH1-2 antibody tolerates escape mutations and shows an antigenic hotspot on SARS-CoV-2 spike.
Cell Rep, 43, 2024
9C4G
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BU of 9c4g by Molmil
Cutibacterium acnes 50S ribosomal subunit with Clindamycin bound
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Lomakin, I.B, Devarkar, S.C, Bunick, C.G.
Deposit date:2024-06-04
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Mechanistic basis for the translation inhibition of Cutibacterium acnes by Clindamycin.
J Invest Dermatol., 2024
8WJ0
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BU of 8wj0 by Molmil
cryo-EM structure of human haemoglobin in carbonmonoxy form
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
8X20
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BU of 8x20 by Molmil
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:E-CFCP-TP ternary complex
Descriptor: DNA/RNA (38-MER), E-CFCP-triphosphate, GLYCEROL, ...
Authors:Yasutake, Y, Hattori, S.I, Mitsuya, H.
Deposit date:2023-11-09
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Deviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations.
Sci Rep, 14, 2024
8X56
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BU of 8x56 by Molmil
BA.2.86 Spike Trimer with T356K mutation (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yue, C, Liu, P.
Deposit date:2023-11-16
Release date:2024-06-26
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity.
Natl Sci Rev, 11, 2024
8WRM
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BU of 8wrm by Molmil
XBB.1.5 spike protein in complex with ACE2
Descriptor: Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-15
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.34 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
9AAT
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BU of 9aat by Molmil
X-RAY STRUCTURE REFINEMENT AND COMPARISON OF THREE FORMS OF MITOCHONDRIAL ASPARTATE AMINOTRANSFERASE
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
Authors:Mcphalen, C.A, Vincent, M.G, Jansonius, J.N.
Deposit date:1991-12-02
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structure refinement and comparison of three forms of mitochondrial aspartate aminotransferase.
J.Mol.Biol., 225, 1992
8WLL
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BU of 8wll by Molmil
Cryo-EM structure of human VMAT2 Y422C, in the presence of reserpine, determined in an inward-facing conformation
Descriptor: Synaptic vesicular amine transporter, reserpine
Authors:Qu, Q, Wang, Y, Zhou, Z.
Deposit date:2023-09-30
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Cryo-EM structure of human VMAT2 Y422C, in the presence of reserpine, determined in an inward-facing conformation
To Be Published
8WRO
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BU of 8wro by Molmil
XBB.1.5.10 spike protein in complex with ACE2
Descriptor: Processed angiotensin-converting enzyme 2, Spike glycoprotein,Spike glycoprotein,Spike glycoprotein,Fusion protein
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-15
Release date:2023-12-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8YBB
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BU of 8ybb by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis with side opening
Descriptor: Sigma non-opioid intracellular receptor 1
Authors:Xiao, Y, Fu, C, Sun, Z, Zhou, X.
Deposit date:2024-02-12
Release date:2024-07-17
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
9C7U
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BU of 9c7u by Molmil
Structure of the human truncated BOS complex in GDN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BOS complex subunit NOMO2, Nicalin, ...
Authors:Nguyen, V.N, Tomaleri, G.P, Voorhees, R.M.
Deposit date:2024-06-11
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Role of a holo-insertase complex in the biogenesis of biophysically diverse ER membrane proteins.
Mol.Cell, 2024
8WTD
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BU of 8wtd by Molmil
XBB.1.5.10 RBD in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S2'
Authors:Feng, L.L, Feng, L.L.
Deposit date:2023-10-18
Release date:2023-12-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
9CA2
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BU of 9ca2 by Molmil
ENGINEERING THE HYDROPHOBIC POCKET OF CARBONIC ANHYDRASE II
Descriptor: CARBONIC ANHYDRASE II, MERCURY (II) ION, ZINC ION
Authors:Alexander, R.S, Christianson, D.W.
Deposit date:1991-07-09
Release date:1992-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Engineering the hydrophobic pocket of carbonic anhydrase II.
Biochemistry, 30, 1991

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