PDB: 36667 resultsInfo pagesStatus searchChemie searchBIRD

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7O12	ABC transporter NosDFY, AMPPNP-bound in GDN Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ABC transporter ATP-binding protein NosF, ... Authors: Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. Deposit date: 2021-03-28 Release date: 2022-04-13 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7O10	ABC transporter NosDFY, nucleotide-free in GDN, R-domain 2 Descriptor: MAGNESIUM ION, Probable ABC transporter ATP-binding protein NosF, Probable ABC transporter binding protein NosD, ... Authors: Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. Deposit date: 2021-03-28 Release date: 2022-04-13 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7O17	ABC transporter NosDFY E154Q, ATP-bound in lipid nanodisc Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable ABC transporter ATP-binding protein NosF, ... Authors: Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. Deposit date: 2021-03-28 Release date: 2022-04-13 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7O11	ABC transporter NosDFY, nucleotide-free in GDN, R-domain 1 Descriptor: MAGNESIUM ION, Probable ABC transporter ATP-binding protein NosF, Probable ABC transporter binding protein NosD, ... Authors: Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. Deposit date: 2021-03-28 Release date: 2022-04-13 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7O0Z	ABC transporter NosFY, nucleotide-free in GDN Descriptor: Probable ABC transporter ATP-binding protein NosF, Probable ABC transporter permease protein NosY Authors: Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. Deposit date: 2021-03-28 Release date: 2022-11-02 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7O13	ABC transporter NosDFY, nucleotide-free in lipid nanodisc Descriptor: MAGNESIUM ION, Probable ABC transporter ATP-binding protein NosF, Probable ABC transporter binding protein NosD, ... Authors: Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. Deposit date: 2021-03-28 Release date: 2022-11-02 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7M6T	Crystal structure of SOCS2/ElonginB/ElonginC bound to a non-canonical peptide that enhances phospho-peptide binding Descriptor: Elongin-B, Elongin-C, Non-canonical peptide F3, ... Authors: Kershaw, N.J, Li, K, Linossi, E.M, Nicholson, S.E. Deposit date: 2021-03-26 Release date: 2021-10-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.194 Å) Cite: Discovery of an exosite on the SOCS2-SH2 domain that enhances SH2 binding to phosphorylated ligands. Nat Commun, 12, 2021
7M74	ATP-bound AMP-activated protein kinase Descriptor: 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-2, 5'-AMP-activated protein kinase subunit gamma-1, ... Authors: Yan, Y, Mukherjee, S, Harikumar, K.G, Strutzenberg, T, Zhou, X.E, Powell, S.K, Xu, T, Sheldon, R, Lamp, J, Brunzelle, J.S, Radziwon, K, Ellis, A, Novick, S.J, Vega, I.E, Jones, R, Miller, L.J, Xu, H.E, Griffin, P.R, Kossiakoff, A.A, Melcher, K. Deposit date: 2021-03-26 Release date: 2021-12-15 Last modified: 2021-12-22 Method: ELECTRON MICROSCOPY (3.93 Å) Cite: Structure of an AMPK complex in an inactive, ATP-bound state. Science, 373, 2021
7O0K	Crystal structure of recombinant chichen liver Bile Acid Binding Protein (cL-BABP) in complex with cholic acid Descriptor: CHOLIC ACID, Fatty acid-binding protein, liver Authors: Tassone, G, Pozzi, C. Deposit date: 2021-03-26 Release date: 2021-05-12 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Validation of Recombinant Chicken Liver Bile Acid Binding Protein as a Tool for Cholic Acid Hosting. Biomolecules, 11, 2021
7O0J	High resolution structure of recombinant chichen liver Bile Acid Binding Protein (cL-BABP) Descriptor: Fatty acid-binding protein, liver Authors: Tassone, G, Pozzi, C. Deposit date: 2021-03-26 Release date: 2021-05-12 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Validation of Recombinant Chicken Liver Bile Acid Binding Protein as a Tool for Cholic Acid Hosting. Biomolecules, 11, 2021
7O0H	Structure of the foamy viral protease-reverse transcriptase dRH in complex with ds DNA. Descriptor: DNA (5'-D(*AP*AP*CP*AP*GP*AP*GP*TP*GP*CP*GP*AP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*CP*TP*G)-3'), Pr125Pol Authors: Nowak, E, Nowacka, M, Nowotny, M. Deposit date: 2021-03-26 Release date: 2021-06-30 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (3.09 Å) Cite: Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase. J.Virol., 95, 2021
7O0G	Structure of the foamy viral protease-reverse transcriptase in complex with RNA/DNA hybrid. Descriptor: DNA (5'-D(*CP*CP*TP*CP*TP*CP*CP*TP*GP*GP*AP*CP*AP*AP*G)-3'), Pr125Pol, RNA (5'-R(*UP*UP*CP*UP*UP*GP*UP*CP*CP*AP*GP*GP*AP*GP*AP*GP*G)-3') Authors: Nowak, E, Nowacka, M, Nowotny, M. Deposit date: 2021-03-26 Release date: 2021-06-30 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase. J.Virol., 95, 2021
7M69	E1435Q Ycf1 mutant in inward-facing wide conformation Descriptor: Metal resistance protein YCF1 Authors: Khandelwal, N.K, Millan, C.R, Thaker, T.M, Tomasiak, T.M. Deposit date: 2021-03-25 Release date: 2022-04-06 Last modified: 2022-10-19 Method: ELECTRON MICROSCOPY (3.42 Å) Cite: The structural basis for regulation of the glutathione transporter Ycf1 by regulatory domain phosphorylation. Nat Commun, 13, 2022
7M68	E1435Q Ycf1 mutant in inward-facing narrow conformation Descriptor: Metal resistance protein YCF1 Authors: Khandelwal, N.K, Millan, C.R, Thaker, T.M, Tomasiak, T.M. Deposit date: 2021-03-25 Release date: 2022-04-06 Last modified: 2022-10-19 Method: ELECTRON MICROSCOPY (4.04 Å) Cite: The structural basis for regulation of the glutathione transporter Ycf1 by regulatory domain phosphorylation. Nat Commun, 13, 2022
7M6C	Crystal structure of PLA2 from snake venom of peruvian Bothrops atrox Descriptor: Basic phospholipase A2, LAURIC ACID Authors: Leonardo, D.A, Chojnowski, G, Simpkin, A, Seifert-Davila, W, Vivas-Ruiz, D.E, Keegan, R, Rigden, D. Deposit date: 2021-03-25 Release date: 2022-01-12 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.95 Å) Cite: findMySequence: a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM Iucrj, 9, 2022
5S9K	XChem group deposition -- Crystal Structure of human ACVR1 in complex with FM010955a Descriptor: (3S)-3-aminopyrrolidin-2-one, 1,2-ETHANEDIOL, 4-methyl-3-[4-(1-methylpiperidin-4-yl)phenyl]-5-(3,4,5-trimethoxyphenyl)pyridine, ... Authors: Williams, E.P, Adamson, R.J, Smil, D, Krojer, T, Burgess-Brown, N, von Delft, F, Bountra, C, Bullock, A.N. Deposit date: 2021-03-25 Release date: 2021-06-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.35 Å) Cite: XChem group deposition To Be Published
7EGO	X-ray structure of the human heart fatty acid-binding protein complexed with the fluorescent probe HA527 Descriptor: 3-[methyl-(4-nitro-2,1,3-benzoxadiazol-7-yl)amino]propanoic acid, Fatty acid-binding protein, heart, ... Authors: Takabayashi, M, Yokota, J, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Sugiyama, S. Deposit date: 2021-03-24 Release date: 2022-03-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.21 Å) Cite: X-ray structure of the human heart fatty acid-binding protein complexed with the fluorescent probe HA527 To Be Published
7EGC	p53-bound TFIID-based holo PIC on HDM2 promoter Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... Authors: Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-12 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7EGB	TFIID-based holo PIC on SCP promoter Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... Authors: Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-05 Last modified: 2023-07-26 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7NZM	Cryo-EM structure of pre-dephosphorylation complex of phosphorylated eIF2alpha with trapped holophosphatase (PP1A_D64A/PPP1R15A/G-actin/DNase I) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Yan, Y, Hardwick, S, Ron, D. Deposit date: 2021-03-24 Release date: 2021-09-29 Last modified: 2021-10-20 Method: ELECTRON MICROSCOPY (3.96 Å) Cite: Higher-order phosphatase-substrate contacts terminate the integrated stress response. Nat.Struct.Mol.Biol., 28, 2021
7EGP	The structure of SWI/SNF-nucleosome complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ... Authors: Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P. Deposit date: 2021-03-24 Release date: 2022-01-12 Method: ELECTRON MICROSCOPY (6.9 Å) Cite: Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity. Cell Discov, 7, 2021
7NZY	Crystal structure of human Casein Kinase I delta in complex with CGS-15943 Descriptor: 9-chloranyl-2-(furan-2-yl)-[1,2,4]triazolo[1,5-c]quinazolin-5-amine, Casein kinase I isoform delta, MALONATE ION, ... Authors: Pichlo, C, Baumann, U. Deposit date: 2021-03-24 Release date: 2022-10-05 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Phenotypic Discovery of Triazolo[1,5- c ]quinazolines as a First-In-Class Bone Morphogenetic Protein Amplifier Chemotype. J.Med.Chem., 65, 2022
7EGN	Crystal structure of the P450 BM3 heme domain mutant F87A in complex with N-imidazolyl-hexanoyl-L-phenylalanine and hydroxylamine Descriptor: (2S)-2-(6-imidazol-1-ylhexanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, GLYCEROL, ... Authors: Jiang, Y, Dong, S, Feng, Y, Cong, Z. Deposit date: 2021-03-24 Release date: 2021-08-18 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: H-Bonding Networks Dictate the Molecular Mechanism of H2O2 Activation by P450 Acs Catalysis, 11, 2021
7M5D	Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Zhang, J. Deposit date: 2021-03-23 Release date: 2022-10-19 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I) To Be Published
7NYU	Respiratory complex I from Escherichia coli - conformation 2 Descriptor: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... Authors: Kolata, P, Efremov, R.G. Deposit date: 2021-03-23 Release date: 2021-08-25 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation. Elife, 10, 2021

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