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1XSU
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Solution structure of E.coli RNase P RNA P4 stem, U69C/C70U mutation, complexed with cobalt (III) hexammine.
Descriptor: COBALT HEXAMMINE(III), RNA (27-MER)
Authors:Schmitz, M.
Deposit date:2004-10-20
Release date:2004-12-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Change of RNase P RNA function by single base mutation correlates with perturbation of metal ion binding in P4 as determined by NMR spectroscopy
Nucleic Acids Res., 32, 2004
1XST
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Solution structure of E.coli RNase P RNA P4 stem, U69A mutation, complexed with cobalt (III) hexammine.
Descriptor: COBALT HEXAMMINE(III), RNA (27-MER)
Authors:Schmitz, M.
Deposit date:2004-10-20
Release date:2004-12-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Change of RNase P RNA function by single base mutation correlates with perturbation of metal ion binding in P4 as determined by NMR spectroscopy
Nucleic Acids Res., 32, 2004
1NGM
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Crystal structure of a yeast Brf1-TBP-DNA ternary complex
Descriptor: 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3', 5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', Transcription factor IIIB BRF1 subunit, ...
Authors:Juo, Z.S, Kassavetis, G.A, Wang, J, Geiduschek, E.P, Sigler, P.B.
Deposit date:2002-12-17
Release date:2003-03-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of a transcription factor IIIB core interface ternary complex
Nature, 422, 2003
4PUF
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BU of 4puf by Molmil
Complex between the Salmonella T3SS effector SlrP and its human target thioredoxin-1
Descriptor: E3 ubiquitin-protein ligase SlrP, Thioredoxin
Authors:Zouhir, S, Bernal-Bayard, J, Cordero-Alba, M, Cardenal-Munoz, E, Guimaraes, B, Lazar, N, Ramos-Morales, F, Nessler, S.
Deposit date:2014-03-13
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.296 Å)
Cite:The structure of the Slrp-Trx1 complex sheds light on the autoinhibition mechanism of the type III secretion system effectors of the NEL family.
Biochem.J., 464, 2014
5UI6
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BU of 5ui6 by Molmil
Solution NMR Structure of Lasso Peptide Acinetodin
Descriptor: Acinetodin
Authors:Bushin, L.B, Metelev, M, Severinov, K, Seyedsayamdost, M.R.
Deposit date:2017-01-12
Release date:2017-02-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Acinetodin and Klebsidin, RNA Polymerase Targeting Lasso Peptides Produced by Human Isolates of Acinetobacter gyllenbergii and Klebsiella pneumoniae.
ACS Chem. Biol., 12, 2017
5UI7
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Solution NMR Structure of Lasso Peptide Klebsidin
Descriptor: Klebsidin
Authors:Bushin, L.B, Metelev, M, Severinov, K, Seyedsayamdost, M.R.
Deposit date:2017-01-13
Release date:2017-02-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Acinetodin and Klebsidin, RNA Polymerase Targeting Lasso Peptides Produced by Human Isolates of Acinetobacter gyllenbergii and Klebsiella pneumoniae.
ACS Chem. Biol., 12, 2017
5HCN
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GPN-loop GTPase Npa3 in complex with GMPPCP
Descriptor: GLYCEROL, GPN-loop GTPase 1, LAURIC ACID, ...
Authors:Niesser, J, Wagner, F.R, Kostrewa, D, Muehlbacher, W, Cramer, P.
Deposit date:2016-01-04
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of GPN-Loop GTPase Npa3 and Implications for RNA Polymerase II Assembly.
Mol.Cell.Biol., 36, 2015
5HCI
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BU of 5hci by Molmil
GPN-loop GTPase Npa3 in complex with GDP
Descriptor: GLYCEROL, GPN-loop GTPase 1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Niesser, J, Wagner, F.R, Kostrewa, D, Muehlbacher, W, Cramer, P.
Deposit date:2016-01-04
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of GPN-Loop GTPase Npa3 and Implications for RNA Polymerase II Assembly.
Mol.Cell.Biol., 36, 2015
1PLQ
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CRYSTAL STRUCTURE OF THE EUKARYOTIC DNA POLYMERASE PROCESSIVITY FACTOR PCNA
Descriptor: MERCURY (II) ION, PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA)
Authors:Krishna, T.S.R, Kong, X.-P, Gary, S, Burgers, P.M, Kuriyan, J.
Deposit date:1995-01-02
Release date:1995-03-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA.
Cell(Cambridge,Mass.), 79, 1994
1PLR
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CRYSTAL STRUCTURE OF THE EUKARYOTIC DNA POLYMERASE PROCESSIVITY FACTOR PCNA
Descriptor: PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA)
Authors:Krishna, T.S.R, Kong, X.-P, Gary, S, Burgers, P.M, Kuriyan, J.
Deposit date:1995-01-02
Release date:1995-03-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA.
Cell(Cambridge,Mass.), 79, 1994
8TDZ
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BU of 8tdz by Molmil
16mer self-complementary duplex RNA with D:U pair sequence 2
Descriptor: COBALT HEXAMMINE(III), RNA
Authors:Fang, Z, Jia, X, Szostak, J.W.
Deposit date:2023-07-05
Release date:2024-06-12
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Diaminopurine in Nonenzymatic RNA Template Copying.
J.Am.Chem.Soc., 146, 2024
5NOH
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BU of 5noh by Molmil
HRSV M2-1 core domain
Descriptor: Transcription elongation factor M2-1
Authors:Josts, I, Almeida Hernandez, Y, Molina, I.G, de Prat-Gay, G, Tidow, H.
Deposit date:2017-04-12
Release date:2018-01-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and stability of the Human respiratory syncytial virus M2-1RNA-binding core domain reveals a compact and cooperative folding unit.
Acta Crystallogr F Struct Biol Commun, 74, 2018
2VOD
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BU of 2vod by Molmil
Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAUUUU
Descriptor: 5'-R(*AP*UP*AP*UP*UP*UP*UP)-3', LUPUS LA PROTEIN
Authors:Kotik-Kogan, O, Valentine, E.R, Sanfelice, D, Conte, M.R, Curry, S.
Deposit date:2008-02-15
Release date:2008-05-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein.
Structure, 16, 2008
2VOO
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BU of 2voo by Molmil
Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer UUUUUUUU
Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP)-3', LUPUS LA PROTEIN
Authors:Kotik-Kogan, O, Valentine, E.R, Sanfelice, D, Conte, M.R, Curry, S.
Deposit date:2008-02-19
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein.
Structure, 16, 2008
1TF6
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BU of 1tf6 by Molmil
CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
Descriptor: DNA (5'-D(*AP*CP*GP*GP*GP*CP*CP*TP*GP*GP*TP*TP*AP*GP*TP*AP*C P*CP*TP*GP*GP*AP* TP*GP*GP*GP*AP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*AP*GP*GP*T P*AP*CP*TP*AP*AP* CP*CP*AP*GP*GP*CP*CP*CP*G)-3'), PROTEIN (TRANSCRIPTION FACTOR IIIA), ...
Authors:Nolte, R.T, Conlin, R.M, Harrison, S.C, Brown, R.S.
Deposit date:1998-03-02
Release date:1998-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex.
Proc.Natl.Acad.Sci.USA, 95, 1998
2VON
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BU of 2von by Molmil
Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAAUUU
Descriptor: 5'-R(*AP*UP*AP*AP*UP*UP*UP)-3', LUPUS LA PROTEIN
Authors:Kotik-Kogan, O, Valentine, E.R, Sanfelice, D, Conte, M.R, Curry, S.
Deposit date:2008-02-19
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein.
Structure, 16, 2008
2VOP
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BU of 2vop by Molmil
Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUUUU
Descriptor: 5'-R(*AP*UP*UP*UP*UP)-3', LUPUS LA PROTEIN, SULFATE ION
Authors:Kotik-Kogan, O, Valentine, E.R, Sanfelice, D, Conte, M.R, Curry, S.
Deposit date:2008-02-19
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein.
Structure, 16, 2008
6IVU
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BU of 6ivu by Molmil
Solution structure of the Sigma-anti-sigma factor complex RsgI1N-SigI1C from Clostridium thermocellum
Descriptor: Anti-sigma-I factor RsgI1, RNA polymerase sigma factor SigI1
Authors:Wei, Z, Feng, Y.
Deposit date:2018-12-04
Release date:2019-05-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
8GXS
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BU of 8gxs by Molmil
PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X.
Deposit date:2022-09-21
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Structures of +1 nucleosome-bound PIC-Mediator complex.
Science, 378, 2022
8GXQ
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PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X, Xu, Y.
Deposit date:2022-09-21
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (5.04 Å)
Cite:Structures of +1 nucleosome-bound PIC-Mediator complex.
Science, 378, 2022
7OM7
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BU of 7om7 by Molmil
Thosea asigna virus RdRP domain in complex with RNA and nucleotide UMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Ferrero, D.S, Falqui, M, Verdaguer, N.
Deposit date:2021-05-21
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM6
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BU of 7om6 by Molmil
Thosea asigna virus RdRP domain in complex with RNA
Descriptor: DI(HYDROXYETHYL)ETHER, RNA (5'-R(P*AP*AP*AP*UP*UP*U)-3'), RNA-dependent RNA polymerase
Authors:Ferrero, D.S, Falqui, M, Verdaguer, N.
Deposit date:2021-05-21
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
6C27
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BU of 6c27 by Molmil
SAM-III riboswitch ON-state
Descriptor: COBALT HEXAMMINE(III), SAM-III riboswitch
Authors:Grigg, J.C, Price, I.R, Ke, A.
Deposit date:2018-01-07
Release date:2019-01-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Evidence for two-tiered conformation selection in the SAM-III riboswitch
To Be Published
2JXV
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BU of 2jxv by Molmil
Solution structure of a let-7 miRNA:lin-41 mRNA complex from C. elegans
Descriptor: RNA (33-MER)
Authors:Cevec, M, Thibaudeau, C, Plavec, J.
Deposit date:2007-11-30
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of a let-7 miRNA:lin-41 mRNA complex from C. elegans.
Nucleic Acids Res., 36, 2008
2KPV
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BU of 2kpv by Molmil
NMR model of the first let-7 miRNA complementary site (LCS1) in 3'-UTR of lin-41 mRNA from C. elegans
Descriptor: RNA (34-MER)
Authors:Cevec, M, Thibaudeau, C, Plavec, J.
Deposit date:2009-10-20
Release date:2010-08-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of the let-7 miRNA interacting with the site LCS1 of lin-41 mRNA from Caenorhabditis elegans.
Nucleic Acids Res., 38, 2010

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