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5PNI
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BU of 5pni by Molmil
PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement with no ligand modelled (structure 212)
Descriptor: 1,2-ETHANEDIOL, Lysine-specific demethylase 4D, MAGNESIUM ION, ...
Authors:Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Vollmar, M, Ng, J, Szykowska, A, Burgess-Brown, N, Brennan, P.E, Cox, O, Oppermann, U, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
Deposit date:2017-02-07
Release date:2017-03-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density.
Nat Commun, 8, 2017
7OCA
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BU of 7oca by Molmil
Resting state full-length GluA1/A2 heterotertramer in complex with TARP gamma 8 and CNIH2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, D, Watson, J.F, Matthews, P.M, Cais, O, Greger, I.H.
Deposit date:2021-04-26
Release date:2021-06-09
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Gating and modulation of a hetero-octameric AMPA glutamate receptor.
Nature, 594, 2021
4U2Z
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BU of 4u2z by Molmil
X-ray crystal structure of an Sco GlgEI-V279S/1,2,2-trifluromaltose complex
Descriptor: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1, alpha-D-glucopyranose-(1-4)-2-deoxy-2,2-difluoro-alpha-D-arabino-hexopyranosyl fluoride
Authors:Ronning, D.R, Lindenberger, J.J.
Deposit date:2014-07-18
Release date:2015-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Synthesis of 2-deoxy-2,2-difluoro-alpha-maltosyl fluoride and its X-ray structure in complex with Streptomyces coelicolor GlgEI-V279S.
Org.Biomol.Chem., 13, 2015
7OH4
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BU of 7oh4 by Molmil
Cryo-EM structure of Drs2p-Cdc50p in the E1 state with PI4P and Mg2+ bound
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P.
Deposit date:2021-05-09
Release date:2021-06-09
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase
J.Mol.Biol., 2021
7OH7
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BU of 7oh7 by Molmil
Cryo-EM structure of Drs2p-Cdc50p in the E1-AMPPCP state with PI4P bound
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell division control protein 50, ...
Authors:Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P.
Deposit date:2021-05-09
Release date:2021-06-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase
J.Mol.Biol., 2021
3WBE
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BU of 3wbe by Molmil
Rice Os3BGlu6 Beta-Glucosidase E178Q mutant in a covalent complex with Glc from GA4GE.
Descriptor: Beta-glucosidase 6, GLYCEROL, alpha-D-glucopyranose
Authors:Sansenya, S, Hua, Y, Cairns, J.R.K.
Deposit date:2013-05-14
Release date:2013-09-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Enzymatic and structural characterization of hydrolysis of gibberellin A4 glucosyl ester by a rice beta-d-glucosidase
Arch.Biochem.Biophys., 537, 2013
1NHI
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BU of 1nhi by Molmil
Crystal structure of N-terminal 40KD MutL (LN40) complex with ADPnP and one potassium
Descriptor: 1,2-ETHANEDIOL, DNA mismatch repair protein mutL, MAGNESIUM ION, ...
Authors:Hu, X, Machius, M, Yang, W.
Deposit date:2002-12-19
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Monovalent cation dependence and preference of GHKL ATPases and kinases
FEBS Lett., 544, 2003
6UZ3
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BU of 6uz3 by Molmil
Cardiac sodium channel
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jiang, D, Shi, H, Tonggu, L, Lenaeus, M.J, Zheng, N, Catterall, W.A.
Deposit date:2019-11-14
Release date:2020-01-01
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the Cardiac Sodium Channel.
Cell, 180, 2020
4BVO
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BU of 4bvo by Molmil
Legionella pneumophila NTPDase1 crystal form VI (part-open) in complex with polytungstate POM-1
Descriptor: 12-POLYTUNGSTATE, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE I, L(+)-TARTARIC ACID, ...
Authors:Zebisch, M, Schaefer, P, Straeter, N.
Deposit date:2013-06-27
Release date:2014-02-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Legionella Pneumophila Ntpdase1 in Complex with Polyoxometallates.
Acta Crystallogr.,Sect.D, 70, 2014
9DKP
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BU of 9dkp by Molmil
The structure of human vacuolar protein sorting 34 catalytic domain bound to RD-I-53
Descriptor: (8R)-3-(1,3-benzothiazol-2-yl)pyrazolo[1,5-a]pyrimidine, 2-ETHOXYETHANOL, CHLORIDE ION, ...
Authors:Abiodun, W.O, Tsubaki, E, Dass, R, Singleton, J.D, Samarawickrama, P, Doukov, T, Peterson, M.A, Moody, J.D.
Deposit date:2024-09-09
Release date:2025-09-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Facile Bacterial Production of Human Vacuolar Protein Sorting 34 Enables Structural Characterization of Novel Inhibitors
To Be Published
6V54
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BU of 6v54 by Molmil
Crystal Structure of Metallo Beta Lactamase from Hirschia baltica
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Maltseva, N, Kim, Y, Clancy, S, Endres, M, Mulligan, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-03
Release date:2019-12-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Metallo Beta Lactamase from Hirschia baltica.
To Be Published
1T76
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BU of 1t76 by Molmil
Crystal structure of the androgen receptor ligand binding domain in complex with a WxxVW motif
Descriptor: 1,2-ETHANEDIOL, 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, ...
Authors:Hur, E, Pfaff, S.J, Payne, E.S, Gron, H, Buehrer, B.M, Fletterick, R.J.
Deposit date:2004-05-08
Release date:2004-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Recognition and accommodation at the androgen receptor coactivator binding interface.
Plos Biol., 2, 2004
7OH6
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BU of 7oh6 by Molmil
Cryo-EM structure of Drs2p-Cdc50p in the [PS]E2-AlFx state
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Timcenko, M, Dieudonne, T, Montigny, C, Boesen, T, Lyons, J.A, Lenoir, G, Nissen, P.
Deposit date:2021-05-09
Release date:2021-06-09
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of substrate-independent phosphorylation in a P4-ATPase lipid flippase
J.Mol.Biol., 2021
1T8M
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BU of 1t8m by Molmil
CRYSTAL STRUCTURE OF THE P1 HIS BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX
Descriptor: Chymotrypsin A, Pancreatic trypsin inhibitor, SULFATE ION
Authors:Czapinska, H, Helland, R, Otlewski, J, Smalas, A.O.
Deposit date:2004-05-13
Release date:2005-03-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of five bovine chymotrypsin complexes with P1 BPTI variants.
J.Mol.Biol., 344, 2004
5U7D
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BU of 5u7d by Molmil
PDE2 catalytic domain complexed with inhibitors
Descriptor: 2-(3,4-dimethoxybenzyl)-7-[(2R,3R)-2-hydroxy-6-phenylhexan-3-yl]-5-methylimidazo[5,1-f][1,2,4]triazin-4(3H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Pandit, J, Parris, K.
Deposit date:2016-12-12
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Application of Structure-Based Design and Parallel Chemistry to Identify a Potent, Selective, and Brain Penetrant Phosphodiesterase 2A Inhibitor.
J. Med. Chem., 60, 2017
3DPC
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BU of 3dpc by Molmil
Structure of E.coli Alkaline Phosphatase Mutant in Complex with a Phosphorylated Peptide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alkaline phosphatase, PHOSPHATE ION, ...
Authors:Wang, W.H, Jiang, T.
Deposit date:2008-07-07
Release date:2009-06-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of a universal phosphorylated peptide-binding protein for simultaneous assay of kinases
Biosens.Bioelectron., 24, 2009
6LON
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BU of 6lon by Molmil
Crystal structure of HPSG
Descriptor: (2~{S})-2,3-bis(oxidanyl)propane-1-sulfonic acid, GLYCEROL, PFL2/glycerol dehydratase family glycyl radical enzyme, ...
Authors:Liu, J, Zhang, Y, Yuchi, Z.
Deposit date:2020-01-06
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two radical-dependent mechanisms for anaerobic degradation of the globally abundant organosulfur compound dihydroxypropanesulfonate.
Proc.Natl.Acad.Sci.USA, 117, 2020
9MSU
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BU of 9msu by Molmil
Candida albicans Hsp90 nucleotide binding domain in complex with BX2819
Descriptor: 1,2-ETHANEDIOL, Heat shock protein 90 homolog, ethyl (4-{3-[2,4-dihydroxy-5-(1-methylethyl)phenyl]-5-sulfanyl-4H-1,2,4-triazol-4-yl}benzyl)carbamate
Authors:Kowalewski, M.E, Redinbo, M.R.
Deposit date:2025-01-10
Release date:2025-06-04
Last modified:2025-06-18
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Insights into Selectively Targeting Candida albicans Hsp90.
Biochemistry, 64, 2025
5FDL
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BU of 5fdl by Molmil
Crystal Structure of K103N/Y181C Mutant HIV-1 Reverse Transcriptase (RT) in Complex with IDX899
Descriptor: P51 Reverse transcriptase, P66 Reverse transcriptase, methyl (R)-(2-carbamoyl-5-chloro-1H-indol-3-yl)[3-(2-cyanoethyl)-5-methylphenyl]phosphinate
Authors:Dousson, C.B, Alexandre, F.-R, Convard, T, Fisher, M, Lamers, M.B.A.C, Leonard, P.M.
Deposit date:2015-12-16
Release date:2016-02-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Discovery of the Aryl-phospho-indole IDX899, a Highly Potent Anti-HIV Non-nucleoside Reverse Transcriptase Inhibitor.
J.Med.Chem., 59, 2016
3O12
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BU of 3o12 by Molmil
The crystal structure of a functionally unknown protein from Saccharomyces cerevisiae.
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Uncharacterized protein YJL217W
Authors:Zhang, R, Tan, K, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-07-20
Release date:2010-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of a functionally unknown protein from Saccharomyces cerevisiae.
TO BE PUBLISHED
3G8V
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BU of 3g8v by Molmil
The rationally designed catalytically inactive mutant Mth0212(D151N)
Descriptor: Exodeoxyribonuclease, GLYCEROL, TETRAETHYLENE GLYCOL
Authors:Lakomek, K, Dickmanns, A, Ficner, R.
Deposit date:2009-02-12
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
2WLR
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BU of 2wlr by Molmil
Putative thiosulfate sulfurtransferase YnjE
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PUTATIVE THIOSULFATE SULFURTRANSFERASE YNJE
Authors:Declercq, J.P, Smeets, A, Depuydt, M, Collet, J.F.
Deposit date:2009-06-25
Release date:2010-09-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Analysis of Ynje, a Putative Thiosulfate Sulfurtransferase
To be Published
9LSL
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BU of 9lsl by Molmil
The crystal structure of PDE5A with L1
Descriptor: (13~{S},15~{R})-15-(3-chloranyl-4-methoxy-phenyl)-12-ethanoyl-8,12,16-triazatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadeca-1(17),2,4,6,8-pentaene-4-carbonitrile, MAGNESIUM ION, ZINC ION, ...
Authors:Wu, D, Huang, Y.-Y, Luo, H.-B.
Deposit date:2025-02-04
Release date:2025-06-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Plasma metabolites-based drug design: Discovery of novel and highly selective phosphodiesterase 5 inhibitors
Chin.Chem.Lett., 2025
7JSO
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BU of 7jso by Molmil
P. syringae AldA Indole-3-Acetaldehyde Dehydrogenase C302A mutant in complex with NAD+ and IAA
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1H-INDOL-3-YLACETIC ACID, Aldehyde dehydrogenase family protein
Authors:Jez, J.M.
Deposit date:2020-08-15
Release date:2021-06-23
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.848 Å)
Cite:Investigating the reaction and substrate preference of indole-3-acetaldehyde dehydrogenase from the plant pathogen Pseudomonas syringae PtoDC3000.
Biosci.Rep., 40, 2020
3G9I
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BU of 3g9i by Molmil
GR DNA Binding domain: Pal complex-35
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3'), ...
Authors:Pufall, M.A, Yamamoto, K.R, Meijsing, S.H.
Deposit date:2009-02-13
Release date:2009-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:DNA binding site sequence directs glucocorticoid receptor structure and activity.
Science, 324, 2009

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