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6OSM
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BU of 6osm by Molmil
Cryo-EM structure of the N-terminally acetylated C-terminal Alpha-synuclein truncation Ac1-103
Descriptor: Alpha-synuclein
Authors:Xiaodan, N, Ryan, P.M, Jiansen, J, Jennifer, C.L.
Deposit date:2019-05-01
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Insights into alpha-Synuclein Fibril Polymorphism: Effects of Parkinson's Disease-Related C-Terminal Truncations.
J.Mol.Biol., 431, 2019
3ZRF
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BU of 3zrf by Molmil
pVHL54-213-EloB-EloC complex_apo
Descriptor: TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR,
Authors:Van Molle, I, Buckley, D.L, Crews, C.M, Ciulli, A.
Deposit date:2011-06-16
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Targeting the Von Hippel-Lindau E3 Ubiquitin Ligase Using Small Molecules to Disrupt the Vhl/Hif-1Alpha Interaction
J.Am.Chem.Soc., 134, 2012
3HV3
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BU of 3hv3 by Molmil
Human p38 MAP Kinase in Complex with RL49
Descriptor: 1-{4-[(6-aminoquinolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(3-methylphenyl)-1H-pyrazol-5-yl]urea, GLYCEROL, Mitogen-activated protein kinase 14, ...
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2009-06-15
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Displacement assay for the detection of stabilizers of inactive kinase conformations.
J.Med.Chem., 53, 2010
6Q7T
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BU of 6q7t by Molmil
ERK2 mini-fragment binding
Descriptor: 1,2-oxazol-3-amine, Mitogen-activated protein kinase 1, SULFATE ION
Authors:O'Reilly, M, Cleasby, A, Davies, T.G, Hall, R, Ludlow, F, Murray, C.W, Tisi, D, Jhoti, H.
Deposit date:2018-12-13
Release date:2019-06-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design.
Drug Discov Today, 24, 2019
1TR4
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BU of 1tr4 by Molmil
Solution structure of human oncogenic protein gankyrin
Descriptor: 26S proteasome non-ATPase regulatory subunit 10
Authors:Yuan, C, Li, J, Mahajan, A, Poi, M.J, Byeon, I.J, Tsai, M.D.
Deposit date:2004-06-19
Release date:2004-11-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the human oncogenic protein gankyrin containing seven ankyrin repeats and analysis of its structure--function relationship.
Biochemistry, 43, 2004
6QAH
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BU of 6qah by Molmil
ERK2 mini-fragment binding
Descriptor: 1-azanylpropylideneazanium, Mitogen-activated protein kinase 1, SULFATE ION
Authors:O'Reilly, M, Cleasby, A, Davies, T.G, Hall, R, Ludlow, F, Murray, C.W, Tisi, D, Jhoti, H.
Deposit date:2018-12-19
Release date:2019-06-26
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design.
Drug Discov Today, 24, 2019
5VTB
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BU of 5vtb by Molmil
Crystal structure of RBBP4 bound to BCL11a peptide
Descriptor: B-cell lymphoma/leukemia 11A, GLYCEROL, Histone-binding protein RBBP4
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2017-05-16
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Probing the interaction between the histone methyltransferase/deacetylase subunit RBBP4/7 and the transcription factor BCL11A in epigenetic complexes.
J. Biol. Chem., 293, 2018
4FMQ
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BU of 4fmq by Molmil
Crystal structure of human ERK2 complexed with a MAPK docking peptide
Descriptor: MAPK DOCKING PEPTIDE, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Gogl, G, Toeroe, I, Remenyi, A.
Deposit date:2012-06-18
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove.
Sci.Signal., 5, 2012
6OSJ
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BU of 6osj by Molmil
Cryo-EM structure of the N-terminally acetylated full length alpha-synuclein fibrils (Ac1-140)
Descriptor: Alpha-synuclein
Authors:Xiaodan, N, Ryan, P.M, Jiansen, J, Jennifer, C.L.
Deposit date:2019-05-01
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural Insights into alpha-Synuclein Fibril Polymorphism: Effects of Parkinson's Disease-Related C-Terminal Truncations.
J.Mol.Biol., 431, 2019
6OSL
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BU of 6osl by Molmil
Cryo-EM structure of the N-terminally acetylated C-terminal Alpha-synuclein truncation Ac1-122
Descriptor: Alpha-synuclein
Authors:Ni, X, McGlinchey, R.P, Jiang, J, Lee, J.C.
Deposit date:2019-05-01
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural Insights into alpha-Synuclein Fibril Polymorphism: Effects of Parkinson's Disease-Related C-Terminal Truncations.
J.Mol.Biol., 431, 2019
7UAS
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BU of 7uas by Molmil
Discovery of Potent Orally Bioavailable WD Repeat Domain 5 (WDR5) Inhibitors Using a Pharmacophore-Based Optimization
Descriptor: (5P)-2-[(S)-cyclopropyl(4-methylpyridin-2-yl)methyl]-5-[1-ethyl-3-(trifluoromethyl)-1H-pyrazol-4-yl]-7-[(2-methyl-1H-imidazol-1-yl)methyl]-3,4-dihydroisoquinolin-1(2H)-one, WD repeat-containing protein 5
Authors:Zhao, B.
Deposit date:2022-03-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:Discovery of Potent Orally Bioavailable WD Repeat Domain 5 (WDR5) Inhibitors Using a Pharmacophore-Based Optimization.
J.Med.Chem., 65, 2022
6O6W
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BU of 6o6w by Molmil
Solution structure of human myeloid-derived growth factor
Descriptor: Myeloid-derived growth factor
Authors:Bortnov, V, Tonelli, M, Lee, W, Markley, J.L, Mosher, D.F.
Deposit date:2019-03-07
Release date:2019-11-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of human myeloid-derived growth factor suggests a conserved function in the endoplasmic reticulum.
Nat Commun, 10, 2019
4GVA
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BU of 4gva by Molmil
ADP-bound form of the ERK2 kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Mitogen-activated protein kinase 1
Authors:Pozharski, E, Zhang, J, Shapiro, P.
Deposit date:2012-08-30
Release date:2012-09-12
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:ADP-bound form of the ERK2 kinase
TO BE PUBLISHED
1M3Q
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BU of 1m3q by Molmil
Crystal Structure of hogg1 D268E Mutant with Base-Excised DNA and 8-aminoguanine
Descriptor: 5'-D(*GP*CP*GP*TP*CP*CP*AP*(DRZ)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 8-AMINOGUANINE, ...
Authors:Chung, S.J, Verdine, G.L.
Deposit date:2002-06-28
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of End Products Resulting from Lesion Processing by a DNA Glycosylase/Lyase
Chem.Biol., 11, 2004
7DR4
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BU of 7dr4 by Molmil
Complex of anti-human IL-2 antibody and human IL-2
Descriptor: Interleukin-2, anti-human IL-2 antibody, mouse Ig G, ...
Authors:Kim, M.S, Kim, J.E.
Deposit date:2020-12-25
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of human interleukin-2 in complex with TCB2, a new antibody-drug candidate with antitumor activity.
Oncoimmunology, 10, 2021
7SID
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BU of 7sid by Molmil
Human ATM Dimer Bound to Nbs1
Descriptor: MAGNESIUM ION, Nibrin, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Warren, C, Pavletich, N.P.
Deposit date:2021-10-13
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structure of the human ATM kinase and mechanism of Nbs1 binding.
Elife, 11, 2022
7SIC
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BU of 7sic by Molmil
Human ATM Dimer
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine-protein kinase ATM
Authors:Warren, C, Pavletich, N.P.
Deposit date:2021-10-13
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Structure of the human ATM kinase and mechanism of Nbs1 binding.
Elife, 11, 2022
6RFP
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BU of 6rfp by Molmil
ERK2 MAP kinase with mutations at Helix-G
Descriptor: Mitogen-activated protein kinase 1
Authors:Livnah, O, Eitan-Wexler, M.
Deposit date:2019-04-16
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The bacterial metalloprotease NleD selectively cleaves mitogen-activated protein kinases that have high flexibility in their activation loop.
J.Biol.Chem., 295, 2020
4H3P
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BU of 4h3p by Molmil
Crystal structure of human ERK2 complexed with a MAPK docking peptide
Descriptor: Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribosomal protein S6 kinase alpha-1
Authors:Gogl, G, Toeroe, I, Remenyi, A.
Deposit date:2012-09-14
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein-peptide complex crystallization: a case study on the ERK2 mitogen-activated protein kinase
Acta Crystallogr.,Sect.D, 69, 2013
6RQ4
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BU of 6rq4 by Molmil
Inhibitor of ERK2
Descriptor: 6,6-dimethyl-2-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-5-(2-morpholin-4-ylethyl)thieno[2,3-c]pyrrol-4-one, Mitogen-activated protein kinase 1, SULFATE ION
Authors:O'Reilly, M.
Deposit date:2019-05-15
Release date:2019-12-04
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Dual-Mechanism ERK1/2 Inhibitors Exploit a Distinct Binding Mode to Block Phosphorylation and Nuclear Accumulation of ERK1/2.
Mol.Cancer Ther., 19, 2020
4GSB
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BU of 4gsb by Molmil
Monoclinic crystal form of the apo-ERK2
Descriptor: GLYCEROL, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Pozharski, E, Zhang, J, Shapiro, P.
Deposit date:2012-08-27
Release date:2012-09-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Monoclinic crystal form of the apo-ERK2
TO BE PUBLISHED
6R1T
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BU of 6r1t by Molmil
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 1, free nuclesome
Descriptor: DNA (147-MER), HISTONE H2A, Histone H2A, ...
Authors:Marabelli, C, Pilotto, S, Chittori, S, Subramaniam, S, Mattevi, A.
Deposit date:2019-03-15
Release date:2019-04-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.02 Å)
Cite:A Tail-Based Mechanism Drives Nucleosome Demethylation by the LSD2/NPAC Multimeric Complex.
Cell Rep, 27, 2019
3ZRC
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BU of 3zrc by Molmil
pVHL54-213-EloB-EloC complex (4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-N-[4-(1,3-OXAZOL-5-YL)BENZYL]-L-PROLINAMIDE bound
Descriptor: (4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-N-[4-(1,3-OXAZOL-5-YL)BENZYL]-L-PROLINAMIDE, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, ...
Authors:Van Molle, I, Buckley, D.L, Crews, C.M, Ciulli, A.
Deposit date:2011-06-15
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Targeting the Von Hippel-Lindau E3 Ubiquitin Ligase Using Small Molecules to Disrupt the Vhl/Hif-1Alpha Interaction
J.Am.Chem.Soc., 134, 2012
2HDE
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BU of 2hde by Molmil
Solution Structure of Human SAP18
Descriptor: Histone deacetylase complex subunit SAP18
Authors:McCallum, S.A, Yin, J.P, Pan, B, Fairbrother, W.J.
Deposit date:2006-06-20
Release date:2007-04-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of SAP18: a ubiquitin fold in histone deacetylase complex assembly.
Biochemistry, 45, 2006
4GT3
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BU of 4gt3 by Molmil
ATP-bound form of the ERK2 kinase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Pozharski, E, Zhang, J, Shapiro, P.
Deposit date:2012-08-28
Release date:2012-09-12
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:ATP-bound form of the ERK2 kinase
TO BE PUBLISHED

223532

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