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6FFS
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BU of 6ffs by Molmil
Structure-based design and synthesis of macrocyclic human rhinovirus 3C protease inhibitors
Descriptor: 3C Protease, SULFATE ION, ~{N}-[(2~{S},5~{S},14~{S})-2-[(4-fluorophenyl)methyl]-5-(hydroxymethyl)-9-methyl-3,8,15-tris(oxidanylidene)-1,4,9-triazacyclopentadec-14-yl]-5-methyl-1,2-oxazole-3-carboxamide
Authors:Wiesmann, C, Farady, C.
Deposit date:2018-01-09
Release date:2018-02-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-based design and synthesis of macrocyclic human rhinovirus 3C protease inhibitors.
Bioorg. Med. Chem. Lett., 28, 2018
6BDE
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BU of 6bde by Molmil
Crystal structure of Fe(II) unliganded H-NOX protein mutant A71G from K. algicida
Descriptor: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bruegger, J.J, Hespen, C.W, Marletta, M.A.
Deposit date:2017-10-22
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Native Alanine Substitution in the Glycine Hinge Modulates Conformational Flexibility of Heme Nitric Oxide/Oxygen (H-NOX) Sensing Proteins.
ACS Chem. Biol., 13, 2018
6LBV
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BU of 6lbv by Molmil
Crystal structure of barley exohydrolaseI W434F mutant in complex with methyl 6-thio-beta-gentiobioside
Descriptor: ACETATE ION, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL, ...
Authors:Luang, S, Streltsov, V.A, Hrmova, M.
Deposit date:2019-11-15
Release date:2020-09-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
5GNR
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BU of 5gnr by Molmil
the structure of mini-MFN1 K88A in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Lou, Z, Rao, Z, Hu, J.
Deposit date:2016-07-24
Release date:2016-11-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:BDLP-like folding of Mitofusin 1
To Be Published
4O10
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BU of 4o10 by Molmil
Structural and Biochemical Analyses of the Catalysis and Potency Impact of Inhibitor Phosphoribosylation by Human Nicotinamide Phosphoribosyltransferase
Descriptor: 1,2-ETHANEDIOL, N-{4-[(3,5-difluorophenyl)sulfonyl]benzyl}indolizine-7-carboxamide, Nicotinamide phosphoribosyltransferase, ...
Authors:Oh, A, Wang, W.
Deposit date:2013-12-14
Release date:2014-06-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and biochemical analyses of the catalysis and potency impact of inhibitor phosphoribosylation by human nicotinamide phosphoribosyltransferase.
Chembiochem, 15, 2014
6F4X
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BU of 6f4x by Molmil
Crystal structure of H. pylori purine nucleoside phosphorylase in complex with PO4 and formycin A
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 1,2-ETHANEDIOL, PHOSPHATE ION, ...
Authors:Stefanic, Z.
Deposit date:2017-11-30
Release date:2018-02-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.694 Å)
Cite:Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
6UKV
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BU of 6ukv by Molmil
STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound 9
Descriptor: 4-[6-(3-{[2-(3-carboxypropanoyl)-6-methoxy-1-benzothiophen-5-yl]oxy}propoxy)-5-methoxy-1-benzothiophen-2-yl]-4-oxobutanoic acid, fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-06
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
2AJY
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BU of 2ajy by Molmil
Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with ecgonine methyl ester and benzoic acid
Descriptor: 3-HYDROXY-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER, Antibody 7A1 Fab', BENZOIC ACID, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2005-08-02
Release date:2006-02-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Complete reaction cycle of a cocaine catalytic antibody at atomic resolution.
Structure, 14, 2006
3NEF
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BU of 3nef by Molmil
High-resolution pyrabactin-bound PYL1 structure
Descriptor: 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide, Abscisic acid receptor PYL1
Authors:Yan, N.
Deposit date:2010-06-08
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional mechanism of the ABA agonist pyrabactin
J.Biol.Chem., 285, 2010
3NEP
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BU of 3nep by Molmil
1.55A resolution structure of malate dehydrogenase from Salinibacter ruber
Descriptor: Malate dehydrogenase
Authors:Coquelle, N, Madern, D.
Deposit date:2010-06-09
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Gradual adaptive changes of a protein facing high salt concentrations.
J.Mol.Biol., 404, 2010
4NSV
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BU of 4nsv by Molmil
Lysobacter enzymogenes lysc endoproteinase K30R mutant covalently inhibited by TLCK
Descriptor: CHLORIDE ION, Lysyl endopeptidase, N-[(2S,3S)-7-amino-1-chloro-2-hydroxyheptan-3-yl]-4-methylbenzenesulfonamide (Bound Form), ...
Authors:Asztalos, P, Muller, A, Holke, W, Sobek, H, Rudolph, M.G.
Deposit date:2013-11-29
Release date:2014-04-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Atomic resolution structure of a lysine-specific endoproteinase from Lysobacter enzymogenes suggests a hydroxyl group bound to the oxyanion hole.
Acta Crystallogr.,Sect.D, 70, 2014
6B8X
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BU of 6b8x by Molmil
Multiconformer model of apo WT PTP1B with glycerol at 278 K
Descriptor: GLYCEROL, Tyrosine-protein phosphatase non-receptor type 1
Authors:Keedy, D.A, Hill, Z.B, Biel, J.T, Kang, E, Rettenmaier, T.J, Brandao-Neto, J, von Delft, F, Wells, J.A, Fraser, J.S.
Deposit date:2017-10-09
Release date:2018-06-20
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering.
Elife, 7, 2018
6H5A
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BU of 6h5a by Molmil
Crystal structure of Mycobacterium tuberculosis phosphatidylinositol phosphate synthase (PgsA1) in complex with manganese and citrate
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CDP-diacylglycerol--inositol 3-phosphatidyltransferase, CITRATE ANION, ...
Authors:Grave, K, Hogbom, M.
Deposit date:2018-07-24
Release date:2019-05-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure ofMycobacterium tuberculosisphosphatidylinositol phosphate synthase reveals mechanism of substrate binding and metal catalysis.
Commun Biol, 2, 2019
6H5J
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BU of 6h5j by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 4
Descriptor: (3~{R})-3,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Otero, J.M, Maneiro, M, Lence, E, Sanz-Gaitero, M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 6, 2019
6UIQ
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BU of 6uiq by Molmil
Crystal structure of wild-type human phosphoglucomutase 1 in complex with Glucose-6-Phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, phosphoglucomutase-1
Authors:Stiers, K.M, Beamer, L.J.
Deposit date:2019-10-01
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics.
Structure, 26, 2018
5FO5
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BU of 5fo5 by Molmil
Structure of the DNA-binding domain of Escherichia coli methionine biosynthesis regulator MetR
Descriptor: 1,2-ETHANEDIOL, HTH-TYPE TRANSCRIPTIONAL REGULATOR METR, MAGNESIUM ION
Authors:Punekar, A.S, Porter, J, Urbanowski, M.L, Stauffer, G.V, Carr, S.B, Phillips, S.E.
Deposit date:2015-11-18
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Basis for DNA Recognition by the Transcription Regulator Metr.
Acta Crystallogr.,Sect.F, 72, 2016
7YUF
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BU of 7yuf by Molmil
apo human SPNS2
Descriptor: NbFab H-chain, NbFab L-chain, Sphingosine-1-phosphate transporter SPNS2, ...
Authors:He, Y, Duan, Y.
Deposit date:2022-08-17
Release date:2023-09-06
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structural basis of Sphingosine-1-phosphate transport via human SPNS2.
Cell Res., 34, 2024
9J4P
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BU of 9j4p by Molmil
Regulatory domain and kinase domain of ALPK1 protein
Descriptor: Alpha-protein kinase 1, ZINC ION, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4S,5S,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Xu, C, Xu, T.
Deposit date:2024-08-09
Release date:2025-07-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Regulatory domain and kinase domain of ALPK1 protein
To Be Published
6B22
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BU of 6b22 by Molmil
Crystal structure OXA-24 beta-lactamase complexed with WCK 4234 by co-crystallization
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carbonitrile, Beta-lactamase, CHLORIDE ION
Authors:van den Akker, F, Nguyen, N.Q.
Deposit date:2017-09-19
Release date:2018-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234.
J. Med. Chem., 61, 2018
5FP4
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BU of 5fp4 by Molmil
Crystal structure of human KDM4D in complex with 3-(4- phenylbutanamido)pyridine-4-carboxylic acid
Descriptor: 3-(4-phenylbutanoylamino)pyridine-4-carboxylic acid, FE (II) ION, GLYCEROL, ...
Authors:Chung, C.
Deposit date:2015-11-27
Release date:2016-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cell Penetrant Inhibitors of the Kdm4 and Kdm5 Families of Histone Lysine Demethylases. 1. 3-Amino-4-Pyridine Carboxylate Derivatives.
J.Med.Chem., 59, 2016
6IVD
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BU of 6ivd by Molmil
TGEV nsp1 mutant - 91-95sg
Descriptor: nsp1 mutant protein
Authors:Shen, Z, Peng, G.Q.
Deposit date:2018-12-03
Release date:2019-08-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.975 Å)
Cite:A conserved region of nonstructural protein 1 from alphacoronaviruses inhibits host gene expression and is critical for viral virulence.
J.Biol.Chem., 294, 2019
6IVM
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BU of 6ivm by Molmil
Crystal structure of a membrane protein P143A
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Kittredge, A, Fukuda, F, Zhang, Y, Yang, T.
Deposit date:2018-12-04
Release date:2019-11-06
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Dual Ca2+-dependent gates in human Bestrophin1 underlie disease-causing mechanisms of gain-of-function mutations.
Commun Biol, 2, 2019
6IVX
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BU of 6ivx by Molmil
Discovery of the Second Generation ROR gamma Inhibitors Composed of an Azole Scaffold.
Descriptor: (4S)-4-[4'-cyclopropyl-5-(2,2-dimethylpropyl)[3,5'-bi-1,2-oxazol]-3'-yl]-6-[(2,4-dichlorophenyl)amino]-6-oxohexanoic acid, Nuclear receptor ROR-gamma, Nuclear receptor corepressor 2
Authors:Noguchi, M, Nomura, A, Doi, S, Adachi, T.
Deposit date:2018-12-04
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of Second Generation ROR gamma Inhibitors Composed of an Azole Scaffold.
J. Med. Chem., 62, 2019
7SMH
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BU of 7smh by Molmil
Structure of SASG A-domain (residues 163-419) from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Surface protein G
Authors:Atkin, K.E, Whelan, F, Brentnall, A.S, Dodson, E.J, Turkenburg, J.P, Potts, J.R.
Deposit date:2021-10-25
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Staphylococcal Periscope proteins Aap, SasG, and Pls project noncanonical legume-like lectin adhesin domains from the bacterial surface.
J.Biol.Chem., 299, 2023
6U0Y
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BU of 6u0y by Molmil
Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia
Descriptor: 1,2-ETHANEDIOL, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-15
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia
To Be Published

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