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158L
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BU of 158l by Molmil
CONTROL OF ENZYME ACTIVITY BY AN ENGINEERED DISULFIDE BOND
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Blaber, M, Matthews, B.W.
Deposit date:1994-06-20
Release date:1994-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alanine scanning mutagenesis of the alpha-helix 115-123 of phage T4 lysozyme: effects on structure, stability and the binding of solvent.
J.Mol.Biol., 246, 1995
180L
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BU of 180l by Molmil
PROTEIN FLEXIBILITY AND ADAPTABILITY SEEN IN 25 CRYSTAL FORMS OF T4 LYSOZYME
Descriptor: LYSOZYME
Authors:Kuroki, R, Weaver, L, Zhang, X.-J, Matthews, B.W.
Deposit date:1995-03-24
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme.
J.Mol.Biol., 250, 1995
1NCR
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BU of 1ncr by Molmil
The structure of Rhinovirus 16 when complexed with pleconaril, an antiviral compound
Descriptor: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, MYRISTIC ACID, ZINC ION, ...
Authors:Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
Deposit date:2002-12-05
Release date:2003-12-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
5CI9
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BU of 5ci9 by Molmil
Crystal structure of human Tob in complex with inhibitor fragment 6
Descriptor: 1-(propan-2-yl)-1H-benzimidazole-5-carboxylic acid, Protein Tob1, SODIUM ION
Authors:Bai, Y, Tashiro, S, Nagatoishi, S, Suzuki, T, Tsumoto, K, Bartlam, M, Yamamoto, T.
Deposit date:2015-07-11
Release date:2015-11-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of the Tob-CNOT7 interaction by a fragment screening approach
Protein Cell, 6, 2015
175L
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BU of 175l by Molmil
PROTEIN FLEXIBILITY AND ADAPTABILITY SEEN IN 25 CRYSTAL FORMS OF T4 LYSOZYME
Descriptor: T4 LYSOZYME
Authors:Baldwin, E, Matthews, B.W.
Deposit date:1995-03-24
Release date:1995-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme.
J.Mol.Biol., 250, 1995
5Y3N
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BU of 5y3n by Molmil
Structure of TRAP1 complexed with DN401
Descriptor: 1-[(6-bromanyl-1,3-benzodioxol-5-yl)methyl]-4-chloranyl-pyrazolo[3,4-d]pyrimidin-6-amine, Heat shock protein 75 kDa, mitochondrial
Authors:Jeong, H, Park, H.K, Kang, S, Kang, B.H, Lee, C.
Deposit date:2017-07-29
Release date:2017-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Paralog Specificity Determines Subcellular Distribution, Action Mechanism, and Anticancer Activity of TRAP1 Inhibitors.
J. Med. Chem., 60, 2017
6RY0
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BU of 6ry0 by Molmil
Crystal structure of Dfg5 from Chaetomium thermophilum
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, Mannan endo-1,6-alpha-mannosidase, ...
Authors:Essen, L.-O, Vogt, M.S.
Deposit date:2019-06-10
Release date:2020-08-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structural base for the transfer of GPI-anchored glycoproteins into fungal cell walls.
Proc.Natl.Acad.Sci.USA, 117, 2020
6IPF
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BU of 6ipf by Molmil
Post-catalytic Complex of Human DNA Polymerase Mu with Templating Cytosine and Mn-8oxodGMP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
5KHD
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BU of 5khd by Molmil
Structure of 1.75 A BldD C-domain-c-di-GMP complex
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein
Authors:Schumacher, M.
Deposit date:2016-06-14
Release date:2016-06-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7501 Å)
Cite:Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development.
Cell, 158, 2014
6RSX
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BU of 6rsx by Molmil
Regulatory Subunit of cAMP-dependant Protein Kinase A from Euglena gracilis at 1.6 A resolution
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Regulatory Subunit of Protein Kinase A (cAMP-dependent) from Euglena gracilis
Authors:Volpato Santos, Y, Ober, V, Basquin, J, Boshart, M.
Deposit date:2019-05-22
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Regulatory Subunit of Protein Kinase A (cAMP-dependent) from Euglena gracilis at 1.6 A resolution
To Be Published
6G0H
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BU of 6g0h by Molmil
BRD4 (BD1) in complex with APSC-derived ligands (e.g. SSLH01 a sulfasalazine derivate)
Descriptor: 1,2-ETHANEDIOL, 4-azanyl-2-oxidanyl-5-[(~{E})-[4-(pyridin-2-ylsulfamoyl)phenyl]diazenyl]benzoic acid, Bromodomain-containing protein 4, ...
Authors:Humbeck, L, Pretzel, J.
Deposit date:2018-03-18
Release date:2020-01-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.907 Å)
Cite:Discovery of an Unexpected Similarity in Ligand Binding Between BRD4 and PPARgamma
Chemrxiv, 2019
5KEW
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BU of 5kew by Molmil
Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt taurodeoxycholate
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, SULFATE ION, ...
Authors:Tomchick, D.R, Orth, K, Rivera-Cancel, G.
Deposit date:2016-06-10
Release date:2016-07-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Bile salt receptor complex activates a pathogenic type III secretion system.
Elife, 5, 2016
5Y2Y
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BU of 5y2y by Molmil
Crystal structure of HaloTag (M175C) complexed with dansyl-PEG2-HaloTag ligand
Descriptor: 5-(dimethylamino)-~{N}-[2-(2-hexoxyethoxy)ethyl]naphthalene-1-sulfonamide, CHLORIDE ION, Haloalkane dehalogenase
Authors:Lee, H, Kang, M, Rhee, H, Lee, C.
Deposit date:2017-07-27
Release date:2017-09-06
Last modified:2025-09-17
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-guided synthesis of a protein-based fluorescent sensor for alkyl halides
Chem. Commun. (Camb.), 53, 2017
4UOE
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BU of 4uoe by Molmil
Crystal Structure of Plasmodium Falciparum Spermidine Synthase in Complex with 5'-Deoxy-5'-Methylioadenosine and 4-Aminomethylaniline
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-(aminomethyl)aniline, 5'-DEOXY-5'-METHYLTHIOADENOSINE, ...
Authors:Sprenger, J, Halander, J.C, Svensson, B, Al-Karadaghi, S, Person, L.
Deposit date:2014-06-03
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Three-Dimensional Structures of Plasmodium Falciparum Spermidine Synthase with Bound Inhibitors Suggest New Strategies for Drug Design.
Acta Crystallogr.,Sect.D, 71, 2015
6ITT
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BU of 6itt by Molmil
Crystal structure of unactivated c-KIT in complex with compound
Descriptor: Mast/stem cell growth factor receptor Kit, N-(5-ethyl-1,2-oxazol-3-yl)-N'-[4-(2-{[6-(4-ethylpyrazin-1(4H)-yl)pyrimidin-4-yl]amino}-1,3-thiazol-5-yl)phenyl]urea
Authors:Wu, T.S, Wu, S.Y.
Deposit date:2018-11-26
Release date:2019-11-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Crystal structure of unactivated c-KIT in complex with compound
To Be Published
5YFB
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BU of 5yfb by Molmil
Crystal structure of a new DPP III family member
Descriptor: 1,2-ETHANEDIOL, Dipeptidyl peptidase 3, GLYCEROL, ...
Authors:Xu, T, Sun, Z, Liu, J.
Deposit date:2017-09-20
Release date:2018-01-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Aflatoxin-oxidase from Armillariella tabescens reveal a dual activity enzyme.
Biochem. Biophys. Res. Commun., 494, 2017
2W4F
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BU of 2w4f by Molmil
CRYSTAL STRUCTURE OF THE FIRST PDZ DOMAIN OF HUMAN SCRIB1
Descriptor: 1,2-ETHANEDIOL, PROTEIN LAP4
Authors:Hozjan, V, Pilka, E.S, Roos, A.K, W Yue, W, Phillips, C, Bray, J, Cooper, C, Salah, E, Elkins, J.M, Muniz, J.R.C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, von Delft, F, Bountra, C, Doyle, D.A, Oppermann, U.
Deposit date:2008-11-25
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of the First Pdz Domain of Human Scrib1
To be Published
5YG0
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BU of 5yg0 by Molmil
Plasmodium vivax SHMT bound with PLP-glycine and GS657
Descriptor: 2-[1-[3-[(4~{S})-6-azanyl-5-cyano-3-methyl-4-propan-2-yl-2~{H}-pyrano[2,3-c]pyrazol-4-yl]-5-(trifluoromethyl)phenyl]piperidin-4-yl]ethanoic acid, CHLORIDE ION, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], ...
Authors:Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U, Schwertz, G, Diederich, F.
Deposit date:2017-09-22
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:to be published
to be published
9E30
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BU of 9e30 by Molmil
Discovery of Potent, Highly Selective and Efficacious SMARCA2 Degraders - Compound 13
Descriptor: (12'S)-4'-chloro-10'-(piperidin-4-yl)-5'H-spiro[cyclohexane-1,7'-indolo[1,2-a]quinazolin]-5'-one, ACETATE ION, Isoform Short of Probable global transcription activator SNF2L2, ...
Authors:Strickland, C, Rice, C.
Deposit date:2024-10-23
Release date:2024-12-18
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Discovery of Potent, Highly Selective, and Efficacious SMARCA2 Degraders.
J.Med.Chem., 68, 2025
6MN0
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BU of 6mn0 by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H168A mutant in complex with acetyl-CoA
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETYL COENZYME *A, Aminoglycoside N(3)-acetyltransferase, ...
Authors:Stogios, P.J, Skarina, T, Zu, X, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
5CAN
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BU of 5can by Molmil
EGFR kinase domain mutant "TMLR" with compound 27
Descriptor: (3R)-3-methyl-1-(4-{[2-methyl-1-(propan-2-yl)-1H-imidazo[4,5-c]pyridin-6-yl]amino}pyrimidin-2-yl)pyrrolidine-3-carboxamide, Epidermal growth factor receptor, SULFATE ION
Authors:Eigenbrot, C, Yu, C.
Deposit date:2015-06-29
Release date:2015-10-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Noncovalent Mutant Selective Epidermal Growth Factor Receptor Inhibitors: A Lead Optimization Case Study.
J.Med.Chem., 58, 2015
5LG9
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BU of 5lg9 by Molmil
Structure of PfIMP2 (Immune Mapped Protein 2 from Plasmodium falciparum) - an antigenic protein
Descriptor: Uncharacterized protein
Authors:Benjamin, S.V, Matthews, S.J.
Deposit date:2016-07-06
Release date:2016-12-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Toxoplasma gondii immune mapped protein 1 is anchored to the inner leaflet of the plasma membrane and adopts a novel protein fold.
Biochim. Biophys. Acta, 1865, 2016
5LH4
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BU of 5lh4 by Molmil
Trypsin inhibitors for the treatment of pancreatitis - cpd 1
Descriptor: (2~{S},4~{S})-1-[4-(aminomethyl)phenyl]carbonyl-4-(4-cyclopropyl-1,2,3-triazol-1-yl)-~{N}-(2,2-diphenylethyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Schiering, N, D'Arcy, A, Skaanderup, P, Simic, O, Brandl, T, Woelcke, J.
Deposit date:2016-07-08
Release date:2018-01-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Trypsin inhibitors for the treatment of pancreatitis.
Bioorg. Med. Chem. Lett., 26, 2016
7XEZ
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BU of 7xez by Molmil
NMR solution structures of p300 TAZ2 domain in complex with BRD4-NUT F1c domain binding motif #2
Descriptor: Histone acetyltransferase p300,NUT family member 1, ZINC ION
Authors:Yu, D, Zeng, L, Zhou, M.-M.
Deposit date:2022-03-31
Release date:2023-04-12
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural mechanism of BRD4-NUT and p300 bipartite interaction in propagating aberrant gene transcription in chromatin in NUT carcinoma.
Nat Commun, 14, 2023
3J1V
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BU of 3j1v by Molmil
A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
Descriptor: Protein InvG
Authors:Sgourakis, N.G, Bergeron, J.R.C, Strynadka, N.J.C, Baker, D.
Deposit date:2012-07-08
Release date:2013-05-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013

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