PDB: 45522 resultsInfo pagesStatus searchChemie searchBIRD

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3T3V	Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with Bumped Kinase Inhibitor, RM-1-87 Descriptor: 1,2-ETHANEDIOL, 3-(6-methoxynaphthalen-2-yl)-1-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Calmodulin-domain protein kinase 1 Authors: Larson, E.T, Merritt, E.A. Deposit date: 2011-07-25 Release date: 2012-03-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1. J.Med.Chem., 55, 2012
3SY7	Improved crystal structure of Pseudomonas aeruginosa OprD Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin D Authors: van den Berg, B, Eren, E. Deposit date: 2011-07-15 Release date: 2012-02-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Substrate Specificity within a Family of Outer Membrane Carboxylate Channels. Plos Biol., 10, 2012
2WHE	Structure of native Beta-Phosphoglucomutase in an open conformation without bound ligands. Descriptor: BETA-PHOSPHOGLUCOMUTASE, MAGNESIUM ION Authors: Bowler, M.W, Baxter, N.J, Webster, C.E, Pollard, S, Alizadeh, T, Hounslow, A.M, Cliff, M.J, Bermel, W, Williams, N.H, Hollfelder, F, Blackburn, G.M, Waltho, J.P. Deposit date: 2009-05-04 Release date: 2009-09-15 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Atomic Details of Near-Transition State Conformers for Enzyme Phosphoryl Transfer Revealed by Mgf-3 Rather Than by Phosphoranes. Proc.Natl.Acad.Sci.USA, 107, 2010
2WHK	Structure of Bacillus subtilis mannanase man26 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, GLYCEROL, ... Authors: Ducros, V.M.A, Davies, G.J. Deposit date: 2009-05-05 Release date: 2009-05-26 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Understanding How Diverse -Mannanases Recognise Heterogeneous Substrates. Biochemistry, 48, 2009
3DE7	Proteinase K by Classical hanging drop method after the fourth step of high X-Ray dose on ESRF ID23-1 beamline Descriptor: CALCIUM ION, Proteinase K Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-06-08 Release date: 2009-06-09 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Radiation stability of proteinase K crystals grown by LB nanotemplate method J.Struct.Biol., 168, 2009
3DE4	Proteinase K by Classical hanging drop method after the first step of high X-Ray dose on ESRF ID23-1 beamline Descriptor: CALCIUM ION, Proteinase K Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-06-08 Release date: 2009-06-09 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Radiation stability of proteinase K crystals grown by LB nanotemplate method J.Struct.Biol., 168, 2009
3DET	Structure of the E148A, Y445A doubly ungated mutant of E.coli CLC_Ec1, Cl-/H+ antiporter Descriptor: Fab fragment, Heavy chain, Light chain, ... Authors: Jayaram, H, Accardi, A, Wu, F, Williams, C, Miller, C. Deposit date: 2008-06-10 Release date: 2008-06-17 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Ion permeation through a Cl--selective channel designed from a CLC Cl-/H+ exchanger Proc.Natl.Acad.Sci.USA, 105, 2008
3SYB	Crystal structure of Pseudomonas aeruginosa OccD3 (OpdP) Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Glycine-glutamate dipeptide porin OpdP, SULFATE ION Authors: van den Berg, B, Eren, E. Deposit date: 2011-07-16 Release date: 2012-02-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Substrate Specificity within a Family of Outer Membrane Carboxylate Channels. Plos Biol., 10, 2012
2WHF	Interaction of Mycobacterium tuberculosis CYP130 with heterocyclic arylamines Descriptor: 1-(3-METHYLPHENYL)-1H-BENZIMIDAZOL-5-AMINE, PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 130 Authors: Podust, L.M, Ouellet, H, von Kries, J.P, Ortiz de Montellano, P.R. Deposit date: 2009-05-04 Release date: 2009-07-14 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Interaction of Mycobacterium tuberculosis CYP130 with heterocyclic arylamines. J. Biol. Chem., 284, 2009
3DW3	Proteinase K by Classical hanging drop method before high X Ray dose on ESRF ID 14-2 beamline Descriptor: CALCIUM ION, Proteinase K Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-07-21 Release date: 2009-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (0.99 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3E12	Cu2+ substituted Aquifex aeolicus KDO8PS in complex with KDO8P Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, 3-deoxy-8-O-phosphono-D-manno-oct-2-ulosonic acid, ACETATE ION, ... Authors: Gatti, D.L. Deposit date: 2008-08-01 Release date: 2009-05-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis. Biochemistry, 48, 2009
3T24	Crystal structure of Pseudomonas aeruginosa OpdQ Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin Authors: van den Berg, B, Eren, E. Deposit date: 2011-07-22 Release date: 2012-02-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Substrate Specificity within a Family of Outer Membrane Carboxylate Channels. Plos Biol., 10, 2012
3T4S	Arabidopsis histidine kinase 4 sensor domain in complex with kinetin Descriptor: Histidine kinase 4, MALONATE ION, N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE Authors: Hothorn, M. Deposit date: 2011-07-26 Release date: 2011-10-05 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for cytokinin recognition by Arabidopsis thaliana histidine kinase 4. Nat.Chem.Biol., 7, 2011
3DZP	Thaumatin by LB nanotemplate method after high X-Ray dose on ESRF ID29 beamline Descriptor: L(+)-TARTARIC ACID, Thaumatin-1 Authors: Tripathi, S, Pechkova, E, Nicolini, C. Deposit date: 2008-07-30 Release date: 2009-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3DLV	Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus. Descriptor: Signal recognition particle 19 kDa protein Authors: Egea, P.F, Napetschnig, J, Walter, P, Stroud, R.M. Deposit date: 2008-06-29 Release date: 2008-11-04 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Structures of SRP54 and SRP19, the two proteins that organize the ribonucleic core of the signal recognition particle from Pyrococcus furiosus. Plos One, 3, 2008
3SQW	Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ... Authors: Del Campo, M, Lambowitz, A.M. Deposit date: 2011-07-06 Release date: 2011-10-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.909 Å) Cite: High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p. J.Mol.Biol., 413, 2011
3DNA	Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant (seleno version) Descriptor: 2-HYDROXYETHYL DISULFIDE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... Authors: Liu, L, Matthews, B.W. Deposit date: 2008-07-01 Release date: 2008-11-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding. J.Mol.Biol., 385, 2009
3THF	Crystal structure of the SD2 domain from Drosophila Shroom Descriptor: Protein Shroom Authors: Mohan, S, VanDemark, A.P. Deposit date: 2011-08-18 Release date: 2012-06-06 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.6951 Å) Cite: Structure of Shroom domain 2 reveals a three-segmented coiled-coil required for dimerization, Rock binding, and apical constriction. Mol Biol Cell, 23, 2012
3THT	Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B Descriptor: 2-OXOGLUTARIC ACID, Alkylated DNA repair protein alkB homolog 8, MANGANESE (II) ION, ... Authors: Pastore, C, Topalidou, I, Forouhar, F, Yan, A.C, Levy, M, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) Deposit date: 2011-08-19 Release date: 2011-11-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.01 Å) Cite: Crystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification. J.Biol.Chem., 287, 2012
3STX	Crystal Structure of tomato Methylketone Synthase I H243A variant complexed with beta-ketoheptanoate Descriptor: 3-oxoheptanoic acid, Methylketone synthase 1 Authors: Auldridge, M.E, Austin, M.B, Noel, J.P. Deposit date: 2011-07-11 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Emergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato. Plant Cell, 24, 2012
3SUY	Crystal structure of THF riboswitch, unbound status Descriptor: riboswitch Authors: Huang, L, Serganov, A, Patel, D.J. Deposit date: 2011-07-11 Release date: 2011-09-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.21 Å) Cite: Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch. Proc.Natl.Acad.Sci.USA, 108, 2011
2WBO	Crystal structure of VioC in complex with L-arginine Descriptor: ARGININE, FE (II) ION, L(+)-TARTARIC ACID, ... Authors: Helmetag, V, Samel, S.A, Thomas, M.G, Marahiel, M.A, Essen, L.-O. Deposit date: 2009-03-02 Release date: 2009-06-23 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural Basis for the Erythro-Stereospecificity of the L-Arginine Oxygenase Vioc in Viomycin Biosynthesis. FEBS J., 276, 2009
3STY	Crystal Structure of tomato Methylketone Synthase I T18A mutant Descriptor: DECANOIC ACID, Methylketone synthase 1 Authors: Auldridge, M.E, Austin, M.B, Noel, J.P. Deposit date: 2011-07-11 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Emergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato. Plant Cell, 24, 2012
3DIK	Pseudo-atomic model of the HIV-1 CA hexameric lattice Descriptor: Capsid protein p24 Authors: Ganser-Pornillos, B.K, Cheng, A, Yeager, M. Deposit date: 2008-06-20 Release date: 2008-09-16 Last modified: 2024-02-21 Method: ELECTRON CRYSTALLOGRAPHY (9 Å) Cite: Structure of full-length HIV-1 CA: a model for the mature capsid lattice Cell(Cambridge,Mass.), 131, 2007
3SUR	Crystal structure of beta-hexosaminidase from Paenibacillus sp. TS12 in complex with NAG-thiazoline. Descriptor: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, Beta-hexosaminidase, SULFATE ION Authors: Sumida, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2011-07-11 Release date: 2012-06-06 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Gaining insight into the inhibition of glycoside hydrolase family 20 exo-beta-N-acetylhexosaminidases using a structural approach Org.Biomol.Chem., 10, 2012

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