Cu2+ substituted Aquifex aeolicus KDO8PS in complex with KDO8P

Summary for 3E12

Related1FSW 1FWW 3E0I
Descriptor2-dehydro-3-deoxyphosphooctonate aldolase, COPPER (II) ION, PHOSPHATE ION, ... (6 entities in total)
Functional Keywordskdo, kdo8ps, copper, pep, metal geometry, cytoplasm, lipopolysaccharide biosynthesis, transferase
Biological sourceAquifex aeolicus
Cellular locationCytoplasm (By similarity) O66496
Total number of polymer chains2
Total molecular weight60561.23
Gatti, D.L. (deposition date: 2008-08-01, release date: 2009-05-12, Last modification date: 2011-07-13)
Primary citation
Kona, F.,Tao, P.,Martin, P.,Xu, X.,Gatti, D.L.
Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis.
Biochemistry, 48:3610-3630, 2009
PubMed: 19228070 (PDB entries with the same primary citation)
DOI: 10.1021/bi801955h
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers140 3.7% 4.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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PDB entries from 2020-10-14