PDB: 5515 resultsInfo pagesStatus searchChemie searchBIRD

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4NTP	Crystal structure of macrocycles containing A 17-23 (LV(PHI)FAED) and A 30-36 (AII(SAR)L(ORN)V) Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LV(PHI)FAED(ORN)AII(SAR)L(ORN)V, SODIUM ION Authors: Nowick, J.S, Spencer, R.K, Li, H. Deposit date: 2013-12-02 Release date: 2014-04-02 Last modified: 2020-10-21 Method: X-RAY DIFFRACTION (1.987 Å) Cite: X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36). J.Am.Chem.Soc., 136, 2014
8SKD	Solution Structure of the model miniprotein EEHEE_rd4_0871 Descriptor: Miniprotein EEHEE_rd4_0871 Authors: Houliston, S, Carter, L, Baker, D, Arrowsmith, C.H, Rocklin, G. Deposit date: 2023-04-19 Release date: 2024-04-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution Structure of the model miniprotein EEHEE_rd4_0871 To Be Published
8SKX	Solution structure of the model miniprotein HHH_rd4_0518 Descriptor: Miniprotein HHH_rd4_0518 Authors: Houliston, S, Carter, L, Baker, D, Arrowsmith, C.H, Rocklin, G. Deposit date: 2023-04-20 Release date: 2024-04-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of the model miniprotein HHH_rd4_0518 To Be Published
8SKE	Solution structure of the model miniprotein EEHEE_rd4_0642 Descriptor: Miniprotein EEHEE_rd4_0642 Authors: Houliston, S, Carter, L, Baker, D, Arrowsmith, C.H, Rocklin, G. Deposit date: 2023-04-19 Release date: 2024-04-24 Last modified: 2024-05-15 Method: SOLID-STATE NMR Cite: Solution structure of the model miniprotein EEHEE_rd4_0642 To Be Published
4NEY	Crystal Structure of an engineered protein with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR277 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Engineered protein OR277, tetrabutylphosphonium Authors: Guan, R, Lin, Y.-R, Koga, N, Koga, R, Castellanos, J, Seetharaman, J, Maglaqui, M, Sahdev, S, Mao, L, Xiao, R, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) Deposit date: 2013-10-30 Release date: 2014-01-15 Method: X-RAY DIFFRACTION (2.323 Å) Cite: Northeast Structural Genomics Consortium Target OR277 To be published
4NDK	Crystal structure of a computational designed engrailed homeodomain variant fused with YFP Descriptor: E23P-YFP, GFP-like fluorescent chromoprotein FP506, related, ... Authors: Mou, Y, Mayo, S.L. Deposit date: 2013-10-26 Release date: 2014-11-05 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015
3PG0	Crystal structure of designed 3-fold symmetric protein, ThreeFoil Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, SODIUM ION, ... Authors: Lobsanov, Y.D, Broom, A, Howell, P.L, Rose, D.R, Meiering, E.M. Deposit date: 2010-10-29 Release date: 2011-12-21 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.62 Å) Cite: Modular evolution and the origins of symmetry: reconstruction of a three-fold symmetric globular protein. Structure, 20, 2012
4NEZ	Crystal Structure of an engineered protein with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR276 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Engineered protein OR276, tetrabutylphosphonium Authors: Guan, R, Lin, Y.-R, Koga, N, Koga, R, Castellanos, J, Seetharaman, J, Maglaqui, M, Sahdev, S, Mao, L, Xiao, R, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) Deposit date: 2013-10-30 Release date: 2014-01-15 Method: X-RAY DIFFRACTION (2.395 Å) Cite: Northeast Structural Genomics Consortium Target OR276 To be published
4PIV	Human Fatty Acid Synthase Psi/KR Tri-Domain with NADPH and GSK2194069 Descriptor: 4-[4-(1-benzofuran-5-yl)phenyl]-5-{[(3S)-1-(cyclopropylcarbonyl)pyrrolidin-3-yl]methyl}-2,4-dihydro-3H-1,2,4-triazol-3-one, CACODYLATE ION, Fatty acid synthase, ... Authors: Williams, S.P, Wang, L, Brown, K.K, Parrish, C.A, Hardwicke, M.A. Deposit date: 2014-05-09 Release date: 2014-07-23 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.299 Å) Cite: A human fatty acid synthase inhibitor binds beta-ketoacyl reductase in the keto-substrate site. Nat.Chem.Biol., 10, 2014
6U47	Coiled-coil Trimer with Glu:Ala:Lys Triad Descriptor: peptide with Glu:Ala:Lys triad Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-08-23 Release date: 2020-04-29 Last modified: 2020-05-20 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
3PGF	Crystal structure of maltose bound MBP with a conformationally specific synthetic antigen binder (sAB) Descriptor: GLYCEROL, IMIDAZOLE, Maltose-binding periplasmic protein, ... Authors: Kossiakoff, A.A, Duguid, E.M, Sandstrom, A. Deposit date: 2010-11-01 Release date: 2011-03-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Allosteric control of ligand-binding affinity using engineered conformation-specific effector proteins. Nat.Struct.Mol.Biol., 18, 2011
4P4Y	Hexamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVT(MAA)TVK Descriptor: CHLORIDE ION, CYCLIC HEXADECAPEPTIDE (ORN)YLL(PHI)YTE(ORN)KVT(MAA)TVK, SULFATE ION Authors: Spencer, R.K, Li, H, Nowick, J.S. Deposit date: 2014-03-13 Release date: 2015-05-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.509 Å) Cite: X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc., 137, 2015
6V4Y	Coiled-coil Trimer with Glu:Tyr:Lys Triad with a K7A mutation Descriptor: Coiled-coil Trimer with Glu:Tyr:Lys Triad with a K7A mutation Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-02 Release date: 2020-04-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4PJQ	Crystal structure of designed cPPR-polyG protein Descriptor: Pentatricopeptide repeat protein Authors: Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O. Deposit date: 2014-05-12 Release date: 2014-12-24 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.353 Å) Cite: An artificial PPR scaffold for programmable RNA recognition. Nat Commun, 5, 2014
4PJS	Crystal structure of designed (SeMet)-cPPR-NRE protein Descriptor: CALCIUM ION, Pentatricopeptide repeat protein Authors: Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O. Deposit date: 2014-05-12 Release date: 2014-12-24 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.6 Å) Cite: An artificial PPR scaffold for programmable RNA recognition. Nat Commun, 5, 2014
6V50	Coiled-coil Trimer with Glu:Ser:Lys Triad with K7A mutation Descriptor: Coiled-coil Trimer with Glu:Ser:Lys Triad with K7A mutation Authors: Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. Deposit date: 2019-12-02 Release date: 2020-04-29 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.285 Å) Cite: Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6SS3	Kemp Eliminase HG3.17 mutant Q50K, E47N, N300D Complexed with Transition State Analog 6-Nitrobenzotriazole Descriptor: 6-NITROBENZOTRIAZOLE, GLYCEROL, Kemp Eliminase HG3.17 Q50K, ... Authors: Bloch, J.S, Pinkas, D.M, Hilvert, D. Deposit date: 2019-09-06 Release date: 2020-04-01 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Contribution of Oxyanion Stabilization to Kemp Eliminase Efficiencyproficiency Acs Catalysis, 2020
8T0G	Backbone Dialkylation in Peptide Hairpins: Natural Backbone Prototype Descriptor: Immunoglobulin G-binding protein G Authors: Heath, S.L, Horne, W.S, Lengyel, G.A. Deposit date: 2023-06-01 Release date: 2023-08-16 Method: SOLUTION NMR Cite: Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability. Org.Biomol.Chem., 21, 2023
8T0H	Backbone Dialkylation in Peptide Hairpins: (S)-Ethylpropylglycine variant Descriptor: Immunoglobulin G-binding protein G Authors: Heath, S.L, Horne, W.S, Lengyel, G.A. Deposit date: 2023-06-01 Release date: 2023-08-16 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability. Org.Biomol.Chem., 21, 2023
4NW8	Crystal structure of macrocycles containing Abeta17-23 (LV(PHI)(MEA)AED) and Abeta30-36 (AIIGL(ORN)V) Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LV(PHI)(MEA)AED(ORN)AIIGL(ORN)V, SODIUM ION Authors: Spencer, R.K, Li, H, Nowick, J.S. Deposit date: 2013-12-05 Release date: 2014-04-02 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.02 Å) Cite: X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36). J.Am.Chem.Soc., 136, 2014
8T0I	Backbone Dialkylation in Peptide Hairpins: (R)-Ethylpropylglycine variant Descriptor: Immunoglobulin G-binding protein G Authors: Heath, S.L, Horne, W.S, Lengyel, G.A. Deposit date: 2023-06-01 Release date: 2023-08-16 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability. Org.Biomol.Chem., 21, 2023
4PQ8	Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR465 Descriptor: CHLORIDE ION, DESIGNED PROTEIN OR465 Authors: Vorobiev, S, Parmeggiani, F, Seetharaman, J, Janjua, H, Xiao, R, Maglaqui, M, Park, K, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J, Northeast Structural Genomics Consortium (NESG) Deposit date: 2014-02-28 Release date: 2014-03-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.833 Å) Cite: Crystal Structure of Engineered Protein OR465. To be Published
4PSJ	Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium (NESG) Target OR464. Descriptor: OR464 Authors: Vorobiev, S, Parmeggiani, F, Seetharaman, J, Huang, P.-S, Janjua, H, Xiao, R, Maglaqui, M, Park, K, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J, Northeast Structural Genomics Consortium (NESG) Deposit date: 2014-03-07 Release date: 2014-03-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.992 Å) Cite: Crystal Structure of Engineered Protein OR464. To be Published
6TJF	Crystal structure of the computationally designed Cake6 protein Descriptor: Cake6, GLYCEROL Authors: Mylemans, B, Laier, I, Voet, A.R.D, Noguchi, H. Deposit date: 2019-11-26 Release date: 2020-05-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
6TT6	Solution structure of PD-i6 peptide inhibitor of the human PD-1 extracellular domain Descriptor: PD-i6 peptide Authors: Guardiola, S, Varese, M, Garcia, J, Giralt, E. Deposit date: 2019-12-23 Release date: 2021-01-13 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Solution structure of PD-i6 peptide targeting the human PD-1 extracellular domain To Be Published

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