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8AY7
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BU of 8ay7 by Molmil
X-RAY CRYSTAL STRUCTURE OF THE CsPYL1(V112L, T135L,F137I, T153I, V168A)-iSB7-HAB1 TERNARY COMPLEX
Descriptor: Abscisic acid receptor PYL1, CHLORIDE ION, GLYCEROL, ...
Authors:Infantes, L, Albert, A.
Deposit date:2022-09-02
Release date:2023-03-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.131 Å)
Cite:Structure-guided engineering of a receptor-agonist pair for inducible activation of the ABA adaptive response to drought.
Sci Adv, 9, 2023
7V5G
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BU of 7v5g by Molmil
20S+monoUb-CyclinB1-NT (S1)
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Xu, C, Cong, Y.
Deposit date:2021-08-17
Release date:2021-09-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.47 Å)
Cite:The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag.
Nat Commun, 12, 2021
7V5M
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BU of 7v5m by Molmil
20S+monoUb-CyclinB1-NT (S2)
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Xu, C, Cong, Y.
Deposit date:2021-08-17
Release date:2021-09-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag.
Nat Commun, 12, 2021
7VLX
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BU of 7vlx by Molmil
Cryo-EM structures of Listeria monocytogenes man-PTS
Descriptor: Mannose/fructose/sorbose family PTS transporter subunit IIC, PTS mannose family transporter subunit IID, alpha-D-mannopyranose
Authors:Wang, J.W.
Deposit date:2021-10-05
Release date:2021-12-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural Basis of Pore Formation in the Mannose Phosphotransferase System by Pediocin PA-1.
Appl.Environ.Microbiol., 88, 2022
7SVL
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BU of 7svl by Molmil
DPP9 IN COMPLEX WITH LIGAND ICeD-2
Descriptor: (2S)-2-amino-1-(1,3-dihydro-2H-isoindol-2-yl)-2-[(1r,4S)-4-(pyrrolidin-1-yl)cyclohexyl]ethan-1-one, Dipeptidyl peptidase 9
Authors:Lammens, A, Hollenstein, K, Klein, D.J.
Deposit date:2021-11-19
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:A Phenotypic Screen Identifies Potent DPP9 Inhibitors Capable of Killing HIV-1 Infected Cells.
Acs Chem.Biol., 17, 2022
7VLY
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BU of 7vly by Molmil
Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1
Descriptor: Bacteriocin pediocin PA-1, Mannose/fructose/sorbose family PTS transporter subunit IIC, PTS mannose family transporter subunit IID, ...
Authors:Wang, J.W.
Deposit date:2021-10-05
Release date:2021-12-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Structural Basis of Pore Formation in the Mannose Phosphotransferase System by Pediocin PA-1.
Appl.Environ.Microbiol., 88, 2022
7VI9
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BU of 7vi9 by Molmil
Cryo-EM structure of bacteriophage lambda procapsid at 5.03 Angstrom
Descriptor: Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-26
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (5.03 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
7VII
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BU of 7vii by Molmil
cryoEM structure of bacteriophage lambda capsid at 5.6 Angstrom
Descriptor: Capsid decoration protein, Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-27
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
7VIA
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BU of 7via by Molmil
Focused refinement of asymmetric unit of bacteriophage lambda procapsid at 3.88 Angstrom
Descriptor: Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-26
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
7VIK
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BU of 7vik by Molmil
Asymmetric unit of cryoEM structure of bacteriophage lambda capsid at 3.76 Angstrom
Descriptor: Capsid decoration protein, Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-27
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
2GZ7
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BU of 2gz7 by Molmil
Structure-Based Drug Design and Structural Biology Study of Novel Nonpeptide Inhibitors of SARS-CoV Main Protease
Descriptor: 2-[(2,4-DICHLORO-5-METHYLPHENYL)SULFONYL]-1,3-DINITRO-5-(TRIFLUOROMETHYL)BENZENE, Replicase polyprotein 1ab
Authors:Lu, I.L, Wu, S.Y.
Deposit date:2006-05-11
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Structure-Based Drug Design and Structural Biology Study of Novel Nonpeptide Inhibitors of Severe Acute Respiratory Syndrome Coronavirus Main Protease
J.Med.Chem., 49, 2006
5A7J
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BU of 5a7j by Molmil
Crystal structure of INPP5B in complex with benzene 1,2,4,5- tetrakisphosphate
Descriptor: (2,4,5-triphosphonooxyphenyl) dihydrogen phosphate, GLYCEROL, SULFATE ION, ...
Authors:Tresaugues, L, Mills, S.J, Silvander, C, Cozier, G, Potter, B.V.L, Nordlund, P.
Deposit date:2015-07-06
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures of Type-II Inositol Polyphosphate 5-Phosphatase Inpp5B with Synthetic Inositol Polyphosphate Surrogates Reveal New Mechanistic Insights for the Inositol 5-Phosphatase Family.
Biochemistry, 55, 2016
7VLQ
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BU of 7vlq by Molmil
Crystal structure of SARS-Cov-2 main protease in complex with PF07321332 in spacegroup P212121
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Zhou, X.L, Zhong, F.L, Lin, C, Zhang, J, Li, J.
Deposit date:2021-10-05
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.939106 Å)
Cite:Structural Basis of the Main Proteases of Coronavirus Bound to Drug Candidate PF-07321332.
J.Virol., 96, 2022
7VTC
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BU of 7vtc by Molmil
Crystal structure of MERS main protease in complex with PF07321332
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Lin, C, Zhong, F.L, Zhou, X.L, Zhang, J, Li, J.
Deposit date:2021-10-28
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.53865623 Å)
Cite:Structural Basis of the Main Proteases of Coronavirus Bound to Drug Candidate PF-07321332.
J.Virol., 96, 2022
7VLO
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BU of 7vlo by Molmil
Crystal structure of SARS coronavirus main protease in complex with PF07321332
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Lin, C, Zhong, F.L, Zhou, X.L, Li, J, Zhang, J.
Deposit date:2021-10-05
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.0227 Å)
Cite:Structural Basis of the Main Proteases of Coronavirus Bound to Drug Candidate PF-07321332.
J.Virol., 96, 2022
7VLP
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BU of 7vlp by Molmil
Crystal structure of SARS-Cov-2 main protease in complex with PF07321332 in spacegroup P1211
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, Replicase polyprotein 1a
Authors:Zhou, X.L, Zhong, F.L, Lin, C, Li, J, Zhang, J.
Deposit date:2021-10-05
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.50251937 Å)
Cite:Structural Basis of the Main Proteases of Coronavirus Bound to Drug Candidate PF-07321332.
J.Virol., 96, 2022
4YVX
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BU of 4yvx by Molmil
Crystal structure of AKR1C3 complexed with glimepiride
Descriptor: 3-ethyl-4-methyl-N-[2-(4-{[(cis-4-methylcyclohexyl)carbamoyl]sulfamoyl}phenyl)ethyl]-2-oxo-2,5-dihydro-1H-pyrrole-1-car boxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhao, Y, Zheng, X, Zhang, H, Hu, X.
Deposit date:2015-03-20
Release date:2015-11-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:In vitro inhibition of AKR1Cs by sulphonylureas and the structural basis
Chem.Biol.Interact., 240, 2015
2DEF
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BU of 2def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES
Descriptor: NICKEL (II) ION, PEPTIDE DEFORMYLASE
Authors:Meinnel, T, Dardel, F.
Deposit date:1997-12-15
Release date:1998-03-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of nickel-peptide deformylase.
J.Mol.Biol., 280, 1998
1IUO
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BU of 1iuo by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with acetates
Descriptor: ACETATE ION, meta-Cleavage product hydrolase
Authors:Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1V4B
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BU of 1v4b by Molmil
The crystal structure of AzoR (Azo Reductase) from Escherichia coli: Oxidized form
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, ISOPROPYL ALCOHOL, ...
Authors:Ito, K, Tanokura, M.
Deposit date:2003-11-12
Release date:2005-01-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of AzoR from Escherichia coli. An oxidereductase conserved in microorganisms
J.Biol.Chem., 281, 2006
2L4V
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BU of 2l4v by Molmil
Three Dimensional Structure of Pineapple Cystatin
Descriptor: Cystatin
Authors:Chyan, C.C.L, Deli, I.I, Chen, B.B.J.
Deposit date:2010-10-15
Release date:2011-10-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Resonance assignments and secondary structure of a phytocystatin from Ananas comosus
Biomol.Nmr Assign., 6, 2012
8CLF
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BU of 8clf by Molmil
Z-SolQ2Br bound to tubulin (T2R-TTL) complex
Descriptor: 5-[[4-(2-bromoethyl)-3,5-dimethoxy-phenyl]diazenyl]-2-methoxy-phenol, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Wranik, M, Bertrand, Q, Kepa, M, Weinert, T, Steinmetz, M, Standfuss, J.
Deposit date:2023-02-16
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A multi-reservoir extruder for time-resolved serial protein crystallography and compound screening at X-ray free-electron lasers.
Nat Commun, 14, 2023
7O2G
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BU of 7o2g by Molmil
Unspecific peroxygenase from Hypoxylon sp. EC38 in complex with styrene
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Rotilio, L, Mattevi, A.
Deposit date:2021-03-30
Release date:2021-09-15
Last modified:2021-09-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical studies enlighten the unspecific peroxygenase from Hypoxylon sp. EC38 as an efficient oxidative biocatalyst.
Acs Catalysis, 11, 2021
3F15
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BU of 3f15 by Molmil
Crystal structure of the catalytic domain of human mmp12 complexed with the inhibitor (S)-N-(2,3-dihydroxypropyl)-4-methoxy-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Descriptor: 2-[[(2S)-2,3-dihydroxypropyl]-(4-methoxyphenyl)sulfonyl-amino]-N-oxo-ethanamide, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Calderone, V.
Deposit date:2008-10-27
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
4QR3
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BU of 4qr3 by Molmil
Brd4 Bromodomain 1 complex with its novel inhibitors
Descriptor: Bromodomain-containing protein 4, N-cyclopentyl-3-(2-oxo-2,3-dihydro-1,3-thiazol-4-yl)benzenesulfonamide
Authors:Xiong, B, Cao, D.Y, Chen, T.T, Xu, Y.C.
Deposit date:2014-06-30
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.374 Å)
Cite:Fragment-based drug discovery of 2-thiazolidinones as BRD4 inhibitors: 2. Structure-based optimization
J.Med.Chem., 58, 2015

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