Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YMX
DownloadVisualize
BU of 5ymx by Molmil
Myxococcus xanthus MglA in GDP bound conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Baranwal, J, Gayathri, P.
Deposit date:2017-10-22
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Allosteric regulation of a prokaryotic small Ras-like GTPase contributes to cell polarity oscillations in bacterial motility.
Plos Biol., 17, 2019
6Z7W
DownloadVisualize
BU of 6z7w by Molmil
Human insulin in complex with the analytical antibody HUI-018 Fab
Descriptor: HUI-018 Fab Heavy Chain, Insulin, MAb 6H10 light chain
Authors:Johansson, E.
Deposit date:2020-06-02
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Insulin binding to the analytical antibody sandwich pair OXI-005 and HUI-018: Epitope mapping and binding properties.
Protein Sci., 30, 2021
6Z84
DownloadVisualize
BU of 6z84 by Molmil
CK2 alpha bound to chemical probe SGC-CK2-1 derivative
Descriptor: Casein kinase II subunit alpha, SULFATE ION, ~{N}-[1-[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]indol-6-yl]ethanamide
Authors:Kraemer, A, Wells, C, Drewry, D.H, Pickett, J.E, Axtman, A.D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-06-02
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Development of a potent and selective chemical probe for the pleiotropic kinase CK2.
Cell Chem Biol, 28, 2021
5YOK
DownloadVisualize
BU of 5yok by Molmil
Structure of HIV-1 Protease in Complex with Inhibitor KNI-1657
Descriptor: (4R)-N-[(2,6-dimethylphenyl)methyl]-3-[(2S,3S)-3-[[(2S)-2-[(7-methoxy-1-benzofuran-2-yl)carbonylamino]-2-[(3R)-oxolan-3 -yl]ethanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide, GLYCEROL, HIV-1 PROTEASE
Authors:Adachi, M, Hidaka, K, Kuroki, R, Kiso, Y.
Deposit date:2017-10-29
Release date:2018-07-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Identification of Highly Potent Human Immunodeficiency Virus Type-1 Protease Inhibitors against Lopinavir and Darunavir Resistant Viruses from Allophenylnorstatine-Based Peptidomimetics with P2 Tetrahydrofuranylglycine.
J. Med. Chem., 61, 2018
8EZ8
DownloadVisualize
BU of 8ez8 by Molmil
Structure of 3C08 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of influenza virus neuraminidase antibody 3C08, Light chain of influenza virus neuraminidase antibody 3C08, ...
Authors:Mou, Z, Lei, R, Wu, N.C, Dai, X.
Deposit date:2022-10-31
Release date:2023-11-08
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Immunity, 56, 2023
8EZ7
DownloadVisualize
BU of 8ez7 by Molmil
Structure of 1F04 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of influenza virus neuraminidase antibody 1F04, Light chain of influenza virus neuraminidase antibody 1F04, ...
Authors:Mou, Z, Lei, R, Wu, N.C, Dai, X.
Deposit date:2022-10-31
Release date:2023-11-08
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Immunity, 56, 2023
8EZ3
DownloadVisualize
BU of 8ez3 by Molmil
Structure of 3A10 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of influenza virus neuraminidase antibody 3A10, Light chain of influenza virus neuraminidase antibody 3A10, ...
Authors:Mou, Z, Lei, R, Wu, N.C, Dai, X.
Deposit date:2022-10-31
Release date:2023-11-08
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Leveraging vaccination-induced protective antibodies to define conserved epitopes on influenza N2 neuraminidase.
Immunity, 56, 2023
8P4U
DownloadVisualize
BU of 8p4u by Molmil
Alpha-1-antitrypsin - Sydney variant (G192C)
Descriptor: Alpha-1-antitrypsin
Authors:Kamuda, K, Lomas, D.A, Irving, J.A.
Deposit date:2023-05-23
Release date:2024-04-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel pathological mutant reveals the role of torsional flexibility in the serpin breach in adoption of an aggregation-prone intermediate.
Febs J., 291, 2024
6YUL
DownloadVisualize
BU of 6yul by Molmil
CK2 alpha bound to Macrocycle
Descriptor: 7,10-Dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene-5-carboxylic acid, Casein kinase II subunit alpha, SULFATE ION
Authors:Kraemer, A, Hanke, T, Kurz, C, Celik, I, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-04-27
Release date:2020-07-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Optimization of pyrazolo[1,5-a]pyrimidines lead to the identification of a highly selective casein kinase 2 inhibitor.
Eur.J.Med.Chem., 208, 2020
8XFY
DownloadVisualize
BU of 8xfy by Molmil
The Crystal Structure of RSK2 from Biortus.
Descriptor: 2,6-bis(fluoranyl)-4-[4-(4-morpholin-4-ylphenyl)pyridin-3-yl]phenol, Ribosomal protein S6 kinase alpha-3
Authors:Wang, F, Cheng, W, Lv, Z, Lin, D, Pan, W.
Deposit date:2023-12-14
Release date:2024-03-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structure of RSK2 from Biortus.
To Be Published
8F5X
DownloadVisualize
BU of 8f5x by Molmil
Crystal structure of human eosinophil-derived neurotoxin (EDN, ribonuclease 2) in complex with 5'-adenosine monophosphate (AMP)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Non-secretory ribonuclease, ...
Authors:Tran, T.T.Q, Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2022-11-15
Release date:2023-11-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ancestral sequence reconstruction dissects structural and functional differences among eosinophil ribonucleases.
J.Biol.Chem., 300, 2024
8ESS
DownloadVisualize
BU of 8ess by Molmil
Myoglobin variant Mb-cIII complex
Descriptor: Myoglobin, SULFATE ION, [2,18-bis(2-carboxyethyl)-7,12-diethenyl-3,8,13,17-tetramethyl-21-(2-oxo-3-phenylpropyl)porphyrin-21-iumato(2-)-kappa~3~N~22~,N~23~,N~24~]iron(2+)
Authors:Bacik, J.P, Fasan, R, Ando, N.
Deposit date:2022-10-14
Release date:2023-12-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanistic manifold in a hemoprotein-catalyzed cyclopropanation reaction with diazoketone.
Nat Commun, 14, 2023
8ESU
DownloadVisualize
BU of 8esu by Molmil
Myoglobin variant Mb-imi complex
Descriptor: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Bacik, J.P, Fasan, R, Ando, N.
Deposit date:2022-10-14
Release date:2023-12-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Mechanistic manifold in a hemoprotein-catalyzed cyclopropanation reaction with diazoketone.
Nat Commun, 14, 2023
5YRY
DownloadVisualize
BU of 5yry by Molmil
Crystal structure of C-terminal redox domain of APR1 from Arabidopsis thaliana
Descriptor: 5'-adenylylsulfate reductase 1, chloroplastic
Authors:Hsu, C.H.
Deposit date:2017-11-11
Release date:2018-11-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.698 Å)
Cite:C-terminal Redox Domain ofArabidopsisAPR1 is a Non-Canonical Thioredoxin Domain with Glutaredoxin Function.
Antioxidants (Basel), 8, 2019
6JS8
DownloadVisualize
BU of 6js8 by Molmil
Structure of the CYP102A1 Haem Domain with N-Dehydroabietoyl-L-Tryptophan
Descriptor: (2S)-2-[[(1R,4aS,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,9,10,10a-hexahydrophenanthren-1-yl]carbonylamino]-3-(1H-indol-3-yl)propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ...
Authors:Stanfield, J.K, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
Deposit date:2019-04-07
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystals in Minutes: Instant On-Site Microcrystallisation of Various Flavours of the CYP102A1 (P450BM3) Haem Domain.
Angew.Chem.Int.Ed.Engl., 59, 2020
6Z4K
DownloadVisualize
BU of 6z4k by Molmil
A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 6 in P21 space group
Descriptor: CHLORIDE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ...
Authors:Amporndanai, K, Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
5YHN
DownloadVisualize
BU of 5yhn by Molmil
Solution structure of the LEKTI Domain 4
Descriptor: cDNA FLJ60407, highly similar to Serine protease inhibitor Kazal-type 5
Authors:Mok, Y.K, Ramesh, K.
Deposit date:2017-09-29
Release date:2018-08-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Homologous Lympho-Epithelial Kazal-type Inhibitor Domains Delay Blood Coagulation by Inhibiting Factor X and XI with Differential Specificity.
Structure, 26, 2018
5YAM
DownloadVisualize
BU of 5yam by Molmil
Solution structure of mice Met-CCL5/RANTES
Descriptor: C-C motif chemokine 5
Authors:Chen, Y.-C, Chen, S.-P, Lee, Y.-Z, Sue, S.-C.
Deposit date:2017-09-01
Release date:2018-09-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Integrative Model to Coordinate the Oligomerization and Aggregation Mechanisms of CCL5.
J.Mol.Biol., 432, 2020
6Z7Y
DownloadVisualize
BU of 6z7y by Molmil
Human insulin in complex with the analytical antibody OXI-005 Fab
Descriptor: Insulin, OXI-005 Fab Heavy chain, OXI-005 Fab Light chain
Authors:Johansson, E.
Deposit date:2020-06-02
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insulin binding to the analytical antibody sandwich pair OXI-005 and HUI-018: Epitope mapping and binding properties.
Protein Sci., 30, 2021
6NG0
DownloadVisualize
BU of 6ng0 by Molmil
Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with sunitinib in the inactive state.
Descriptor: Mitogen-activated protein kinase kinase kinase kinase 1, N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide
Authors:Johnson, E, McTigue, M, Cronin, C.N.
Deposit date:2018-12-21
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Multiple conformational states of the HPK1 kinase domain in complex with sunitinib reveal the structural changes accompanying HPK1 trans-regulation.
J.Biol.Chem., 294, 2019
6NSX
DownloadVisualize
BU of 6nsx by Molmil
Yeast Hsh155 Ligand bound to Human Tat-SF1 Motif
Descriptor: CHLORIDE ION, HIV Tat-specific factor 1, Hsh155
Authors:Jenkins, J.L, Leach, J.R, Kielkopf, C.L.
Deposit date:2019-01-25
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cus2 enforces the first ATP-dependent step of splicing by binding to yeast SF3b1 through a UHM-ULM interaction.
Rna, 25, 2019
8XN7
DownloadVisualize
BU of 8xn7 by Molmil
Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with compound 9f
Descriptor: 5-amino-2-((6-methoxy-2-methyl-1,2,3,4-tetrahydroisoquinolin-7-yl)amino)-8-(2-(trifluoromethyl)benzyl)pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase kinase kinase kinase 1
Authors:Huang, W.X, Liu, R, Ding, K.
Deposit date:2023-12-29
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of 5-aminopyrido[2,3-d]pyrimidin-7(8H)-one derivatives as new hematopoietic progenitor kinase 1 (HPK1) inhibitors.
Eur.J.Med.Chem., 269, 2024
5YOZ
DownloadVisualize
BU of 5yoz by Molmil
Solution structure of truncated Rab5a from Leishmania donovani
Descriptor: Rab5a
Authors:Maheshwari, D, Yadav, R, Mukhopadhyay, A, Arora, A.
Deposit date:2017-10-31
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Biophysical Characterization of Rab5a from Leishmania Donovani
Biophys. J., 115, 2018
5YUL
DownloadVisualize
BU of 5yul by Molmil
Native Structure of hSOD1 in P6322 space group
Descriptor: Dihydrogen tetrasulfide, GLYCEROL, Superoxide dismutase [Cu-Zn], ...
Authors:Manjula, R, Padmanabhan, B.
Deposit date:2017-11-22
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Assessment of ligand binding at a site relevant to SOD1 oxidation and aggregation
FEBS Lett., 592, 2018
5YV5
DownloadVisualize
BU of 5yv5 by Molmil
Crystal structure of the complex of archaeal ribosomal stalk protein aP1 and archaeal ribosome recycling factor aABCE1.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase RIL, Archaeal ribosomal stalk protein aP1, ...
Authors:Imai, H, Abe, T, Miyoshi, T, Nishikawa, S, Ito, K, Uchiumi, T.
Deposit date:2017-11-24
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The ribosomal stalk protein is crucial for the action of the conserved ATPase ABCE1
Nucleic Acids Res., 46, 2018

225946

건을2024-10-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon