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2DPD
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Crystal structure of the Replication Termination Protein in complex with a pseudosymmetric B-site
Descriptor: 5'-D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*AP*AP*TP*GP*TP*TP*CP*AP*TP*AP*G)-3', 5'-D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*TP*AP*TP*GP*TP*TP*CP*AP*TP*AP*G)-3', Replication termination protein
Authors:Vivian, J.P, Wilce, J, Wilce, M.C.J.
Deposit date:2006-05-09
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Crystal structure of the Replication Termination Protein in complex with a pseudosymmetric B-site
to be published
2DPE
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Crystal structure of a secretory 40KDA glycoprotein from sheep at 2.0A resolution
Descriptor: Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Srivastava, D.B, Ethayathulla, A.S, Kumar, J, Singh, N, Sharma, S, Das, U, Srinivasan, A, Singh, T.P.
Deposit date:2006-05-11
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of a secretory signalling glycoprotein from sheep at 2.0A resolution
J.Struct.Biol., 156, 2006
2DPF
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Crystal Structure of curculin1 homodimer
Descriptor: Curculin, SULFATE ION
Authors:Kurimoto, E, Suzuki, M, Amemiya, E, Yamaguchi, Y, Nirasawa, S, Shimba, N, Xu, N, Kashiwagi, T, Kawai, M, Suzuki, E, Kato, K.
Deposit date:2006-05-11
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Curculin Exhibits Sweet-tasting and Taste-modifying Activities through Its Distinct Molecular Surfaces.
J.Biol.Chem., 282, 2007
2DPG
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COMPLEX OF INACTIVE MUTANT (H240->N) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES WITH NADP+
Descriptor: GLUCOSE 6-PHOSPHATE DEHYDROGENASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Adams, M.J, Naylor, C.E, Paludin, S, Gover, S.
Deposit date:1998-04-17
Release date:1998-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:On the mechanism of the reaction catalyzed by glucose 6-phosphate dehydrogenase.
Biochemistry, 37, 1998
2DPH
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Crystal Structure of Formaldehyde dismutase
Descriptor: Formaldehyde dismutase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Hasegawa, T, Yamano, A, Yanase, H.
Deposit date:2006-05-11
Release date:2007-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The X-ray crystal structure of formaldehyde dismutase at 2.3 A resolution
Acta Crystallogr.,Sect.A, 58, 2002
2DPI
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Ternary complex of hPoli with DNA and dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(*TP*(EDA)P*GP*GP*GP*TP*CP*CP*T)-3', ...
Authors:Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2006-05-12
Release date:2006-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Hoogsteen base pair formation promotes synthesis opposite the 1,N(6)-ethenodeoxyadenosine lesion by human DNA polymerase iota.
Nat.Struct.Mol.Biol., 13, 2006
2DPJ
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structure of hPoli with DNA and dTTP
Descriptor: 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(*TP*(EDA)P*GP*GP*GP*TP*CP*CP*T)-3', DNA polymerase iota, ...
Authors:Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2006-05-12
Release date:2006-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Hoogsteen base pair formation promotes synthesis opposite the 1,N(6)-ethenodeoxyadenosine lesion by human DNA polymerase iota.
Nat.Struct.Mol.Biol., 13, 2006
2DPK
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The Crystal Structure of the Primary Ca2+ Sensor of the Na+/Ca2+ Exchanger
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, GUANIDINE, ...
Authors:Abramson, J, Sawaya, M.
Deposit date:2006-05-12
Release date:2006-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the primary Ca2+ sensor of the na+/ca2+ exchanger reveals a novel Ca2+ binding motif.
J.Biol.Chem., 281, 2006
2DPL
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Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit B
Authors:Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-12
Release date:2006-11-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3
To be Published
2DPM
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DPNM DNA ADENINE METHYLTRANSFERASE FROM STREPTOCCOCUS PNEUMONIAE COMPLEXED WITH S-ADENOSYLMETHIONINE
Descriptor: MERCURY (II) ION, PROTEIN (ADENINE-SPECIFIC METHYLTRANSFERASE DPNII 1), S-ADENOSYLMETHIONINE
Authors:Tran, P.H, Korszun, Z.R, Cerritelli, S, Springhorn, S.S, Lacks, S.A.
Deposit date:1998-09-03
Release date:1998-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the DpnM DNA adenine methyltransferase from the DpnII restriction system of streptococcus pneumoniae bound to S-adenosylmethionine.
Structure, 6, 1998
2DPN
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Crystal Structure of the glycerol kinase from Thermus thermophilus HB8
Descriptor: Glycerol kinase
Authors:Asada, Y, Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-12
Release date:2006-11-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Nucleant-mediated protein crystallization with the application of microporous synthetic zeolites.
Acta Crystallogr.,Sect.D, 64, 2008
2DPP
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Crystal structure of thermostable Bacillus sp. RAPc8 nitrile hydratase
Descriptor: COBALT (II) ION, Nitrile hydratase alpha subunit, Nitrile hydratase beta subunit
Authors:Tsekoa, T.L, Tastan-Bishop, A.O, Cameron, R.A, Sewell, B.T, Sayed, M.F, Cowan, D.A.
Deposit date:2006-05-12
Release date:2007-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of thermostable Bacillus sp. RAPc8 nitrile hydratse
To be Published
2DPQ
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The crystal structures of the calcium-bound con-G and con-T(K7gamma) dimeric peptides demonstrate a novel metal-dependent helix-forming motif
Descriptor: CALCIUM ION, CHLORIDE ION, Conantokin-G
Authors:Cnudde, S.E, Prorok, M, Dai, Q, Castellino, F.J, Geiger, J.H.
Deposit date:2006-05-13
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif
J.Am.Chem.Soc., 129, 2007
2DPR
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The crystal structures of the calcium-bound con-G and con-T(K7Glu) dimeric peptides demonstrate a novel metal-dependent helix-forming motif
Descriptor: CALCIUM ION, Conantokin-T
Authors:Cnudde, S.E, Prorok, M, Dai, Q, Castellino, F.J, Geiger, J.H.
Deposit date:2006-05-13
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif
J.Am.Chem.Soc., 129, 2007
2DPS
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BU of 2dps by Molmil
Structure of Leucyl/phenylalanyl-tRNA-protein transferase
Descriptor: Leucyl/phenylalanyl-tRNA--protein transferase
Authors:Suto, K, Shimizu, Y, Tomita, K.
Deposit date:2006-05-14
Release date:2007-01-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog
Embo J., 25, 2006
2DPT
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BU of 2dpt by Molmil
Leucyl/phenylalanyl-tRNA-protein transferase complexed with puromycin
Descriptor: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA--protein transferase, PUROMYCIN
Authors:Suto, K, Shimizu, Y, Tomita, K.
Deposit date:2006-05-14
Release date:2007-01-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures of leucyl/phenylalanyl-tRNA-protein transferase and its complex with an aminoacyl-tRNA analog
Embo J., 25, 2006
2DPU
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Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA
Descriptor: 5'-D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*T)-3', 5'-D(P*AP*TP*GP*TP*TP*CP*AP*TP*AP*G)-3', Replication termination protein
Authors:Vivian, J.P, Wilce, J, Wilce, M.C.J.
Deposit date:2006-05-15
Release date:2007-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA
to be published
2DPW
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BU of 2dpw by Molmil
Hpothetical Transferase Structure from Thermus thermophilus
Descriptor: Hypothetical protein TTHA0179, SODIUM ION
Authors:Rehse, P.H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-17
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hypothetical Transferase from Thermus thermophilus
To be Published
2DPX
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BU of 2dpx by Molmil
Crystal Structure of human Rad GTPase
Descriptor: GTP-binding protein RAD, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Yanuar, A, Sakurai, S, Kitano, K, Hakoshima, T.
Deposit date:2006-05-18
Release date:2006-08-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human Rad GTPase of the RGK-family
Genes Cells, 11, 2006
2DPY
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BU of 2dpy by Molmil
Crystal structure of the flagellar type III ATPase FliI
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellum-specific ATP synthase
Authors:Imada, K, Namba, K, Minamino, T.
Deposit date:2006-05-18
Release date:2006-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural similarity between the flagellar type III ATPase FliI and F1-ATPase subunits
Proc.Natl.Acad.Sci.Usa, 104, 2007
2DPZ
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BU of 2dpz by Molmil
Structure of the complex of phospholipase A2 with N-(4-hydroxyphenyl)- acetamide at 2.1 A resolution
Descriptor: N-(4-HYDROXYPHENYL)ACETAMIDE (TYLENOL), Phospholipase A2 VRV-PL-VIIIa, SULFATE ION
Authors:Singh, N, Sharma, S, Singh, T.P.
Deposit date:2006-05-18
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phospholipase A2 as a target protein for non-steroidal anti-inflammatory drugs (NSAIDs): Crystal structure of the complex formed between a group II phospholipase A2 and N-(4-hydroxyphenyl) - acetamide at 2.1 resolution
To be Published
2DQ0
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BU of 2dq0 by Molmil
Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii complexed with a seryl-adenylate analog
Descriptor: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, SULFATE ION, Seryl-tRNA synthetase
Authors:Itoh, Y, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-18
Release date:2007-06-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii.
Rna Biol., 5, 2008
2DQ3
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Crystal structure of aq_298
Descriptor: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, Seryl-tRNA synthetase
Authors:Itoh, Y, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-18
Release date:2007-06-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of aq_298
To be Published
2DQ4
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Crystal structure of threonine 3-dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-threonine 3-dehydrogenase, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-19
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
2DQ5
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solution structure of the Mid1 B Box2 Chc(D/C)C2H2 Zinc-Binding Domain: insights into an evolutionary conserved ring fold
Descriptor: Midline-1, ZINC ION
Authors:Massiah, M.A, Matts, J.A.B, Short, K.M, Simmons, B.N, Singireddy, S, Zou, J, Cox, T.C.
Deposit date:2006-05-20
Release date:2007-04-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the MID1 B-box2 CHC(D/C)C(2)H(2) Zinc-binding Domain: Insights into an Evolutionarily Conserved RING Fold
J.Mol.Biol., 369, 2007

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