2DPM

DPNM DNA ADENINE METHYLTRANSFERASE FROM STREPTOCCOCUS PNEUMONIAE COMPLEXED WITH S-ADENOSYLMETHIONINE

Summary for 2DPM

DescriptorPROTEIN (ADENINE-SPECIFIC METHYLTRANSFERASE DPNII 1), MERCURY (II) ION, S-ADENOSYLMETHIONINE, ... (4 entities in total)
Functional Keywordsdna adenine methyltransferase, methyltransferase, methylase, dna methyltransferase group alpha, s-adenosylmethionine, dna n6-adenine methylation, dpnii restriction-modification system, gatc methylation, rossmann fold, transferase
Biological sourceStreptococcus pneumoniae
Total number of polymer chains1
Total molecular weight33547.4
Authors
Tran, P.H.,Korszun, Z.R.,Cerritelli, S.,Springhorn, S.S.,Lacks, S.A. (deposition date: 1998-09-03, release date: 1998-12-23, Last modification date: 2017-10-04)
Primary citation
Tran, P.H.,Korszun, Z.R.,Cerritelli, S.,Springhorn, S.S.,Lacks, S.A.
Crystal structure of the DpnM DNA adenine methyltransferase from the DpnII restriction system of streptococcus pneumoniae bound to S-adenosylmethionine.
Structure, 6:1563-1575, 1998
PubMed: 9862809 (PDB entries with the same primary citation)
DOI: 10.1016/S0969-2126(98)00154-3
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.8 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers30.8%2.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2dpm
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Molmil generated image of 2dpm
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Molmil generated image of 2dpm
rotated about y axis by 90°
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