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7SXM
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BU of 7sxm by Molmil
Structure of Xenon-derivatized Methyl-Coenzyme M Reductase from Methanothermobacter marburgensis
Descriptor: 1-THIOETHANESULFONIC ACID, ACETATE ION, Coenzyme B, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2021-11-23
Release date:2022-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:XFEL serial crystallography reveals the room temperature structure of methyl-coenzyme M reductase.
J.Inorg.Biochem., 230, 2022
8OIK
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BU of 8oik by Molmil
D-PHAT domain (NTD) of human SAMD4A
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Protein Smaug homolog 1
Authors:Kubikova, J, Jeske, M.
Deposit date:2023-03-23
Release date:2023-04-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural basis for binding of Drosophila Smaug to the GPCR Smoothened and to the germline inducer Oskar.
Proc.Natl.Acad.Sci.USA, 120, 2023
7YRQ
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BU of 7yrq by Molmil
Cryo-EM structure of human Peroxisomal ABC Transporter ABCD1
Descriptor: ATP-binding cassette sub-family D member 1, [(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate
Authors:Chao, X, Li-Na, J, Lin, T.
Deposit date:2022-08-10
Release date:2023-03-22
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into substrate recognition and translocation of human peroxisomal ABC transporter ALDP.
Signal Transduct Target Ther, 8, 2023
6DOM
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BU of 6dom by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 50 mM K+ for 120 s at 21 C
Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of cleaved RNA (5'-R(*AP*CP*AP*UP*CP*G)-3'), ...
Authors:Samara, N.L, Yang, W.
Deposit date:2018-06-09
Release date:2018-08-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.425 Å)
Cite:Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018
5HZN
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BU of 5hzn by Molmil
Structure of NVP-AEW541 in complex with IGF-1R kinase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7-[cis-3-(azetidin-1-ylmethyl)cyclobutyl]-5-[3-(benzyloxy)phenyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Insulin-like growth factor 1 receptor, ...
Authors:Cowan-Jacob, S.W.
Deposit date:2016-02-02
Release date:2016-04-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of a 5-[3-phenyl-(2-cyclic-ether)-methylether]-4-aminopyrrolo[2,3-d]pyrimidine series of IGF-1R inhibitors.
Bioorg.Med.Chem.Lett., 26, 2016
6DPO
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BU of 6dpo by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 360 s at 21 C
Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of cleaved RNA (5'-R(*AP*CP*AP*UP*CP*G)-3'), ...
Authors:Samara, N.L, Yang, W.
Deposit date:2018-06-09
Release date:2018-08-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018
8TWY
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BU of 8twy by Molmil
Structure of p110 alpha bound to (S)-1-(4-((2-(4-(4-(2-amino-4-(difluoromethyl)pyrimidin-5-yl)-6-(3-methylmorpholino)-1,3,5- triazin-2-yl)piperazin-1-yl)-2-oxoethoxy)methyl)piperidin-1-yl)prop-2-en-1-one (compound 9)
Descriptor: 1-(4-{[2-(4-{(4P)-4-[2-amino-4-(difluoromethyl)pyrimidin-5-yl]-6-[(3S)-3-methylmorpholin-4-yl]-1,3,5-triazin-2-yl}piperazin-1-yl)-2-oxoethoxy]methyl}piperidin-1-yl)prop-2-en-1-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Burke, J.E, Barlow-Busch, I.
Deposit date:2023-08-21
Release date:2024-08-28
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Rapid, potent, and persistent covalent chemical probes to deconvolute PI3K alpha signaling.
Chem Sci, 15, 2024
9LSM
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BU of 9lsm by Molmil
The crystal structure of PDE5A with L9
Descriptor: 1-[(13~{S},15~{R})-4-bromanyl-15-(3-chloranyl-4-methoxy-phenyl)-8,12,16-triazatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadeca-1(17),2,4,6,8-pentaen-12-yl]ethanone, MAGNESIUM ION, SULFATE ION, ...
Authors:Wu, D, Huang, Y.-Y, Luo, H.-B.
Deposit date:2025-02-04
Release date:2025-06-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Plasma metabolites-based drug design: Discovery of novel and highly selective phosphodiesterase 5 inhibitors
Chin.Chem.Lett., 2025
8U0H
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BU of 8u0h by Molmil
Crystal structure of PTPN2 with a PROTAC
Descriptor: (5P)-3-(carboxymethoxy)-4-chloro-5-(3-{[(4S)-1-({3-[2-(4-{3-[(3R)-2,6-dioxopiperidin-3-yl]-2-oxo-2,3-dihydro-1,3-benzoxazol-6-yl}piperidin-1-yl)acetamido]phenyl}methanesulfonyl)-2,2-dimethylpiperidin-4-yl]amino}phenyl)thiophene-2-carboxylic acid, ACETATE ION, PTPN2, ...
Authors:Jain, R, Longenecker, K, Qiu, W.
Deposit date:2023-08-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mechanistic insights into a heterobifunctional degrader-induced PTPN2/N1 complex.
Commun Chem, 7, 2024
5HBF
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BU of 5hbf by Molmil
Crystal structure of human full-length chitotriosidase (CHIT1)
Descriptor: Chitotriosidase-1, GLYCEROL
Authors:Fadel, F, Zhao, Y, Cousido-Siah, A, Ruiz, F.X, Mitschler, A, Podjarny, A.
Deposit date:2015-12-31
Release date:2016-05-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:X-Ray Crystal Structure of the Full Length Human Chitotriosidase (CHIT1) Reveals Features of Its Chitin Binding Domain.
Plos One, 11, 2016
9N7R
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BU of 9n7r by Molmil
Crystal structure of HPK1 bound to N-(3,5-difluoro-4-{[3-(trifluoromethyl)-1H-pyrrolo[2,3-b]pyridin-4-yl]oxy}phenyl)-N'-[3-(morpholin-4-yl)propyl]urea (compound C6)
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Walters, B.T, Kiefer, J.R, Hsu, P.L, Wang, W, Wu, P.
Deposit date:2025-02-06
Release date:2025-06-25
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Integrating Hydrogen Exchange with Molecular Dynamics for Improved Ligand Binding Predictions.
J.Chem.Inf.Model., 65, 2025
9NC2
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BU of 9nc2 by Molmil
Structure of HPK1 with compound C3
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase kinase kinase kinase 1, ...
Authors:Kiefer, J.R, Walters, B.T, Wang, W, Wu, P, Duo, Y.
Deposit date:2025-02-14
Release date:2025-06-25
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Integrating Hydrogen Exchange with Molecular Dynamics for Improved Ligand Binding Predictions.
J.Chem.Inf.Model., 65, 2025
5H6X
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BU of 5h6x by Molmil
The crystal structure of RpoS fragment including a partial region 1.2 and region 2 from intracellular pathogen Legionella pneumophila
Descriptor: GLYCEROL, RNA polymerase sigma factor RpoS, SODIUM ION
Authors:Zhang, N, Chen, X, Gong, X, Ge, H.
Deposit date:2016-11-15
Release date:2017-11-22
Last modified:2025-09-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-Resolution Crystal Structure of RpoS Fragment including a Partial Region 1.2 and Region 2 from the Intracellular Pathogen Legionella pneumophila
Crystals, 8, 2018
5JN8
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BU of 5jn8 by Molmil
Crystal Structure for the complex of human carbonic anhydrase IV and acetazolamide
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, ACETATE ION, Carbonic anhydrase 4, ...
Authors:Chen, Z, Waheed, A, Di Cera, E, Sly, W.S.
Deposit date:2016-04-29
Release date:2017-05-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Intrinsic thermodynamics of high affinity inhibitor binding to recombinant human carbonic anhydrase IV.
Eur. Biophys. J., 47, 2018
9GQV
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BU of 9gqv by Molmil
Pseudomonas aeruginosa FabF C164A in complex with N-((1-((2-hydroxy-4-methylpentanamido)methyl)cyclobutyl)methyl)-1H-pyrazole-3-carboxamide
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Yadrykhins'ky, V, Brenk, R.
Deposit date:2024-09-09
Release date:2025-05-07
Method:X-RAY DIFFRACTION (1.766 Å)
Cite:Towards new antibiotics: P. aeruginosa FabF ligands discovered by crystallographic fragment screening followed by hit expansion.
Eur.J.Med.Chem., 291, 2025
5EFT
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BU of 5eft by Molmil
Structural Basis for Specific Recognition of ssDNA by SRBSDV P9-1 Octamers
Descriptor: p9-1
Authors:Li, X.Y.
Deposit date:2015-10-26
Release date:2016-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Specific Recognition of ssDNA by SRBSDV P9-1 Octamers
To Be Published
6RU2
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BU of 6ru2 by Molmil
Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-methyl-glucuronoyl methylesterase, ...
Authors:Ernst, H.A, Mosbech, C, Langkilde, A, Westh, P, Meyer, A, Agger, J.W, Larsen, S.
Deposit date:2019-05-27
Release date:2020-03-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The structural basis of fungal glucuronoyl esterase activity on natural substrates.
Nat Commun, 11, 2020
8I5N
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BU of 8i5n by Molmil
Rat Kir4.1 in complex with PIP2 and Lys05
Descriptor: ATP-sensitive inward rectifier potassium channel 10, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Zhao, C, Guo, J.
Deposit date:2023-01-26
Release date:2024-02-28
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Pharmacological inhibition of Kir4.1 evokes rapid-onset antidepressant responses.
Nat.Chem.Biol., 20, 2024
5EHA
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BU of 5eha by Molmil
Crystal structure of recombinant MtaL at 1.35 Angstrom resolution
Descriptor: Lectin-like fold protein
Authors:Lai, X.-L, Soler-Lopez, M, Wichers, H.J, Dijkstra, B.W.
Deposit date:2015-10-28
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of recombinant tyrosinase-binding protein MtaL at 1.35 angstrom resolution.
Acta Crystallogr.,Sect.F, 72, 2016
5NWX
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BU of 5nwx by Molmil
Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6
Descriptor: Nuclear receptor coactivator 1, Signal transducer and activator of transcription 6
Authors:Russo, L, Giller, K, Pfitzner, E, Griesinger, C, Becker, S.
Deposit date:2017-05-08
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6.
Sci Rep, 7, 2017
7MN9
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BU of 7mn9 by Molmil
PTP1B 1-284 F225Y-R199N
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Torgeson, K.R, Page, R, Peti, W.
Deposit date:2021-04-30
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Conserved conformational dynamics determine enzyme activity.
Sci Adv, 8, 2022
7MNA
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BU of 7mna by Molmil
PTP1B 1-284 F225Y-R199N in complex with TCS401
Descriptor: 2-(OXALYL-AMINO)-4,5,6,7-TETRAHYDRO-THIENO[2,3-C]PYRIDINE-3-CARBOXYLIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Torgeson, K.R, Page, R, Peti, W.
Deposit date:2021-04-30
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Conserved conformational dynamics determine enzyme activity.
Sci Adv, 8, 2022
5O3N
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BU of 5o3n by Molmil
Crystal structure of E. cloacae 3,4-dihydroxybenzoic acid decarboxylase (AroY) reconstituted with prFMN
Descriptor: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, 3,4-dihydroxybenzoate decarboxylase, GLYCEROL, ...
Authors:Marshall, S.A, Leys, D.
Deposit date:2017-05-24
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase.
Angew. Chem. Int. Ed. Engl., 56, 2017
8IU2
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BU of 8iu2 by Molmil
Cryo-EM structure of Long-wave-sensitive opsin 1
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Peng, Q, Cheng, X.Y, Li, J, Lu, Q.Y, Li, Y.Y, Zhang, J.
Deposit date:2023-03-23
Release date:2024-03-27
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cryo-EM structure of Long-wave-sensitive opsin 1
To Be Published
5Y0C
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BU of 5y0c by Molmil
Crystal Structure of the human nucleosome at 2.09 angstrom resolution
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
Authors:Kurumizaka, H, Arimura, Y, Fujita, R, Noda, M.
Deposit date:2017-07-16
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.087 Å)
Cite:Cancer-associated mutations of histones H2B, H3.1 and H2A.Z.1 affect the structure and stability of the nucleosome.
Nucleic Acids Res., 46, 2018

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