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8HRM
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BU of 8hrm by Molmil
Cryo-EM structure of streptavidin
分子名称: Streptavidin
著者Xu, J, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4OKA
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BU of 4oka by Molmil
Structural-, Kinetic- and Docking Studies of Artificial Imine Reductases Based on the Biotin-Streptavidin Technology: An Induced Lock-and-Key Hypothesis
分子名称: IRIDIUM ION, Streptavidin, [N-(4-{[2-(amino-kappaN)ethyl]sulfamoyl-kappaN}phenyl)-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamidato]iridium(III)
著者Schirmer, T, Heinisch, T.
登録日2014-01-22
公開日2014-11-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.505 Å)
主引用文献Structural, Kinetic, and Docking Studies of Artificial Imine Reductases Based on Biotin-Streptavidin Technology: An Induced Lock-and-Key Hypothesis
J.Am.Chem.Soc., 136, 2014
2GH7
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BU of 2gh7 by Molmil
Epi-biotin complex with core streptavidin
分子名称: BIOTIN, EPI-BIOTIN, GLYCEROL, ...
著者Le Trong, I, Aubert, D.G.L, Thomas, N.R, Stenkamp, R.E.
登録日2006-03-26
公開日2006-04-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The high-resolution structure of (+)-epi-biotin bound to streptavidin.
Acta Crystallogr.,Sect.D, 62, 2006
4U46
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BU of 4u46 by Molmil
Crystal structure of an avidin mutant
分子名称: Avidin, CHLORIDE ION
著者Agrawal, N, Lehtonen, S, Kahkonen, N, Riihimaki, T, Hytonen, V.P, Kulomaa, M.S, Johnson, M.S, Airenne, T.T.
登録日2014-07-23
公開日2015-08-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Artificial Avidin-Based Receptors for a Panel of Small Molecules.
Acs Chem.Biol., 11, 2016
7NLV
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BU of 7nlv by Molmil
WILDTYPE CORE-STREPTAVIDIN WITH a conjugated BIOTINYLATED PYRROLIDINE II
分子名称: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, Streptavidin
著者Nodling, A.R, Santi, N, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2021-02-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
8QQ3
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Streptavidin with a Ni-cofactor
分子名称: 4-[4-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butylamino]-~{N}1,~{N}1'-di(quinolin-8-yl)cyclohexane-1,1-dicarboxamide, NICKEL (II) ION, Streptavidin
著者Zhang, K, Jakob, R.P, Ward, T.R.
登録日2023-10-03
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An artificial nickel chlorinase based on the biotin-streptavidin technology.
Chem.Commun.(Camb.), 60, 2024
1HQQ
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BU of 1hqq by Molmil
MINIPROTEIN MP-2 (M9A) COMPLEX WITH STREPTAVIDIN
分子名称: MP-2, STREPTAVIDIN
著者Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
登録日2000-12-19
公開日2003-09-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-protein Complexes
To be Published
6LNG
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BU of 6lng by Molmil
Rapid crystallization of streptavidin using charged peptides
分子名称: GLYCEROL, Streptavidin
著者Minamihata, K, Tsukamoto, K, Adachi, M, Shimizu, R, Mishina, M, Kuroki, R, Nagamune, T.
登録日2019-12-30
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8000015 Å)
主引用文献Genetically fused charged peptides induce rapid crystallization of proteins.
Chem.Commun.(Camb.), 56, 2020
8BY1
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BU of 8by1 by Molmil
streptavidin with an iridium catalyst for CH activation
分子名称: SULFATE ION, Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-12-11
公開日2023-12-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.486 Å)
主引用文献streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
8BY0
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streptavidin mutant S112I K121R with an iridium catalyst for CH activation
分子名称: SULFATE ION, Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-12-11
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
6M9B
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BU of 6m9b by Molmil
Wild-type streptavidin in complex with biotin solved by native SAD with data collected at 6 keV
分子名称: BIOTIN, Streptavidin
著者Finke, A.D.
登録日2018-08-23
公開日2019-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.548 Å)
主引用文献Making routine native SAD a reality: lessons from beamline X06DA at the Swiss Light Source.
Acta Crystallogr D Struct Biol, 75, 2019
3MG5
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BU of 3mg5 by Molmil
Core-streptavidin mutant F130L in complex with biotin
分子名称: BIOTIN, GLYCEROL, Streptavidin
著者Le Trong, I, Baugh, L, Stayton, P.S, Lybrand, T.P, Stenkamp, R.E.
登録日2010-04-05
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A distal point mutation in the streptavidin-biotin complex preserves structure but diminishes binding affinity: experimental evidence of electronic polarization effects?
Biochemistry, 49, 2010
8GVK
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BU of 8gvk by Molmil
Cryo-EM structure of streptavidin
分子名称: Streptavidin
著者Liu, N, Zheng, L.M, Peng, H.L, Wang, H.W.
登録日2022-09-15
公開日2022-11-09
最終更新日2023-01-25
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Uniform thin ice on ultraflat graphene for high-resolution cryo-EM.
Nat.Methods, 20, 2023
7ALX
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BU of 7alx by Molmil
Sav-SOD: Chimeric Streptavidin-cSOD as Host for Artificial Metalloenzymes
分子名称: ((4S)-1,3-dimesityl-4-((5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)methyl)imidazolidin-2-yl)gold, Streptavidin,Superoxide dismutase [Cu-Zn],Streptavidin
著者Igareta, N.V, Christoffel, F, Peterson, R.L, Ward, T.R.
登録日2020-10-07
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design and evolution of chimeric streptavidin for protein-enabled dual gold catalysis
Nat Catal, 4, 2021
3MM0
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BU of 3mm0 by Molmil
Crystal structure of chimeric avidin
分子名称: Avidin, Avidin-related protein 4/5
著者Livnah, O, Eisenberg-Domovich, Y, Maatta, J.A.E, Kulomaa, M.S, Hytonen, V.P, Nordlund, H.R.
登録日2010-04-19
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Chimeric avidin shows stability against harsh chemical conditions-biochemical analysis and 3D structure.
Biotechnol.Bioeng., 108, 2011
7B74
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Chimeric Streptavidin With A Dimerization Domain For Artificial Transfer Hydrogenation
分子名称: Streptavidin,Superoxide dismutase [Cu-Zn],Streptavidin, {N-(4-{[2-(amino-kappaN)ethyl]sulfamoyl-kappaN}phenyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}(chloro)[(1,2,3,4,5-eta)-1,2,3,4,5-pentamethylcyclopentadienyl]iridium(III)
著者Igareta, N.V, Ward, T.R.
登録日2020-12-09
公開日2021-11-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Spiers Memorial Lecture: Shielding the active site: a streptavidin superoxide-dismutase chimera as a host protein for asymmetric transfer hydrogenation.
Faraday Disc.Chem.Soc, 2023
8GOG
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BU of 8gog by Molmil
Structure of streptavidin mutant (S112Y-K121E) complexed with biotin-cyclopentadienyl-rhodium (III)(Cp*-Rh(III))
分子名称: CHLORIDE ION, GLYCEROL, RHODIUM(III) ION, ...
著者Sairaman, A, Mukherjee, P, Maiti, D, Bhaumik, P.
登録日2022-08-24
公開日2024-02-28
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Enantiodivergent synthesis of isoindolones catalysed by a Rh(III)-based artificial metalloenzyme
Nat Synth, 2024
1MEP
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BU of 1mep by Molmil
Crystal Structure of Streptavidin Double Mutant S45A/D128A with Biotin: Cooperative Hydrogen-Bond Interactions in the Streptavidin-Biotin System.
分子名称: BIOTIN, Streptavidin
著者Hyre, D.E, Le Trong, I, Merritt, E.A, Stenkamp, R.E, Green, N.M, Stayton, P.S.
登録日2002-08-08
公開日2003-09-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Cooperative hydrogen bond interactions in the streptavidin-biotin system
Protein Sci., 15, 2006
1N43
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Streptavidin Mutant N23A with biotin at 1.89A
分子名称: BIOTIN, Streptavidin
著者Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
登録日2002-10-30
公開日2003-09-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
1N4J
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STREPTAVIDIN MUTANT N23A AT 2.18A
分子名称: Streptavidin
著者Le Trong, I, Freitag, S, Klumb, L.A, Chu, V, Stayton, P.S, Stenkamp, R.E.
登録日2002-10-31
公開日2003-09-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural studies of hydrogen bonds in the high-affinity streptavidin-biotin complex: mutations of amino acids interacting with the ureido oxygen of biotin.
Acta Crystallogr.,Sect.D, 59, 2003
5CHK
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BU of 5chk by Molmil
Crystal structure of avidin - HABA complex (hexagonal crystal form)
分子名称: 2-[2-(4-oxocyclohexa-2,5-dien-1-ylidene)hydrazinyl]benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Strzelczyk, P, Bujacz, A, Bujacz, G.
登録日2015-07-10
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure and ligand affinity of avidin in the complex with 4-hydroxyazobenzene-2-carboxylic acid
J.Mol.Struct., 1109, 2016
5CSE
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BU of 5cse by Molmil
Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand
分子名称: CHLORIDE ION, Streptavidin, chloro{di-tert-butyl[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]-lambda~5~-phosphanyl}(1-phenylprop-1-ene-1,3-diyl-kappa~2~C~1~,C~3~)palladium
著者Finke, A.D, Vera, L, Marsh, M, Chatterjee, A, Ward, T.R.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献An enantioselective artificial Suzukiase based on the biotin-streptavidin technology.
Chem Sci, 7, 2016
3EW2
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Crystal structure of rhizavidin-biotin complex
分子名称: BIOTIN, rhizavidin
著者Livnah, O, Meir, A.
登録日2008-10-14
公開日2008-12-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer.
J.Mol.Biol., 386, 2009
3EW1
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Crystal structure of rhizavidin
分子名称: rhizavidin
著者Livnah, O, Meir, A.
登録日2008-10-14
公開日2008-12-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer.
J.Mol.Biol., 386, 2009
1AVE
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CRYSTAL STRUCTURE OF HEN EGG-WHITE APO-AVIDIN IN RELATION TO ITS THERMAL STABILITY PROPERTIES
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AVIDIN
著者Pugliese, L, Coda, A, Malcovati, M, Bolognesi, M.
登録日1993-03-05
公開日1994-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of apo-avidin from hen egg-white.
J.Mol.Biol., 235, 1994

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