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4UR8
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Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid
分子名称: 2-OXOADIPIC ACID, FORMIC ACID, KETO-DEOXY-D-GALACTARATE DEHYDRATASE
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2014-06-26
公開日2014-12-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
Biochemistry, 53, 2014
4LY8
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dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
著者Conly, C.J.T.
登録日2013-07-30
公開日2015-01-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Tyrosine 110 Plays a Critical Role in Regulating the Allosteric Inhibition of Campylobacter jejuni Dihydrodipicolinate Synthase by Lysine.
Biochemistry, 53, 2014
1W3T
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BU of 1w3t by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDGal, D-Glyceraldehyde and pyruvate
分子名称: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 3-DEOXY-D-LYXO-HEXONIC ACID, D-Glyceraldehyde, ...
著者Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L.
登録日2004-07-19
公開日2004-09-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus.
J. Biol. Chem., 279, 2004
8DO5
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BU of 8do5 by Molmil
Crystal structure of NahE in complex with intermediate (R)-4-hydroxy-4-(2-hydroxyphenyl)-2-iminobutanoate
分子名称: (4R)-4-hydroxy-4-(2-hydroxyphenyl)butanoic acid, DIMETHYL SULFOXIDE, Trans-ohydrobenzylidenepyruvate hydratase aldolase
著者LeVieux, J.A, Hardtke, H.A, Zhang, Y.J.
登録日2022-07-12
公開日2022-12-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A mutagenic analysis of NahE, a hydratase-aldolase in the naphthalene degradative pathway.
Arch.Biochem.Biophys., 733, 2023
5LKY
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X-ray crystal structure of N-acetylneuraminic acid lyase in complex with pyruvate, with the phenylalanine at position 190 replaced with the non-canonical amino acid dihydroxypropylcysteine.
分子名称: DI(HYDROXYETHYL)ETHER, N-acetylneuraminate lyase
著者Windle, C.L, Trinh, C.H, Pearson, A.R, Nelson, A.S, Berry, A.
登録日2016-07-25
公開日2017-03-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Extending enzyme molecular recognition with an expanded amino acid alphabet.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3L21
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The crystal structure of a dimeric mutant of dihydrodipicolinate synthase (DAPA, RV2753C) from Mycobacterium Tuberculosis - DHDPS-A204R
分子名称: ACETATE ION, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
著者Evans, G.L, Schuldt, L, Jamerson, G.B, Devenish, S.R, Weiss, M.S, Gerrard, J.A.
登録日2009-12-14
公開日2010-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A dimeric mutant of DHDPS from Mycobacterium tuberculosis
To be Published
6P90
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Crystal structure of PaDHDPS2-H56Q mutant
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, GLYCEROL
著者Impey, R.E, Panjikar, S, Hall, C.J, Bock, L.J, Sutton, J.M, Perugini, M.A, Soares da Costa, T.P.
登録日2019-06-08
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of two dihydrodipicolinate synthase isoforms from Pseudomonas aeruginosa that differ in allosteric regulation.
Febs J., 287, 2020
8UR1
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Crystal structure N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound halide free active site)
分子名称: CHLORIDE ION, GLYCEROL, N-acetylneuraminate lyase, ...
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-10-25
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound halide free active site)
To be published
1HL2
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Crystal structure of N-acetylneuraminate lyase from E. coli mutant L142R in complex with b-hydroxypyruvate
分子名称: 3-HYDROXYPYRUVIC ACID, N-ACETYLNEURAMINATE LYASE SUBUNIT
著者Joerger, A.C, Fersht, A.R.
登録日2003-03-12
公開日2003-05-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mimicking Natural Evolution in Vitro: An N-Acetylneuraminate Lyase Mutant with an Increased Dihydrodipicolinate Synthase Activity
Proc.Natl.Acad.Sci.USA, 100, 2003
8GEK
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Dihydrodipicolinate synthase with pyruvate from Candidatus Liberibacter solanacearum
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase
著者Gilkes, J.M, Frampton, R.A, Board, A, Sheen, C.R, Smith, G.R, Dobson, R.C.J.
登録日2023-03-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Dihydrodipicolinate synthase with pyruvate from the plant pathogen, Candidatus Liberibacter solanacearum
To Be Published
6XGS
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BU of 6xgs by Molmil
Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CITRIC ACID, PHOSPHATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2020-06-18
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
to be published
6H7R
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Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-07-31
公開日2019-08-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
To Be Published
2HMC
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BU of 2hmc by Molmil
The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
分子名称: Dihydrodipicolinate synthase, MAGNESIUM ION
著者Kim, Y, Zhang, R, Xu, X, Zheng, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-07-11
公開日2006-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
To be Published, 2006
6DAN
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BU of 6dan by Molmil
PhdJ WT 2 Angstroms resolution
分子名称: CHLORIDE ION, PhdJ
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-04-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAO
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NahE WT selenomethionine
分子名称: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-05-08
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.939 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6U01
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BU of 6u01 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84D mutant with pyruvate bound in the active site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
著者Saran, S, Majdi Yazdi, M, Lehnert, L, Palmer, D.R.J, Sanders, D.A.R.
登録日2019-08-13
公開日2019-12-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase.
J.Struct.Biol., 209, 2020
1NAL
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BU of 1nal by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF N-ACETYLNEURAMINATE LYASE FROM ESCHERICHIA COLI
分子名称: N-ACETYLNEURAMINATE LYASE, SULFATE ION
著者Izard, T, Lawrence, M.C, Malby, R.L, Lilley, G.G, Colman, P.M.
登録日1994-02-28
公開日1995-09-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The three-dimensional structure of N-acetylneuraminate lyase from Escherichia coli.
Structure, 2, 1994
6TZU
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BU of 6tzu by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84A mutant with pyruvate bound in the active site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
著者Saran, S, Majdi Yazdi, M, Lehnert, C, Palmer, D.R.J, Sanders, D.A.R.
登録日2019-08-13
公開日2019-12-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase.
J.Struct.Biol., 209, 2020
4R53
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dihydrodipicolinate synthase from C. jejuni with vacant active site and vacant allosteric site
分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, ...
著者Conly, C.J.T.
登録日2014-08-20
公開日2015-10-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tyrosine 110 plays a critical role in regulating the allosteric inhibition of Campylobacter jejuni dihydrodipicolinate synthase by lysine.
Biochemistry, 53, 2014
4EOU
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BU of 4eou by Molmil
Crystal structure of E. coli dihydrodipicolinate synthase with pyruvate and succinic semi-aldehyde bound in active site
分子名称: Dihydrodipicolinate synthase, GLYCEROL, POTASSIUM ION
著者Boughton, B.A, Dobson, R.C.J, Hutton, C.A.
登録日2012-04-15
公開日2012-04-25
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of dihydrodipicolinate synthase from Escherichia coli with bound pyruvate and succinic acid semialdehyde: Unambiguous resolution of the stereochemistry of the condensation product.
Proteins, 80, 2012
3TAK
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BU of 3tak by Molmil
Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, Dihydrodipicolinate synthase, GLYCEROL, ...
著者Singh, A, Kaushik, S, Sinha, M, Tewari, R, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-08-04
公開日2011-08-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution
To be Published
3TDF
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BU of 3tdf by Molmil
Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution
分子名称: 2-KETOBUTYRIC ACID, Dihydrodipicolinate synthase
著者Kumar, M, Kaushik, S, Sinha, M, Kaur, P, Tewari, R, Sharma, S, Singh, T.P.
登録日2011-08-11
公開日2011-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution
To be Published
4XKY
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Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 A resolution
分子名称: ACETATE ION, Dihydrodipicolinate synthase, SODIUM ION
著者Mank, N.J, Arnette, A.K, Klapper, V.G, Chruszcz, M.
登録日2015-01-12
公開日2015-04-01
最終更新日2015-04-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 angstrom resolution.
Acta Crystallogr.,Sect.F, 71, 2015
6ARH
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Crystal structure of Human NAL at a resolution of 1.6 Angstrom
分子名称: ACETATE ION, N-acetylneuraminate lyase
著者Pearce, F.G, Bundela, R, Keown, J.R.
登録日2017-08-22
公開日2018-08-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of Human NAL at a resolution of 1.6 Angstrom
To Be Published
1O5K
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Crystal structure of Dihydrodipicolinate synthase (TM1521) from Thermotoga maritima at 1.80 A resolution
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CALCIUM ION
著者Joint Center for Structural Genomics (JCSG)
登録日2003-09-22
公開日2003-10-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Dihydrodipicolinate synthase (TM1521) from Thermotoga maritima at 1.80 A resolution
To be published

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