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3U8F
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Crystal structure of the complex of type I Ribosome inactivating protein in complex with Mycolic acid at 1.8 A resolution
分子名称: (2R,3R)-2-hexyl-3-hydroxytridecanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Yamini, S, Pandey, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-10-17
公開日2011-11-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the complex of type I Ribosome inactivating protein in complex with Mycolic acid at 1.8 A resolution
To be Published
8I7P
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BU of 8i7p by Molmil
Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-tyrosine
分子名称: 6-(2-ethyl-4-hydroxyphenyl)-1H-indazole-3-carboxamide, Ricin A chain, SULFATE ION
著者Goto, M, Sakamoto, N, Higashi, S, Kawata, R, Nagatsu, K, Saito, R.
登録日2023-02-01
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of ricin toxin A chain complexed with a highly potent pterin-based small-molecular inhibitor.
J Enzyme Inhib Med Chem, 38, 2023
4RZJ
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BU of 4rzj by Molmil
Structure of the complex of type 1 ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 1.98 Angstrom resolution using crystals grown in different conditions
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein
著者Pandey, S, Kushwaha, G.S, Kaur, P, Sharma, S, Singh, T.P.
登録日2014-12-22
公開日2015-01-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of the complex of type 1 ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 1.98 Angstrom resolution using crystals grown in different conditions
TO BE PUBLISHED
1F8Q
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BU of 1f8q by Molmil
CRYSTAL STRUCTURE OF ALPHA-MOMORCHARIN IN ACETONITRILE-WATER MIXTURE
分子名称: ACETONITRILE, ALPHA-MOMORCHARIN, PENTANEDIAL, ...
著者Zhu, G, Huang, Q, Qian, M, Tang, Y.
登録日2000-07-03
公開日2000-07-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of alpha-momorcharin in 80% acetonitrile--water mixture
BIOCHIM.BIOPHYS.ACTA, 1548, 2001
3BWH
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BU of 3bwh by Molmil
Atomic resolution structure of cucurmosin, a novel type 1 RIP from the sarcocarp of Cucurbita moschata
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, L.
登録日2008-01-09
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Atomic resolution structure of cucurmosin, a novel type 1 ribosome-inactivating protein from the sarcocarp of Cucurbita moschata.
J.Struct.Biol., 164, 2008
4MX1
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BU of 4mx1 by Molmil
Structure of ricin A chain bound with 2-amino-4-oxo-N-(2-(3-phenylureido)ethyl)-3,4-dihydropteridine-7-carboxamide
分子名称: 2-amino-4-oxo-N-{2-[(phenylcarbamoyl)amino]ethyl}-3,4-dihydropteridine-7-carboxamide, MALONIC ACID, Ricin A chain, ...
著者Robertus, J.D, Wiget, P.A, Manzano, L.A, Pruet, J.M, Gao, G, Saito, R, Jasheway, K.R, Monzingo, A.F, Anslyn, E.V.
登録日2013-09-25
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Sulfur incorporation generally improves Ricin inhibition in pterin-appended glycine-phenylalanine dipeptide mimics.
Bioorg.Med.Chem.Lett., 23, 2013
8CX8
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Stx2A1-BTB13086
分子名称: 1,2-ETHANEDIOL, 5-(4-chlorophenyl)furan-2-carboxylic acid, CHLORIDE ION, ...
著者Rudolph, M.J, Li, X.P.
登録日2022-05-20
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.905 Å)
主引用文献Stx2A1-BTB13086
To Be Published
8GCW
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BU of 8gcw by Molmil
Stx2A1(Y77A)-P6 peptide
分子名称: P stalk protein, rRNA N-glycosylase
著者Rudolph, M.J, Li, X.P.
登録日2023-03-03
公開日2024-03-06
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the Stx2A1(Y77A) in complex with P6 peptide.
To Be Published
6CWG
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BU of 6cwg by Molmil
Ricin catalytic subunit bound go A9 VHH antibody
分子名称: CHLORIDE ION, Ricin, VHH antibody
著者Rudolph, M.J, Mantis, N.
登録日2018-03-30
公開日2019-01-16
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Contribution of an unusual CDR2 element of a single domain antibody in ricin toxin binding affinity and neutralizing activity.
Protein Eng. Des. Sel., 31, 2018
2B7U
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BU of 2b7u by Molmil
Ribosome inactivating protein type 1 from Charybdis maritima AGG
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHARYBDIN
著者Gessmann, R, Petratos, K.
登録日2005-10-05
公開日2006-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Isolation, characterization, sequencing and crystal structure of charybdin, a type 1 ribosome-inactivating protein from Charybdis maritima agg.
Febs J., 273, 2006
5SV3
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BU of 5sv3 by Molmil
RTA1-33/44-198 (RVEC) bound to Single Domain Antibody A3C8
分子名称: Anti-Ricin A-chain Single Domain Antibody (sdAb) A3C8, Ricin, SULFATE ION
著者Compton, J.R, Legler, P.M.
登録日2016-08-04
公開日2016-10-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Stability of isolated antibody-antigen complexes as a predictive tool for selecting toxin neutralizing antibodies.
MAbs, 9, 2017
3KTZ
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BU of 3ktz by Molmil
Structure of GAP31
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome-inactivating protein gelonin
著者Kong, X.-P.
登録日2009-11-26
公開日2010-01-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A new activity of anti-HIV and anti-tumor protein GAP31: DNA adenosine glycosidase--structural and modeling insight into its functions.
Biochem.Biophys.Res.Commun., 391, 2010
1MOM
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BU of 1mom by Molmil
CRYSTAL STRUCTURE OF MOMORDIN, A TYPE I RIBOSOME INACTIVATING PROTEIN FROM THE SEEDS OF MOMORDICA CHARANTIA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MOMORDIN
著者Husain, J, Tickle, I.J, Wood, S.P.
登録日1994-03-04
公開日1994-05-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of momordin, a type I ribosome inactivating protein from the seeds of Momordica charantia.
FEBS Lett., 342, 1994
5J57
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BU of 5j57 by Molmil
V5E1-RTA complex
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin, ...
著者Rudolph, M.J.
登録日2016-04-01
公開日2016-12-07
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.
J. Biol. Chem., 292, 2017
1MRJ
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BU of 1mrj by Molmil
STUDIES ON CRYSTAL STRUCTURES ACTIVE CENTER GEOMETRY AND DEPURINE MECHANISM OF TWO RIBOSOME-INACTIVATING PROTEINS
分子名称: ADENOSINE, ALPHA-TRICHOSANTHIN
著者Huang, Q, Liu, S, Tang, Y, Jin, S, Wang, Y.
登録日1994-07-01
公開日1995-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Studies on crystal structures, active-centre geometry and depurinating mechanism of two ribosome-inactivating proteins.
Biochem.J., 309, 1995
5J56
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BU of 5j56 by Molmil
RTA-V1C7
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
著者Rudolph, M.J.
登録日2016-04-01
公開日2016-12-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.
J. Biol. Chem., 292, 2017
3KU0
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BU of 3ku0 by Molmil
Structure of GAP31 with adenine at its binding pocket
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, Ribosome-inactivating protein gelonin
著者Kong, X.-P.
登録日2009-11-26
公開日2010-01-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A new activity of anti-HIV and anti-tumor protein GAP31: DNA adenosine glycosidase--structural and modeling insight into its functions.
Biochem.Biophys.Res.Commun., 391, 2010
3V2K
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BU of 3v2k by Molmil
Crystal structure of ribosome inactivating protein from momordica balsamina complexed with the product of RNA substrate adenosine triphosphate at 2.0 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, GLYCEROL, ...
著者Kushwaha, G.S, Pandey, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-12-12
公開日2012-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states.
Biochim.Biophys.Acta, 1824, 2012
3V14
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BU of 3v14 by Molmil
Crystal structure of the complex of type I Ribosome inactivating protein complexed with Trehalose at 1.70 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
著者Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-12-09
公開日2012-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the complex of type I Ribosome inactivating protein complexed with Trehalose at 1.70 A resolution
To be Published
2QES
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BU of 2qes by Molmil
Crystal structure of the ribosome inactivating protein PDL4 from P. dioica leaves in complex with adenine
分子名称: ADENINE, Ribosome-inactivating protein PD-L4
著者Ruggiero, A, Berisio, R.
登録日2007-06-26
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
2R2X
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BU of 2r2x by Molmil
Ricin A-chain (recombinant) complex with Urea
分子名称: Ricin A chain, SULFATE ION, UREA
著者Carra, J.H, McHugh, C.A, Mulligan, S, Machiesky, L.M, Soares, A.S, Millard, C.B.
登録日2007-08-28
公開日2007-11-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site.
Bmc Struct.Biol., 7, 2007
5U4M
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BU of 5u4m by Molmil
RTA-V1C7-G29R-no_salt
分子名称: CHLORIDE ION, Ricin, V1C7 VHH antibody
著者Rudolph, M.J, Mantis, N.
登録日2016-12-05
公開日2017-12-13
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Using homology modeling to interrogate binding affinity in neutralization of ricin toxin by a family of single domain antibodies.
Proteins, 85, 2017
6URY
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BU of 6ury by Molmil
Crystal structure of ricin A chain in complex with inhibitor 9-oxo-4-fluorenecarboxamide
分子名称: 1,2-ETHANEDIOL, 9-oxo-9H-fluorene-4-carboxamide, CHLORIDE ION, ...
著者Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L.
登録日2019-10-24
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes.
Acs Infect Dis., 6, 2020
2Z53
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Crystal structure of the S211A mutant of the ribosome inactivating protein PDL4 from P. dioica leaves
分子名称: 1,2-ETHANEDIOL, Ribosome-inactivating protein PD-L4
著者Berisio, R, Ruggiero, A.
登録日2007-06-27
公開日2008-02-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
6URX
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Crystal structure of ricin A chain in complex with inhibitor 5-phenyl-2-thiophenecarboxylic acid
分子名称: 1,2-ETHANEDIOL, 5-phenylthiophene-2-carboxylic acid, DIMETHYL SULFOXIDE, ...
著者Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L.
登録日2019-10-24
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes.
Acs Infect Dis., 6, 2020

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