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4XNC
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Crystal structure at room temperature of cyclophilin D in complex with an inhibitor
分子名称: Peptidyl-prolyl cis-trans isomerase F, mitochondrial, ethyl N-[(4-aminobenzyl)carbamoyl]glycinate
著者Gelin, M, Allemand, F, Labesse, G, Guichou, J.F.
登録日2015-01-15
公開日2015-08-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography.
Acta Crystallogr.,Sect.D, 71, 2015
3T1U
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Crystal Structure of the complex of Cyclophilin-A enzyme from Azotobacter vinelandii with sucAFPFpNA peptide
分子名称: Peptidyl-prolyl cis-trans isomerase, succinyl-Ala-Phe-Pro-Phe-p-nitroanilide
著者Karpusas, M, Christoforides, E, Bethanis, K, Dimou, M, Katinakis, P.
登録日2011-07-22
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a bacterial cytoplasmic cyclophilin A in complex with a tetrapeptide.
Acta Crystallogr.,Sect.F, 68, 2012
3UCH
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BU of 3uch by Molmil
Crystal structure of a peptidyl-prolyl cis-trans isomerase E (PPIE) from Homo sapiens at 2.50 A resolution
分子名称: Peptidyl-prolyl cis-trans isomerase E
著者Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
登録日2011-10-26
公開日2011-11-16
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a Hypotherical Peptidyl-prolyl cis-trans isomerase E (PPIE) from Homo sapiens at 2.50 A resolution
To be published
4TOT
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BU of 4tot by Molmil
Crystal structure of rat cyclophilin D in complex with a potent nonimmunosuppressive inhibitor
分子名称: HEXAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase F, mitochondrial, ...
著者Knapp, M.S, Elling, R.A.
登録日2014-06-06
公開日2014-11-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Potent nonimmunosuppressive cyclophilin inhibitors with improved pharmaceutical properties and decreased transporter inhibition.
J.Med.Chem., 57, 2014
7ZFM
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BU of 7zfm by Molmil
Engineered Protein Targeting the Zika Viral Envelope Fusion Loop
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, HEXAETHYLENE GLYCOL, ...
著者Athayde, D, Archer, M, Viana, I.F.T, Adan, W.C.S, Xavier, L.S.S, Lins, R.D.
登録日2022-04-01
公開日2022-08-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.711 Å)
主引用文献In Vitro Neutralisation of Zika Virus by an Engineered Protein Targeting the Viral Envelope Fusion Loop
SSRN, 2022
4S1E
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BU of 4s1e by Molmil
Crystal structure of cyclophilin mutant L120A from Leishmania donovani at 2.22 angstrom.
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Roy, S, Datta, A.K, Banerjee, R.
登録日2015-01-13
公開日2015-03-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani
To be Published
4S1J
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BU of 4s1j by Molmil
Crystal structure of cyclophilin mutant V33A from Leishmania donovani at 2.3 angstrom.
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Roy, S, Datta, A.K, Banerjee, R.
登録日2015-01-14
公開日2015-03-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization and prediction of thermal stability of cyclophilin mutants from L.donovani
To be Published
7ZDN
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Human Cyclophilin D in complex with fragment
分子名称: (1~{R},9~{R},10~{S})-12-oxa-8-azatricyclo[7.3.1.0^{2,7}]trideca-2(7),3,5-trien-10-ol, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Silva, D.O, Graedler, U, Bandeiras, T.M.
登録日2022-03-29
公開日2023-04-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Human Cyclophilin D in complex with fragment
To Be Published
7L6Y
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BU of 7l6y by Molmil
Crystal Structure of the Peptidyl-Prolyl Cis-Trans Isomerase (PpiB) from Streptococcus pyogenes.
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-12-24
公開日2021-12-01
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal Structure of the Peptidyl-Prolyl Cis-Trans Isomerase (PpiB) from Streptococcus pyogenes.
To Be Published
7L6Z
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BU of 7l6z by Molmil
Crystal Structure of Peptidyl-Prolyl Cis-Trans Isomerasefrom (PpiB) Streptococcus pneumoniae R6
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-12-24
公開日2021-12-01
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal Structure of Peptidyl-Prolyl Cis-Trans Isomerasefrom (PpiB) Streptococcus pneumoniae R6
To Be Published
6BTA
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BU of 6bta by Molmil
CypA Mutant - S99T C115S
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Fraser, J.S, Kenner, L.R, Liu, L.
登録日2017-12-06
公開日2018-04-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rescue of conformational dynamics in enzyme catalysis by directed evolution.
Nat Commun, 9, 2018
8B58
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BU of 8b58 by Molmil
Crystal Structure of Cyclophilin TgCyp23 from Toxoplasma gondii in complex with Cyclosporin A
分子名称: Cyclosporin A, Peptidyl-prolyl cis-trans isomerase
著者Jimenez-Faraco, E, Hermoso, J.A.
登録日2022-09-22
公開日2023-02-01
最終更新日2023-02-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural Basis for Cyclosporin Isoform-Specific Inhibition of Cyclophilins from Toxoplasma gondii .
Acs Infect Dis., 9, 2023
8CU5
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BU of 8cu5 by Molmil
Crystal Structure of Putative Cyclophilin B from Brugia malayi
分子名称: 1,2-ETHANEDIOL, Peptidyl-prolyl cis-trans isomerase, SULFATE ION
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-05-16
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Putative Cyclophilin B from Brugia malayi
to be published
7N3J
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E. coli peptidyl-prolyl cis-trans isomerase, mutant Phe27CF3-Tyr/Phe98CF3-Tyr
分子名称: Peptidyl-prolyl cis-trans isomerase B
著者Frkic, R.L, Otting, G, Jackson, C.J.
登録日2021-06-01
公開日2021-09-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Through-Space Scalar 19 F- 19 F Couplings between Fluorinated Noncanonical Amino Acids for the Detection of Specific Contacts in Proteins.
J.Am.Chem.Soc., 143, 2021
7OGI
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BU of 7ogi by Molmil
Human Cyclophilin D in complex with N-(5-ethyl-4-oxo-1,2,3,4,5,6-hexahydro-1,5-benzodiazocin-8-yl)-7methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
分子名称: DIMETHYL SULFOXIDE, N-(5-ethyl-4-oxidanylidene-1,2,3,6-tetrahydro-1,5-benzodiazocin-8-yl)-7-methyl-2-oxidanylidene-1H-pyrazolo[1,5-a]pyrimidine-6-carboxamide, Peptidyl-prolyl cis-trans isomerase F, ...
著者Silva, D.O, Graedler, U, Bandeiras, T.M.
登録日2021-05-06
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Human Cyclophilin D in complex with N-(5-ethyl-4-oxo-1,2,3,4,5,6-hexahydro-1,5-benzodiazocin-8-yl)-7methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
To Be Published
7PCJ
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BU of 7pcj by Molmil
X-ray structure of CypA-C52AK125C/CsA/aromatic foldamer complex
分子名称: 8-azanyl-4-(2-methylpropoxy)quinoline-2-carboxylic acid, 8-azanyl-4-(3-azanylpropoxy)quinoline-2-carboxylic acid, 8-azanyl-4-oxidanyl-quinoline-2-carboxylic acid, ...
著者Vallade, M, Langlois d'Estaintot, B, Fischer, L, Buratto, J, Savko, M, Huc, I.
登録日2021-08-03
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献X-ray structure of a cystein mutant of Cyclophilin A tethered to an aromatic oligoamide foldamer complexed with Cyclosporin A
To Be Published
6U5C
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BU of 6u5c by Molmil
RT XFEL structure of CypA solved using MESH injection system
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
8EJX
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Crystal structure of human cyclophilin D (CypD) with in complex with the covalently bound Ebselen inhibitor
分子名称: N-phenyl-2-selanylbenzamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Lovell, S, Battaile, K.P, Yan, S.
登録日2022-09-19
公開日2023-10-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献New cyclophilin D inhibitor rescues mitochondrial and cognitive function in Alzheimer's disease.
Brain, 147, 2024
6U5E
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BU of 6u5e by Molmil
RT XFEL structure of CypA solved using celloluse carrier media
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Nango, E, Nakane, T, Young, I.D, Brewster, A.S, Sugahara, M, Tanaka, R, Sauter, N.K, Tono, K, Iwata, S, Fraser, J.S, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
6U5G
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BU of 6u5g by Molmil
MicroED structure of a FIB-milled CypA Crystal
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Martynowycz, M.W, Zhao, W, Gonen, T, Fraser, J.S, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法ELECTRON CRYSTALLOGRAPHY (2.5 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
6U5D
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BU of 6u5d by Molmil
RT XFEL structure of CypA solved using LCP injection system
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Young, I.D, Sierra, R.G, Brewster, A.S, Koralek, J.D, Boutet, S, Sauter, N.K, Fraser, J.S, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
1DYW
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BU of 1dyw by Molmil
Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans
分子名称: CYCLOPHILIN 3
著者Dornan, J, Page, A.P, Taylor, P, Wu, S.Y, Winter, A.D, Husi, H, Walkinshaw, M.D.
登録日2000-02-10
公開日2000-06-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biochemical and Structural Characterization of a Divergent Loop Cyclophilin from Caenorhabditis Elegans
J.Biol.Chem., 274, 1999
3BO7
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Crystal structure of Toxoplasma gondii peptidyl-prolyl cis-trans isomerase, 541.m00136
分子名称: 1,2-ETHANEDIOL, CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYCLOPHILIN-TYPE, ...
著者Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Artz, J.D, Xiao, T, Structural Genomics Consortium (SGC)
登録日2007-12-17
公開日2008-02-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of Toxoplasma Gondii Peptidyl-Prolyl Cis-Trans Isomerase, 541.M00136.
To be Published
3BT8
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Crystal Structure of Mutant Cyclophilin (R147A) from Leishmania donovani
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Venugopal, V, Sen, B, Datta, A.K, Banerjee, R.
登録日2007-12-28
公開日2008-01-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Mutant Cyclophilin from Leishmania Donovani
To be Published
1E3B
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CYCLOPHILIN 3 FROM C.ELEGANS COMPLEXED WITH AUP(ET)3
分子名称: CYCLOPHILIN 3, GOLD ION, TRIETHYLPHOSPHANE
著者Zou, J, Taylor, P, Dornan, J, Robinson, S.P, Walkinshaw, M.D, Sadler, P.J.
登録日2000-06-08
公開日2000-10-22
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献First Crystal Structure of a Medicinally Relevant Gold Protein Complex:Unexpected Binding of [Au(Pet (3))](+) to Histidine
Angew.Chem.Int.Ed.Engl., 39, 2000

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