PDB: 1711 件ウェブページステータス検索Chemie searchBIRD

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8UNH	Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp 分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Sliding clamp, ... 著者 Huang, Y, Marcus, K, Subramanian, S, Gee, L.C, Gorday, K, Ghaffari-Kashani, S, Luo, X, Zhang, L, O'Donnell, M, Subramanian, S, Kuriyan, J. 登録日 2023-10-19 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (3.21 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8UNF	Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp and DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Sliding clamp, ... 著者 Huang, Y, Marcus, K, Subramanian, S, Gee, L.C, Gorday, K, Ghaffari-Kashani, S, Luo, X, Zhang, L, O'Donnell, M, Subramanian, S, Kuriyan, J. 登録日 2023-10-18 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8UK9	Structure of T4 Bacteriophage clamp loader mutant D110C bound to the T4 clamp, primer-template DNA, and ATP analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, DNA primer, ... 著者 Marcus, K, Ghaffari-Kashani, S, Gee, C.L. 登録日 2023-10-12 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8UH7	Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Primer DNA strand, ... 著者 Gee, C.L, Marcus, K, Kelch, B.A, Makino, D.L. 登録日 2023-10-07 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.628 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8VAP	Structure of the E. coli clamp loader bound to the beta clamp in a Fully-Open conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAR	Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA2 conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAL	Structure of the E. coli clamp loader bound to the beta clamp in a Open-DNAp/t conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAQ	Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA1 conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAS	Structure of the E. coli clamp loader bound to the beta clamp in an Altered-Collar conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAN	Structure of the E. coli clamp loader bound to the beta clamp in an Initial-Binding conformation 分子名称: Beta sliding clamp, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ... 著者 Landeck, J.T, Pajak, J, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAT	Structure of the E. coli clamp loader bound to the beta clamp in a Open-RNAp/t conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAM	Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8I6G	Crystal structure of the African swine fever virus DNA sliding clamp (native form) 分子名称: ASFV DNA sliding clamp 著者 Wu, J, Gong, P. 登録日 2023-01-28 公開日 2023-06-07 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp. J.Biol.Chem., 299, 2023
8I6H	Crystal structure of the African swine fever virus DNA sliding clamp (selenomethionine form) 分子名称: ASFV DNA sliding clamp 著者 Wu, J, Gong, P. 登録日 2023-01-28 公開日 2023-06-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.292 Å) 主引用文献 Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp. J.Biol.Chem., 299, 2023
7EVP	Cryo-EM structure of the Gp168-beta-clamp complex 分子名称: Beta sliding clamp, Sliding clamp inhibitor 著者 Liu, B, Li, S, Liu, Y, Chen, H, Hu, Z, Wang, Z, Gou, L, Zhang, L, Ma, B, Wang, H, Matthews, S, Wang, Y, Zhang, K. 登録日 2021-05-21 公開日 2022-02-16 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Bacteriophage Twort protein Gp168 is a beta-clamp inhibitor by occupying the DNA sliding channel. Nucleic Acids Res., 49, 2021
1B77	BUILDING A REPLISOME STRUCTURE FROM INTERACTING PIECES: A SLIDING CLAMP COMPLEXED WITH AN INTERACTION PEPTIDE FROM DNA POLYMERASE 分子名称: PROTEIN (SLIDING CLAMP) 著者 Shamoo, Y, Steitz, T.A. 登録日 1999-01-27 公開日 1999-02-08 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex. Cell(Cambridge,Mass.), 99, 1999
7YBD	Crystal structure of sliding DNA clamp of Clostridioides difficile 分子名称: Beta sliding clamp, TRIETHYLENE GLYCOL 著者 Hishiki, A, Okazaki, S, Hara, K, Hashimoto, H. 登録日 2022-06-29 公開日 2022-10-19 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Crystal structure of the sliding DNA clamp from the Gram-positive anaerobic bacterium Clostridioides difficile. J.Biochem., 173, 2022
6E8E	Crystal structure of the Escherichia coli sliding clamp-MutL complex. 分子名称: Beta sliding clamp,DNA mismatch repair protein MutL, GLYCEROL, SULFATE ION 著者 Guarne, A, Almawi, A.W. 登録日 2018-07-28 公開日 2019-05-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Binding of the regulatory domain of MutL to the sliding beta-clamp is species specific. Nucleic Acids Res., 47, 2019
6E8D	Crystal structure of the Bacillus subtilis sliding clamp-MutL complex. 分子名称: Beta sliding clamp,DNA mismatch repair protein MutL, GLYCEROL 著者 Guarne, A, Almawi, A.W. 登録日 2018-07-28 公開日 2019-05-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Binding of the regulatory domain of MutL to the sliding beta-clamp is species specific. Nucleic Acids Res., 47, 2019
6FVL	DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide 分子名称: Beta sliding clamp, GLYCEROL, P7 peptide, ... 著者 Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D. 登録日 2018-03-04 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.975 Å) 主引用文献 Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis., 2019
6FVM	Mutant DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide 分子名称: Beta sliding clamp, CALCIUM ION, GLYCEROL, ... 著者 Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D. 登録日 2018-03-04 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.631 Å) 主引用文献 Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis., 2019
8PAT	Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 3. 分子名称: ACE-GLN-ALC-GLX-LEU-PHE, Beta sliding clamp 著者 Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, Guichard, G. 登録日 2023-06-08 公開日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp. Jacs Au, 4, 2024
6FVO	Mutant DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide 分子名称: Beta sliding clamp, CALCIUM ION, P7 peptide 著者 Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D. 登録日 2018-03-04 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.689 Å) 主引用文献 Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis., 2019
6FVN	DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide 分子名称: Beta sliding clamp, P7 peptide 著者 Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D. 登録日 2018-03-04 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.142 Å) 主引用文献 Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis., 2019
8PAY	Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2. 分子名称: ACE-GLN-ALC-GLC-LEU-PHE, Beta sliding clamp, GLYCEROL, ... 著者 Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, wagner, J, Guichard, G. 登録日 2023-06-08 公開日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.21 Å) 主引用文献 Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp. Jacs Au, 4, 2024

 

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