PDB: 225399 件ウェブページステータス検索Chemie searchBIRD

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3BQQ	Crystal Structure of Human Saposin D (triclinic) 分子名称: PROACTIVATOR POLYPEPTIDE 著者 Prive, G.G, Popovic, K. 登録日 2007-12-20 公開日 2008-02-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of the human ceramide activator protein saposin D. Acta Crystallogr.,Sect.D, 64, 2008
2PNC	Crystal Structure of Bovine Plasma Copper-Containing Amine Oxidase in Complex with Clonidine 分子名称: 2,6-DICHLORO-N-IMIDAZOLIDIN-2-YLIDENEANILINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Cendron, L, Holt, A, Smith, D.J, Zanotti, G, Rigo, A, Di Paolo, M.L. 登録日 2007-04-24 公開日 2008-02-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Multiple binding sites for substrates and modulators of semicarbazide-sensitive amine oxidases: kinetic consequences Mol.Pharmacol., 73, 2008
1IV3	Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form MG atoms) 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MAGNESIUM ION 著者 Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-11 公開日 2002-09-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
4K3Z	Crystal structure of D-erythrulose 4-phosphate dehydrogenase from Brucella melitensis, solved by iodide SAD 分子名称: 1,2-ETHANEDIOL, D-erythrulose 4-phosphate dehydrogenase, GLYCEROL 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2013-04-11 公開日 2013-05-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of D-erythrulose 4-phosphate dehydrogenase from Brucella melitensis, solved by iodide SAD To be Published
4KCW	Pyruvate kinase (PYK) from Trypanosoma brucei soaked with oxalate 分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ... 著者 Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D. 登録日 2013-04-24 公開日 2014-01-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Pyruvate kinases have an intrinsic and conserved decarboxylase activity. Biochem.J., 458, 2014
2AW2	Crystal structure of the human BTLA-HVEM complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, B and T lymphocyte attenuator, NICKEL (II) ION, ... 著者 Compaan, D.M, Gonzalez, L.C, Tom, I, Loyet, K.M, Eaton, D, Hymowitz, S.G. 登録日 2005-08-31 公開日 2005-09-27 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Attenuating Lymphocyte Activity: the crystal structure of the BTLA-HVEM complex J.Biol.Chem., 280, 2005
4F94	Structure of the Class D Beta-Lactamase OXA-24 K84D in Acyl-Enzyme Complex with Oxacillin 分子名称: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, Beta-lactamase, SULFATE ION 著者 June, C.M, Vallier, B.C, Bonomo, R.A, Leonard, D.A, Powers, R.A. 登録日 2012-05-18 公開日 2013-08-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the Class D Beta-Lactamase OXA-24 K84D in Acyl-Enzyme Complex with Oxacillin To be Published
1J8Q	Low Temperature (100K) Crystal Structure of Flavodoxin D. vulgaris Wild-type at 1.35 Angstrom Resolution 分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN 著者 Artali, R, Bombieri, G, Meneghetti, F, Gilardi, G, Sadeghi, S.J, Cavazzini, D, Rossi, G.L. 登録日 2001-05-22 公開日 2001-09-05 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Comparison of the refined crystal structures of wild-type (1.34 A) flavodoxin from Desulfovibrio vulgaris and the S35C mutant (1.44 A) at 100 K. Acta Crystallogr.,Sect.D, 58, 2002
2GGU	crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with maltotriose 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Head, J.F. 登録日 2006-03-24 公開日 2006-05-02 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Contributions of Phenylalanine 335 to Ligand Recognition by Human Surfactant Protein D: ring interactions with Sp-D ligands J.Biol.Chem., 281, 2006
1U40	IspF with 4-diphosphocytidyl-2C-methyl-D-erythritol 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL, ZINC ION 著者 Steinbacher, S, Kaiser, J, Wungsintaweekul, J, Hecht, S, Eisenreich, W, Gerhardt, S, Bacher, A, Rohdich, F. 登録日 2004-07-23 公開日 2004-08-31 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of 2C-Methyl-D-Erythritol-2,4-Cyclodiphosphate Synthase Involved in Mevalonate Independent Biosynthesis of Isoprenoids J.Mol.Biol., 316, 2002
1M7I	CRYSTAL STRUCTURE OF A MONOCLONAL FAB SPECIFIC FOR SHIGELLA FLEXNERI Y LIPOPOLYSACCHARIDE COMPLEXED WITH A PENTASACCHARIDE 分子名称: alpha-L-rhamnopyranose-(1-2)-alpha-L-rhamnopyranose-(1-3)-alpha-L-rhamnopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-methyl 6-deoxy-alpha-L-rhamnopyranoside, heavy chain of the monoclonal antibody Fab SYA/J6, light chain of the monoclonal antibody Fab SYA/J6 著者 Vyas, N.K, Vyas, M.N, Chervenak, M.C, Johnson, M.A, Pinto, B.M, Bundle, D.R, Quiocho, F.A. 登録日 2002-07-19 公開日 2003-07-22 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular Recognition of Oligosaccharide Epitopes by a Monoclonal Fab Specific for Shigella flexneri Y Lipopolysaccharide: X-ray Structures and Thermodynamics Biochemistry, 41, 2002
3UN3	phosphopentomutase T85Q variant soaked with glucose 1,6-bisphosphate 分子名称: 1,6-di-O-phosphono-alpha-D-glucopyranose, GLYCEROL, MANGANESE (II) ION, ... 著者 Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O. 登録日 2011-11-15 公開日 2012-02-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
1WQ2	Neutron Crystal Structure Of Dissimilatory Sulfite Reductase D (DsrD) 分子名称: Protein dsvD, SULFATE ION 著者 Chatake, T, Mizuno, N, Voordouw, G, Higuchi, Y, Arai, S, Tanaka, I, Niimura, N. 登録日 2004-09-19 公開日 2005-09-19 最終更新日 2023-10-25 実験手法 NEUTRON DIFFRACTION (2.4 Å) 主引用文献 Crystallization and preliminary neutron analysis of the dissimilatory sulfite reductase D (DsrD) protein from the sulfate-reducing bacterium Desulfovibrio vulgaris. Acta Crystallogr.,Sect.D, 59, 2003
1XA2	Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA).d(TGCGCG) in two crystal forms 分子名称: 5'-D(*CP*GP*CP*GP*CP*A)-3', 5'-D(*TP*GP*CP*GP*CP*G)-3', COBALT HEXAMMINE(III) 著者 Thiyagarajan, S, Rajan, S.S, Gautham, N. 登録日 2004-08-25 公開日 2004-11-16 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms. Nucleic Acids Res., 32, 2004
4JX7	Crystal structure of Pim1 kinase in complex with inhibitor 2-[(trans-4-aminocyclohexyl)amino]-4-{[3-(trifluoromethyl)phenyl]amino}pyrido[4,3-d]pyrimidin-5(6H)-one 分子名称: 2-[(trans-4-aminocyclohexyl)amino]-4-{[3-(trifluoromethyl)phenyl]amino}pyrido[4,3-d]pyrimidin-5(6H)-one, PIM1 consensus peptide, Serine/threonine-protein kinase pim-1 著者 Lee, S.J, Han, B.G, Cho, J.W, Choi, J.S, Lee, J.K, Song, H.J, Koh, J.S, Lee, B.I. 登録日 2013-03-27 公開日 2013-08-28 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of pim1 kinase in complex with a pyrido[4,3-d]pyrimidine derivative suggests a unique binding mode. Plos One, 8, 2013
1WUU	crystal structure of human galactokinase complexed with MgAMPPNP and galactose 分子名称: Galactokinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Thoden, J.B, Timson, D.J, Reece, R.J, Holden, H.M. 登録日 2004-12-08 公開日 2004-12-28 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular Structure of Human Galactokinase: IMPLICATIONS FOR TYPE II GALACTOSEMIA J.Biol.Chem., 280, 2005
1N37	NMR Solution Structure of the Anthracycline Respinomycin D Intercalation Complex with a Double Stranded DNA Molecule (AGACGTCT)2 分子名称: 5'-D(*AP*GP*AP*CP*GP*TP*CP*T)-3', RESPINOMYCIN D 著者 Maynard, A.J, Williams, H.E.L, Searle, M.S. 登録日 2002-10-25 公開日 2003-01-28 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 DNA recognition by the Anthracycline Antibiotic Respinomycin D: NMR Structure of the Intercalation Complex with d(AGACGTCT)2 Org.Biomol.Chem., 1, 2003
3QNB	Crystal Structure of an Engineered OXA-10 Variant with Carbapenemase Activity, OXA-10loop24 分子名称: 1,2-ETHANEDIOL, Oxacillinase, SULFATE ION 著者 De Luca, F, Benvenuti, M, Carboni, F, Pozzi, C, Rossolini, G.M, Mangani, S, Docquier, J.D. 登録日 2011-02-08 公開日 2011-11-02 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Evolution to carbapenem-hydrolyzing activity in noncarbapenemase class D {beta}-lactamase OXA-10 by rational protein design. Proc.Natl.Acad.Sci.USA, 108, 2011
1IV2	Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form CDP) 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-11 公開日 2002-09-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. Acta Crystallogr.,Sect.D, 59, 2003
4K9F	Neutron structure of Perdeuterated Rubredoxin refined against 1.75 resolution data collected on the new IMAGINE instrument at HFIR, ORNL 分子名称: FE (III) ION, Rubredoxin 著者 Munshi, P, Meilleur, F, Myles, D. 登録日 2013-04-19 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 NEUTRON DIFFRACTION (1.75 Å) 主引用文献 The IMAGINE instrument: first neutron protein structure and new capabilities for neutron macromolecular crystallography. Acta Crystallogr.,Sect.D, 69, 2013
3D14	Crystal structure of mouse Aurora A (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with 1-{5-[2-(thieno[3,2-d]pyrimidin-4-ylamino)-ethyl]- thiazol-2-yl}-3-(3-trifluoromethyl-phenyl)-urea 分子名称: 1-{5-[2-(thieno[3,2-d]pyrimidin-4-ylamino)ethyl]-1,3-thiazol-2-yl}-3-[3-(trifluoromethyl)phenyl]urea, serine/threonine kinase 6 著者 Elling, R.A, Baskaran, S, Allen, D.A, Oslob, J.D, Romanowski, M.J. 登録日 2008-05-04 公開日 2008-08-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Discovery of a potent and selective aurora kinase inhibitor. Bioorg.Med.Chem.Lett., 18, 2008
2QVC	Crystal structure of a periplasmic sugar ABC transporter from Thermotoga maritima 分子名称: Sugar ABC transporter, periplasmic sugar-binding protein, beta-D-glucopyranose 著者 Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2007-08-08 公開日 2007-08-28 最終更新日 2021-02-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a periplasmic glucose-binding protein from Thermotoga maritima. Acta Crystallogr.,Sect.F, 68, 2012
4K8G	Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G) 分子名称: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ... 著者 Lukk, T, Wichelecki, D, Gerlt, J.A, Nair, S.K. 登録日 2013-04-18 公開日 2013-05-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G) To be Published
3A40	Crystal structure of the human VDR ligand binding domain bound to the synthetic agonist compound 2alpha-methyl-AMCR277B(C23R) 分子名称: (1S,2S,3R,5Z,7E,14beta,17alpha,23R)-23-(2-hydroxy-2-methylpropyl)-2-methyl-20,24-epoxy-9,10-secochola-5,7,10-triene-1,3-diol, SULFATE ION, Vitamin D3 receptor 著者 Sato, Y, Antony, P, Huet, T, Sigueiro, R, Rochel, N, Moras, D, Structural Proteomics in Europe 2 (SPINE-2) 登録日 2009-06-25 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure-function relationships and crystal structures of the vitamin D receptor bound 2 alpha-methyl-(20S,23S)- and 2 alpha-methyl-(20S,23R)-epoxymethano-1 alpha,25-dihydroxyvitamin D3 J.Med.Chem., 53, 2010
1SJJ	Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin 分子名称: actinin 著者 Liu, J, Taylor, D.W, Taylor, K.A. 登録日 2004-03-03 公開日 2004-03-23 最終更新日 2024-02-14 実験手法 ELECTRON CRYSTALLOGRAPHY (20 Å) 主引用文献 A 3-D Reconstruction of Smooth Muscle alpha-Actinin by CryoEm Reveals Two Different Conformations at the Actin-binding Region. J.Mol.Biol., 338, 2004

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