PDB: 42545 件ウェブページステータス検索Chemie searchBIRD

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6X7L	LnmK in complex with 2-nitronate-propionyl-CoA 分子名称: ALANINE, Bifunctional methylmalonyl-CoA:ACP acyltransferase/decarboxylase, SULFATE ION, ... 著者 Stunkard, L.M, Kick, B.J, Lohman, J.R. 登録日 2020-05-30 公開日 2020-06-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structures of LnmK, a Bifunctional Acyltransferase/Decarboxylase, with Substrate Analogues Reveal the Basis for Selectivity and Stereospecificity. Biochemistry, 60, 2021
6X7P	LnmK in complex with 2-sulfonate-propionyl-oxa(dethia)-CoA 分子名称: (2~{R})-1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propane-2-sulfonic acid, (2~{S})-1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propane-2-sulfonic acid, Conserved hypthetical protein, ... 著者 Stunkard, L.M, Kick, B.J, Lohman, J.R. 登録日 2020-05-30 公開日 2020-06-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structures of LnmK, a Bifunctional Acyltransferase/Decarboxylase, with Substrate Analogues Reveal the Basis for Selectivity and Stereospecificity. Biochemistry, 60, 2021
2MCO	Structural studies on dinuclear ruthenium(II) complexes that bind diastereoselectively to an anti-parallel folded human telomere sequence 分子名称: SODIUM ION, human telomere quadruplex, tetrakis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)(mu-tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~13~,N~14~)diruthenium(4+) L enantiomer 著者 Williamson, M.P, Wilson, T, Thomas, J.A, Felix, V, Costa, P.J. 登録日 2013-08-22 公開日 2013-10-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to an Antiparallel Folded Human Telomere Sequence. J.Med.Chem., 56, 2013
1UJ4	Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase 分子名称: CHLORIDE ION, ribose 5-phosphate isomerase 著者 Hamada, K, Ago, H, Sugahara, M, Nodake, Y, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-07-26 公開日 2004-07-13 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi) J.Biol.Chem., 278, 2003
1UJ6	Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase complexed with arabinose-5-phosphate 分子名称: ARABINOSE-5-PHOSPHATE, CHLORIDE ION, ribose 5-phosphate isomerase 著者 Hamada, K, Ago, H, Sugahara, M, Nodake, Y, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-07-26 公開日 2004-07-13 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi) J.Biol.Chem., 278, 2003
1UJ5	Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase complexed with ribose-5-phosphate 分子名称: CHLORIDE ION, RIBULOSE-5-PHOSPHATE, ribose 5-phosphate isomerase 著者 Hamada, K, Ago, H, Sugahara, M, Nodake, Y, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-07-26 公開日 2004-07-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi) J.Biol.Chem., 278, 2003
2MCC	Structural studies on dinuclear ruthenium(II) complexes that bind diastereoselectively to an anti-parallel folded human telomere sequence 分子名称: human_telomere_quadruplex, tetrakis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)(mu-tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~13~,N~14~)diruthenium(4+) 著者 Williamson, M.P, Wilson, T, Thomas, J.A, Felix, V, Costa, P.J. 登録日 2013-08-18 公開日 2013-10-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to an Antiparallel Folded Human Telomere Sequence. J.Med.Chem., 56, 2013
3P8U	Crystal structure of mEosFP in its green state 分子名称: Green to red photoconvertible GPF-like protein EosFP, SULFATE ION, SULFITE ION 著者 Adam, V, Nienhaus, G.U, Bourgeois, D. 登録日 2010-10-15 公開日 2011-10-19 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Rational design of photoconvertible and biphotochromic fluorescent proteins for advanced microscopy applications. Chem.Biol., 18, 2011
8YTI	Crystal Structure of Nucleosome-H1x Linker Histone Assembly (sticky-169a DNA fragment) 分子名称: CALCIUM ION, CHLORIDE ION, DNA (169-MER), ... 著者 Adhireksan, Z, Qiuye, B, Padavattan, S, Davey, C.A. 登録日 2024-03-26 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Linker Histones Associate Heterogeneously with Nucleosomes in the Condensed State To Be Published
2V3W	Crystal structure of the benzoylformate decarboxylase variant L461A from Pseudomonas putida 分子名称: BENZOYLFORMATE DECARBOXYLASE, MAGNESIUM ION, SULFATE ION, ... 著者 Gocke, D, Walter, L, Gauchenova, K, Kolter, G, Knoll, M, Berthold, C.L, Schneider, G, Pleiss, J, Mueller, M, Pohl, M. 登録日 2007-06-25 公開日 2008-01-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Rational Protein Design of Thdp-Dependent Enzymes-Engineering Stereoselectivity. Chembiochem, 9, 2008
6X7M	LnmK in complex with 2-nitronate-propionyl-oxa(dethia)-CoA 分子名称: Bifunctional methylmalonyl-CoA:ACP acyltransferase/decarboxylase, DI(HYDROXYETHYL)ETHER, SULFATE ION, ... 著者 Stunkard, L.M, Kick, B.J, Lohman, J.R. 登録日 2020-05-30 公開日 2020-06-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Structures of LnmK, a Bifunctional Acyltransferase/Decarboxylase, with Substrate Analogues Reveal the Basis for Selectivity and Stereospecificity. Biochemistry, 60, 2021
2O5F	Crystal Structure of DR0079 from Deinococcus radiodurans at 1.9 Angstrom Resolution 分子名称: Putative Nudix hydrolase DR_0079 著者 Kennedy, M.A, Buchko, G.W, Ni, S, Robinson, H. 登録日 2006-12-05 公開日 2007-12-18 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates. Biochemistry, 47, 2008
5LOS	Piriformospora indica PIIN_05872 分子名称: PIIN_05872, SULFATE ION, ZINC ION 著者 Hartmann, M.D, Albrecht, R, Martin, J, Lupas, A.N. 登録日 2016-08-09 公開日 2018-05-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A secreted fungal histidine- and alanine-rich protein regulates metal ion homeostasis and oxidative stress. New Phytol., 227, 2020
3WGT	Crystal structure of D-amino acid oxidase mutant 分子名称: (1R)-1-phenylethanamine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Yasukawa, K, Nakano, S, Asano, Y. 登録日 2013-08-09 公開日 2014-04-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Tailoring D-amino acid oxidase from the pig kidney to R-stereoselective amine oxidase and its use in the deracemization of alpha-methylbenzylamine. Angew.Chem.Int.Ed.Engl., 53, 2014
1HIO	HISTONE OCTAMER (CHICKEN), CHROMOSOMAL PROTEIN, ALPHA CARBONS ONLY 分子名称: HISTONE H2A, HISTONE H2B, HISTONE H3, ... 著者 Arents, G, Moudrianakis, E.N. 登録日 1991-09-19 公開日 1998-11-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The nucleosomal core histone octamer at 3.1 A resolution: a tripartite protein assembly and a left-handed superhelix. Proc.Natl.Acad.Sci.USA, 88, 1991
1V4G	Crystal Structure of gamma-Glutamylcysteine Synthetase from Escherichia coli B 分子名称: Glutamate--cysteine ligase 著者 Hibi, T, Nii, H, Nakatsu, T, Kato, H, Hiratake, J, Oda, J. 登録日 2003-11-13 公開日 2004-10-05 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of gamma-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis PROC.NATL.ACAD.SCI.USA, 101, 2004
3QRW	Actinorhodin Polyketide Ketoreductase Mutant P94L bound to NADPH 分子名称: FORMIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ketoacyl reductase 著者 Korman, T.P, Javidpour, P, Tsai, S.-C. 登録日 2011-02-18 公開日 2011-05-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.792 Å) 主引用文献 Structural and Biochemical Analyses of Regio- and Stereospecificities Observed in a Type II Polyketide Ketoreductase. Biochemistry, 50, 2011
2QNA	Crystal structure of human Importin-beta (127-876) in complex with the IBB-domain of Snurportin1 (1-65) 分子名称: Importin subunit beta-1, SULFATE ION, Snurportin-1 著者 Wohlwend, D, Strasser, A, Dickmanns, A, Ficner, R. 登録日 2007-07-18 公開日 2008-04-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Structural basis for RanGTP independent entry of spliceosomal U snRNPs into the nucleus. J.Mol.Biol., 374, 2007
3D8Y	RNase A- 5'-Deoxy-5'-N-piperidinothymidine complex 分子名称: 5'-deoxy-5'-piperidin-1-ylthymidine, CITRATE ANION, Ribonuclease pancreatic 著者 Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-05-26 公開日 2009-02-10 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation J.Med.Chem., 52, 2009
3D8Z	RNase A- 5'-Deoxy-5'-N-pyrrolidinothymidine complex 分子名称: 1-(2,5-dideoxy-5-pyrrolidin-1-yl-beta-L-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dione, CITRATE ANION, Ribonuclease pancreatic 著者 Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-05-26 公開日 2009-02-10 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation J.Med.Chem., 52, 2009
4I43	Crystal structure of Prp8:Aar2 complex 分子名称: A1 cistron-splicing factor AAR2, Pre-mRNA-splicing factor 8 著者 Galej, W.P, Oubridge, C, Newman, A.J, Nagai, K. 登録日 2012-11-27 公開日 2013-01-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of Prp8 reveals active site cavity of the spliceosome. Nature, 493, 2013
2DRW	The crystal structutre of D-amino acid amidase from Ochrobactrum anthropi SV3 分子名称: BARIUM ION, D-Amino acid amidase 著者 Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T. 登録日 2006-06-15 公開日 2006-07-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure and Functional Characterization of a D-Stereospecific Amino Acid Amidase from Ochrobactrum anthropi SV3, a New Member of the Penicillin-recognizing Proteins J.Mol.Biol., 368, 2007
2DNS	The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with D-Phenylalanine 分子名称: BARIUM ION, D-PHENYLALANINE, D-amino acid amidase 著者 Okazaki, S, Suzuki, A, Komeda, H, Asano, Y, Yamane, T. 登録日 2006-04-26 公開日 2006-05-09 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure and Functional Characterization of a D-Stereospecific Amino Acid Amidase from Ochrobactrum anthropi SV3, a New Member of the Penicillin-recognizing Proteins J.Mol.Biol., 368, 2007
3SIU	Structure of a hPrp31-15.5K-U4atac 5' stem loop complex, monomeric form 分子名称: NHP2-like protein 1, SULFATE ION, U4/U6 small nuclear ribonucleoprotein Prp31, ... 著者 Liu, S, Ghalei, H, Luhrmann, R, Wahl, M.C. 登録日 2011-06-20 公開日 2011-08-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.626 Å) 主引用文献 Structural basis for the dual U4 and U4atac snRNA-binding specificity of spliceosomal protein hPrp31. Rna, 17, 2011
5ZWN	Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 snRNP region) 分子名称: 56 kDa U1 small nuclear ribonucleoprotein component, Pre-mRNA-processing factor 39, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, ... 著者 Bai, R, Wan, R, Yan, C, Lei, J, Shi, Y. 登録日 2018-05-16 公開日 2018-08-29 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of the fully assembledSaccharomyces cerevisiaespliceosome before activation Science, 360, 2018

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