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1HK9
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BU of 1hk9 by Molmil
Crystal structure of the Hfq protein from Escherichia coli
分子名称: PROTEIN HFQ
著者Sauter, C, Basquin, J, Suck, D.
登録日2003-03-06
公開日2003-07-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Sm-Like Proteins in Eubacteria: The Crystal Structure of the Hfq Protein from Escherichia Coli
Nucleic Acids Res., 31, 2003
3V2A
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BU of 3v2a by Molmil
VEGFR-2/VEGF-A COMPLEX STRUCTURE
分子名称: Vascular endothelial growth factor A, Vascular endothelial growth factor receptor 2
著者Brozzo, M.S, Leppanen, V.-M, Winkler, F.K, Ballmer-Hofer, K.
登録日2011-12-12
公開日2012-01-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.204 Å)
主引用文献Thermodynamic and structural description of allosterically regulated VEGFR-2 dimerization.
Blood, 119, 2012
9DQT
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BU of 9dqt by Molmil
Binary substrate complex of DNA polymerase iota with DNA (template A)
分子名称: CALCIUM ION, DNA (5'-D(P*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase iota
著者Frevert, Z, Reusch, D, Freudenthal, B, Washington, M.T.
登録日2024-09-24
公開日2025-07-09
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Visualizing DNA polymerase iota catalyze Hoogsteen-directed DNA synthesis
Nat Commun, 16, 2025
3V35
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Aldose reductase complexed with a nitro compound
分子名称: 2-[(5-nitro-1,3-thiazol-2-yl)carbamoyl]phenyl acetate, Aldose reductase, DIMETHYLFORMAMIDE, ...
著者Zheng, X, Zhang, L, Chen, Y, Luo, H, Hu, X.
登録日2011-12-13
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Partial inhibition of aldose reductase by nitazoxanide and its molecular basis.
Chemmedchem, 7, 2012
4IFH
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BU of 4ifh by Molmil
Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM44619
分子名称: Insulin-degrading enzyme, N-({1-[(2R)-4-(hydroxyamino)-1-(naphthalen-2-yl)-4-oxobutan-2-yl]-1H-1,2,3-triazol-4-yl}methyl)-4-methylbenzamide, ZINC ION
著者Liang, W.G, Guo, Q, Deprez, R, Deprez, B, Tang, W.
登録日2012-12-14
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.286 Å)
主引用文献Catalytic site inhibition of insulin-degrading enzyme by a small molecule induces glucose intolerance in mice.
Nat Commun, 6, 2015
9DQU
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BU of 9dqu by Molmil
Product complex of DNA polymerase iota with Pyrophosphate
分子名称: DNA (5'-D(P*AP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*CP*T)-3'), DNA polymerase iota, MAGNESIUM ION, ...
著者Frevert, Z, Reusch, D, Freudenthal, B, Washington, M.T.
登録日2024-09-24
公開日2025-07-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Visualizing DNA polymerase iota catalyze Hoogsteen-directed DNA synthesis
Nat Commun, 16, 2025
3I4N
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BU of 3i4n by Molmil
8-oxoguanine containing RNA polymerase II elongation complex E
分子名称: DNA (5'-D(*AP*G*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP*(8OG)P*GP*CP*CP*(BRU)P*GP*GP*TP*CP*AP*TP*T)-3'), DNA (5'-D(*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*T)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Damsma, G.E, Cramer, P.
登録日2009-07-02
公開日2009-09-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Molecular basis of transcriptional mutagenesis at 8-oxoguanine
J.Biol.Chem., 284, 2009
6RIT
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BU of 6rit by Molmil
Human Carbonic Anhydrase II in complex with 2-Fluorobenzenesulfonamide
分子名称: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2-fluorobenzenesulfonamide, Carbonic anhydrase 2, ...
著者Gloeckner, S, Heine, A, Klebe, G.
登録日2019-04-25
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.007 Å)
主引用文献The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
9DR7
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BU of 9dr7 by Molmil
Product complex of DNA polymerase iota with 2 monophosphates
分子名称: DNA (5'-D(P*AP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*CP*T)-3'), DNA polymerase iota, MAGNESIUM ION, ...
著者Frevert, Z, Reusch, D, Freudenthal, B, Washington, M.T.
登録日2024-09-25
公開日2025-07-09
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Visualizing DNA polymerase iota catalyze Hoogsteen-directed DNA synthesis
Nat Commun, 16, 2025
9DRB
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BU of 9drb by Molmil
Binary complex of DNA polymerase iota with product DNA
分子名称: DNA (5'-D(P*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*CP*T)-3'), DNA polymerase iota
著者Frevert, Z, Reusch, D, Freudenthal, B, Washington, M.T.
登録日2024-09-25
公開日2025-07-09
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Visualizing DNA polymerase iota catalyze Hoogsteen-directed DNA synthesis
Nat Commun, 16, 2025
8DTB
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BU of 8dtb by Molmil
Focus/local refined map in C1 of signal subtracted RyR1 particles in complex with ImperaCalcin
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, Imperacalcin, ...
著者Haji-Ghassemi, O, Van Petegm, F.
登録日2022-07-25
公開日2023-05-31
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
9DRC
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BU of 9drc by Molmil
Ternary substrate complex of DNA polymerase iota R71A mutant with DNA (template A) and dTTP
分子名称: CALCIUM ION, DNA (5'-D(P*AP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase iota, ...
著者Frevert, Z, Reusch, D, Freudenthal, B, Washington, M.T.
登録日2024-09-25
公開日2025-07-09
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Visualizing DNA polymerase iota catalyze Hoogsteen-directed DNA synthesis
Nat Commun, 16, 2025
6JCK
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BU of 6jck by Molmil
Complex structure of Axin-DIX and Dvl2-DIX
分子名称: Axin-1, Segment polarity protein dishevelled homolog DVL-2
著者Yamanishi, K, Shibata, N.
登録日2019-01-29
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献A direct heterotypic interaction between the DIX domains of Dishevelled and Axin mediates signaling to beta-catenin.
Sci.Signal., 12, 2019
3L9I
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BU of 3l9i by Molmil
Myosin VI nucleotide-free (mdinsert2) L310G mutant crystal structure
分子名称: ACETATE ION, CALCIUM ION, Calmodulin, ...
著者Pylypenko, O, Song, L, Sweeney, L.H, Houdusse, A.
登録日2010-01-05
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Role of insert i of myosin VI in modulating nucleotide affinity
To be Published
8DVE
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BU of 8dve by Molmil
RyR1 in presence of IpCa-T26E phosphomimetic and activating ligands
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Haji-Ghassemi, O, Van Petegm, F.
登録日2022-07-28
公開日2023-05-31
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
6UX1
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BU of 6ux1 by Molmil
Carbonic Anhydrase II Complexed with Salicylic Acid
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-HYDROXYBENZOIC ACID, Carbonic anhydrase 2, ...
著者Andring, J.T, Combs, J.E, McKenna, R.
登録日2019-11-06
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Aspirin: A Suicide Inhibitor of Carbonic Anhydrase II.
Biomolecules, 10, 2020
1R7E
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BU of 1r7e by Molmil
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus (Minimized average structure. Sample in 100mM SDS).
分子名称: Genome polyprotein
著者Penin, F, Brass, V, Appel, N, Ramboarina, S, Montserret, R, Ficheux, D, Blum, H.E, Bartenschlager, R, Moradpour, D.
登録日2003-10-21
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and function of the membrane anchor domain of hepatitis C virus nonstructural protein 5A.
J.Biol.Chem., 279, 2004
1R7H
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BU of 1r7h by Molmil
NrdH-redoxin of Corynebacterium ammoniagenes forms a domain-swapped dimer
分子名称: NrdH-redoxin
著者Stehr, M, Lindqvist, Y.
登録日2003-10-21
公開日2004-05-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献NrdH-redoxin of Corynebacterium ammoniagenes forms a domain-swapped dimer.
Proteins, 55, 2004
3J0K
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BU of 3j0k by Molmil
Orientation of RNA polymerase II within the human VP16-Mediator-pol II-TFIIF assembly
分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ...
著者Bernecky, C, Grob, P, Ebmeier, C.C, Nogales, E, Taatjes, D.J.
登録日2011-10-04
公開日2011-10-19
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (36 Å)
主引用文献Molecular architecture of the human Mediator-RNA polymerase II-TFIIF assembly.
Plos Biol., 9, 2011
6UQK
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BU of 6uqk by Molmil
Cryo-EM structure of type 3 IP3 receptor revealing presence of a self-binding peptide
分子名称: ZINC ION, inositol 1,4,5-triphosphate receptor, type 3
著者Azumaya, C.M, Linton, E.A, Risener, C.J, Nakagawa, T, Karakas, E.
登録日2019-10-20
公開日2020-01-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Cryo-EM structure of human type-3 inositol triphosphate receptor reveals the presence of a self-binding peptide that acts as an antagonist.
J.Biol.Chem., 295, 2020
6ROF
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BU of 6rof by Molmil
Human Carbonic anhydrase II mutant T199V bound by 2-(cyclooctylamino)-3,5,6-trifluoro-4-[(2-hydroxyethyl)thio]benzenesulfonamide
分子名称: 2-(cyclooctylamino)-3,5,6-trifluoro-4-[(2-hydroxyethyl)sulfanyl]benzenesulfonamide, BICINE, Carbonic anhydrase 2, ...
著者Smirnov, A, Paketuryte, V, Manakova, E, Grazulis, S.
登録日2019-05-12
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Human Carbonic anhydrase II mutant T199V bound by 2-(cyclooctylamino)-3,5,6-trifluoro-4-[(2-hydroxyethyl)thio]benzenesulfonamide
To Be Published
6JH6
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BU of 6jh6 by Molmil
Structure of RyR2 (F/A/Ca2+ dataset)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Peptidyl-prolyl cis-trans isomerase FKBP1B, RyR2, ...
著者Chi, X.M, Gong, D.S, Ren, K, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Zhou, Q, Yan, N.
登録日2019-02-17
公開日2019-12-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Molecular basis for allosteric regulation of the type 2 ryanodine receptor channel gating by key modulators.
Proc.Natl.Acad.Sci.USA, 116, 2019
1ZQG
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BU of 1zqg by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL MOTHER LIQUOR AT PH 6.5
分子名称: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ...
著者Pelletier, H, Sawaya, M.R.
登録日1996-04-12
公開日1996-11-15
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis.
Biochemistry, 35, 1996
1ZQS
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BU of 1zqs by Molmil
DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF TLCL (0.5 MILLIMOLAR)
分子名称: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ...
著者Pelletier, H, Sawaya, M.R.
登録日1996-04-12
公開日1996-11-15
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis.
Biochemistry, 35, 1996
6JRR
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BU of 6jrr by Molmil
Structure of RyR2 (*F/A/C/L-Ca2+ dataset)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Gong, D.S, Chi, X.M, Zhou, G.W, Huang, G.X.Y, Lei, J.L, Yan, N.
登録日2019-04-05
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Modulation of cardiac ryanodine receptor 2 by calmodulin.
Nature, 572, 2019

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件を2025-07-09に公開中

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