Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4YDF
DownloadVisualize
BU of 4ydf by Molmil
Crystal structure of compound 9 in complex with HTLV-1 Protease
分子名称: HTLV-1 Protease, N-benzyl-N-[(3S,4S)-4-{benzyl[(4-nitrophenyl)sulfonyl]amino}pyrrolidin-3-yl]-3-nitrobenzenesulfonamide, SULFATE ION
著者Kuhnert, M, Blum, A, Steuber, H, Diederich, W.E.
登録日2015-02-22
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Privileged Structures Meet Human T-Cell Leukemia Virus-1 (HTLV-1): C2-Symmetric 3,4-Disubstituted Pyrrolidines as Nonpeptidic HTLV-1 Protease Inhibitors.
J.Med.Chem., 58, 2015
4YLC
DownloadVisualize
BU of 4ylc by Molmil
Crystal Structure of Del-C4 mutant of hsp14.1 from Sulfolobus solfatataricus P2
分子名称: CHLORIDE ION, Heat shock protein Hsp20
著者Liu, L, Chen, J.Y, Yun, C.H.
登録日2015-03-05
公開日2015-11-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Active-State Structures of a Small Heat-Shock Protein Revealed a Molecular Switch for Chaperone Function
Structure, 23, 2015
2MOQ
DownloadVisualize
BU of 2moq by Molmil
Solution Structure and Molecular determinants of Hemoglobin Binding of the first NEAT Domain of IsdB in Staphylococcus aureus
分子名称: Iron-regulated surface determinant protein B
著者Fonner, B.A, Tripet, B.P, Eilers, B.J, Stanisich, J, Sullivan-Springhetti, R.K, Moore, R, Lui, M, Lei, B, Copie, V.
登録日2014-04-29
公開日2014-07-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure and Molecular Determinants of Hemoglobin Binding of the First NEAT Domain of IsdB in Staphylococcus aureus.
Biochemistry, 53, 2014
5UIF
DownloadVisualize
BU of 5uif by Molmil
Crystal Structure of Native Ps01740
分子名称: Ps01740
著者LeVieux, J, Baas, B.J, Zhang, Y.J, Whitman, C.P.
登録日2017-01-13
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Kinetic and structural characterization of a cis-3-Chloroacrylic acid dehalogenase homologue in Pseudomonas sp. UW4: A potential step between subgroups in the tautomerase superfamily.
Arch. Biochem. Biophys., 636, 2017
4YMK
DownloadVisualize
BU of 4ymk by Molmil
Crystal Structure of Stearoyl-Coenzyme A Desaturase 1
分子名称: Acyl-CoA desaturase 1, STEAROYL-COENZYME A, ZINC ION, ...
著者Bai, Y, McCoy, J.G, Rajashankar, K.R, Zhou, M.
登録日2015-03-06
公開日2015-06-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.605 Å)
主引用文献X-ray structure of a mammalian stearoyl-CoA desaturase.
Nature, 524, 2015
2MQP
DownloadVisualize
BU of 2mqp by Molmil
Structural Investigation of hnRNP L bound to RNA
分子名称: Protein Hnrnpl, RNA (5'-R(*AP*CP*AP*CP*AP*C)-3')
著者Blatter, M, Allain, F.
登録日2014-06-24
公開日2015-12-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Investigation of hnRNP L bound to RNA
To be Published
2MU7
DownloadVisualize
BU of 2mu7 by Molmil
Shortening and modifying the 1513 MSP-1 peptide's alpha-helical region induces protection against malaria
分子名称: 1513 MSP-1 peptide
著者Espejo, F, Bermudez, A, Torres, E, Urquiza, M, Rodriguez, R, Lopez, Y, Patarroyo, M.
登録日2014-09-04
公開日2014-11-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Shortening and modifying the 1513 MSP-1 peptide's alpha-helical region induces protection against malaria.
Biochem.Biophys.Res.Commun., 315, 2004
5UKW
DownloadVisualize
BU of 5ukw by Molmil
Crystal structure of human Glucose 6-phosphate Dehydrogenase mutant (A277C) complexed with G6P
分子名称: 6-O-phosphono-beta-D-glucopyranose, GLYCEROL, Glucose-6-phosphate 1-dehydrogenase
著者Ranzani, A.T, Cordeiro, A.T.
登録日2017-01-23
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Mutations in the tetramer interface of human glucose-6-phosphate dehydrogenase reveals kinetic differences between oligomeric states.
FEBS Lett., 591, 2017
5UJ9
DownloadVisualize
BU of 5uj9 by Molmil
Cryo-EM structure of bovine multidrug resistance protein 1 (MRP1)
分子名称: bovine multidrug resistance protein 1 (MRP1),Multidrug resistance-associated protein 1
著者Johnson, Z.L, Chen, J.
登録日2017-01-17
公開日2017-02-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structural Basis of Substrate Recognition by the Multidrug Resistance Protein MRP1.
Cell, 168, 2017
4YO1
DownloadVisualize
BU of 4yo1 by Molmil
Structure of Legionella pneumophila DegQ (delta PDZ2 variant)
分子名称: CADMIUM ION, DegQ
著者Wrase, R, Hilgenfeld, R, Hansen, G.
登録日2015-03-11
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of DegQ from Legionella pneumophila Define Distinct ON and OFF States.
J.Mol.Biol., 427, 2015
5ULX
DownloadVisualize
BU of 5ulx by Molmil
Structure of human DNA polymerase iota bound to template 1-methyl-deoxyadenosine crystallized in the presence of dCTP
分子名称: CHLORIDE ION, DNA (5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3'), DNA (5'-D(P*(MA7)P*GP*GP*GP*TP*CP*CP*T)-3'), ...
著者Jain, R, Aggarwal, A.K.
登録日2017-01-25
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Mechanism of error-free DNA synthesis across N1-methyl-deoxyadenosine by human DNA polymerase-iota.
Sci Rep, 7, 2017
2MWG
DownloadVisualize
BU of 2mwg by Molmil
Full-Length Solution Structure Of YtvA, a LOV-Photoreceptor Protein and Regulator of Bacterial Stress Response
分子名称: Blue-light photoreceptor, FLAVIN MONONUCLEOTIDE
著者Jurk, M, Bardiaux, B, Schmieder, P.
登録日2014-11-07
公開日2016-05-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of YtvA from Bacillus subtilis Provides Insight into Activation Mechanism and Regulation of Bacterial Stress Response.
To be Published
4YIH
DownloadVisualize
BU of 4yih by Molmil
Crystal structure of human cytosolic 5'(3')-deoxyribonucleotidase in complex with the inhibitor PB-PVU
分子名称: 1-{2-deoxy-3,5-O-[phenyl(phosphono)methylidene]-beta-D-threo-pentofuranosyl}-5-[(E)-2-phosphonoethenyl]pyrimidine-2,4(1H,3H)-dione, 5'(3')-deoxyribonucleotidase, cytosolic type, ...
著者Pachl, P, Rezacova, P, Brynda, J.
登録日2015-03-02
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure-based design of a bisphosphonate 5'(3')-deoxyribonucleotidase inhibitor
Medchemcomm, 6, 2015
6BFZ
DownloadVisualize
BU of 6bfz by Molmil
Crystal structure of enolase from E. coli with a mixture of apo form, substrate, and product form
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-PHOSPHOGLYCERIC ACID, Enolase, ...
著者Erlandsen, H, Wright, D, Krucinska, J.
登録日2017-10-27
公開日2018-10-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural and Functional Studies of Bacterial Enolase, a Potential Target against Gram-Negative Pathogens.
Biochemistry, 58, 2019
4YIR
DownloadVisualize
BU of 4yir by Molmil
Crystal structure of Rad4-Rad23 crosslinked to an undamaged DNA
分子名称: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*CP*G*GP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*CP*CP*CP*GP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
著者Min, J.-H, Chen, X, Kim, Y.
登録日2015-03-02
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.0501 Å)
主引用文献Kinetic gating mechanism of DNA damage recognition by Rad4/XPC.
Nat Commun, 6, 2015
5UKP
DownloadVisualize
BU of 5ukp by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522.1 Fab
分子名称: DH522.1 Fab fragment heavy chain, DH522.1 Fab fragment light chain
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
5UKN
DownloadVisualize
BU of 5ukn by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522UCA Fab
分子名称: CHLORIDE ION, DH522UCA Fab fragment heavy chain, DH522UCA Fab fragment light chain
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
4YQE
DownloadVisualize
BU of 4yqe by Molmil
Crystal structure of E. coli WrbA in complex with benzoquinone
分子名称: 1,4-benzoquinone, FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
著者Degtjarik, O, Brynda, J, Ettrichova, O, Carey, J, Kuta Smatanova, I, Ettrich, R.
登録日2015-03-13
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA.
J.Phys.Chem.B, 120, 2016
5V18
DownloadVisualize
BU of 5v18 by Molmil
Structure of PHD2 in complex with 1,2,4-Triazolo-[1,5-a]pyridine
分子名称: 4-([1,2,4]triazolo[1,5-a]pyridin-5-yl)benzonitrile, Egl nine homolog 1, FE (II) ION, ...
著者Skene, R.J.
登録日2017-03-01
公開日2017-06-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献1,2,4-Triazolo-[1,5-a]pyridine HIF Prolylhydroxylase Domain-1 (PHD-1) Inhibitors With a Novel Monodentate Binding Interaction.
J. Med. Chem., 60, 2017
5UOB
DownloadVisualize
BU of 5uob by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with (R)-3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-(2-(methylamino)propyl)benzonitrile
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-[(2R)-2-(methylamino)propyl]benzonitrile, CHLORIDE ION, ...
著者Chreifi, G, Li, H, Poulos, T.L.
登録日2017-01-31
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
2NBZ
DownloadVisualize
BU of 2nbz by Molmil
Solution structure of the K domain of EMCV IRES
分子名称: IRES RNA 40-MER
著者Imai, S, D'Souza, V, Wagner, G.
登録日2016-03-16
公開日2016-08-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
6B7A
DownloadVisualize
BU of 6b7a by Molmil
Crystal structure of E.coli Phosphopantetheine Adenylyltransferase (PPAT/CoaD) in complex with 2-methyl-1H-benzo[d]imidazol-4-ol
分子名称: 2-methyl-1H-benzimidazol-7-ol, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Proudfoot, A.W, Bussiere, D, Lingel, A.
登録日2017-10-03
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献High-Confidence Protein-Ligand Complex Modeling by NMR-Guided Docking Enables Early Hit Optimization.
J. Am. Chem. Soc., 139, 2017
4Y3S
DownloadVisualize
BU of 4y3s by Molmil
Endothiapepsin in complex with fragment 266
分子名称: 6-(dimethylamino)pyridine-3-carboxylic acid, ACETATE ION, Endothiapepsin, ...
著者Krimmer, S.G, Heine, A, Klebe, G.
登録日2015-02-10
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
4Y47
DownloadVisualize
BU of 4y47 by Molmil
Endothiapepsin in complex with fragment 162
分子名称: 4-oxo-N-[(1S)-1-(pyridin-3-yl)ethyl]-4-(thiophen-2-yl)butanamide, ACETATE ION, Endothiapepsin, ...
著者Krimmer, S.G, Krug, M, Uehlein, M, Heine, A, Klebe, G.
登録日2015-02-10
公開日2016-02-17
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
2N7A
DownloadVisualize
BU of 2n7a by Molmil
Solution structure of the human Siglec-8 lectin domain
分子名称: Sialic acid-binding Ig-like lectin 8
著者Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
登録日2015-09-07
公開日2016-07-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon