Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FP5
DownloadVisualize
BU of 8fp5 by Molmil
CDK2 liganded with ATP and Mg2+
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Cyclin-dependent kinase 2, ...
著者Schonbrunn, E, Sun, L.
登録日2023-01-04
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
8FP0
DownloadVisualize
BU of 8fp0 by Molmil
Ternary complex of CDK2 with small molecule ligands TW8672 and Roscovitine
分子名称: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-nitrobenzoic acid, Cyclin-dependent kinase 2, ...
著者Schonbrunn, E, Sun, L.
登録日2023-01-03
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
5FD5
DownloadVisualize
BU of 5fd5 by Molmil
manganese uptake regulator
分子名称: 1,2-ETHANEDIOL, Ferric uptake regulation protein, SULFATE ION
著者Bellini, D, Lebedev, A, Keegan, R, Walsh, M.A.
登録日2015-12-15
公開日2016-12-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structure of an apo metal-free manganese uptake regulator, mur
To Be Published
6D4G
DownloadVisualize
BU of 6d4g by Molmil
N-GTPase domain of p190RhoGAP-A
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 35
著者Stiegler, A.L, Boggon, T.J.
登録日2018-04-18
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The N-Terminal GTPase Domain of p190RhoGAP Proteins Is a PseudoGTPase.
Structure, 26, 2018
5FP6
DownloadVisualize
BU of 5fp6 by Molmil
Structure of cyclin-dependent kinase 2 with small-molecule ligand 3-(4,7-dichloro-1H-indol-3-yl)prop-2-yn-1-ol (AT17833) in an alternate binding site.
分子名称: 3-(4,7-dichloro-1H-indol-3-yl)prop-2-yn-1-ol, CYCLIN-DEPENDENT KINASE 2
著者Jhoti, H, Ludlow, R.F, O'Reilly, M, Saini, H.K, Tickle, I.J, Verdonk, M.
登録日2015-11-27
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
5GJR
DownloadVisualize
BU of 5gjr by Molmil
An atomic structure of the human 26S proteasome
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Huang, X.L, Luan, B, Wu, J.P, Shi, Y.G.
登録日2016-07-01
公開日2016-09-07
最終更新日2019-10-09
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献An atomic structure of the human 26S proteasome.
Nat. Struct. Mol. Biol., 23, 2016
1MY7
DownloadVisualize
BU of 1my7 by Molmil
NF-kappaB p65 subunit dimerization domain homodimer N202R mutation
分子名称: NF-kappaB p65 (RelA) subunit
著者Huxford, T, Mishler, D, Phelps, C.B, Huang, D.-B, Sengchanthalangsy, L.L, Reeves, R, Hughes, C.A, Komives, E.A, Ghosh, G.
登録日2002-10-03
公開日2002-12-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Solvent exposed non-contacting amino acids play a critical role in NF-kappaB/IkappaB alpha complex formation
J.Mol.Biol., 324, 2002
2EBL
DownloadVisualize
BU of 2ebl by Molmil
Solution structure of the Zinc finger, C4-type domain of human COUP transcription factor 1
分子名称: COUP transcription factor 1, ZINC ION
著者Yoneyama, M, Koshiba, S, Watabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-09
公開日2008-02-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the Zinc finger, C4-type domain of human COUP transcription factor 1
To be Published
6YL6
DownloadVisualize
BU of 6yl6 by Molmil
Cdk2(F80C)
分子名称: Cyclin-dependent kinase 2
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2020-04-06
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Multiparameter Kinetic Analysis for Covalent Fragment Optimization by Using Quantitative Irreversible Tethering (qIT).
Chembiochem, 21, 2020
5GPE
DownloadVisualize
BU of 5gpe by Molmil
Crystal structure of the transcription regulator PbrR691 from Ralstonia metallidurans CH34 in complex with Lead(II)
分子名称: LEAD (II) ION, Transcriptional regulator, MerR-family
著者Huang, S.Q, Chen, W.Z, Wang, D, Hu, Q.Y, Liu, X.C, Gan, J.H, Chen, H.
登録日2016-08-01
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural Basis for the Selective Pb(II) Recognition of Metalloregulatory Protein PbrR691
Inorg Chem, 55, 2016
8AGA
DownloadVisualize
BU of 8aga by Molmil
Structure of p-hydroxy benzoic acid ligand bound HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, P-HYDROXYBENZOIC ACID, ...
著者Goswami, A, Kannika, B.R, Madan Kumar, S.
登録日2022-07-19
公開日2023-08-02
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Horizontally acquired HosA transcription factor bound with 4-hydroxy-benzoic acid exhibits unique tug-of-water dynamics
Biorxiv, 2024
5FD6
DownloadVisualize
BU of 5fd6 by Molmil
zinc-bound manganese uptake regulator
分子名称: Ferric uptake regulation protein, GLYCEROL, SULFATE ION, ...
著者Bellini, D, Hemmings, A.M, Walsh, M.A.
登録日2015-12-15
公開日2016-12-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献structure of a zinc-bound manganese uptake regulator, mur
To Be Published
2FBQ
DownloadVisualize
BU of 2fbq by Molmil
The crystal structure of transcriptional regulator PA3006
分子名称: probable transcriptional regulator
著者Lunin, V.V, Skarina, T, Onopriyenko, O, Kim, Y, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-12-09
公開日2005-12-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of transcriptional regulator PA3006
To be Published
6YLK
DownloadVisualize
BU of 6ylk by Molmil
Cdk2(F80C) with Covalent Adduct TK22 at F80C
分子名称: Cyclin-dependent kinase 2, methyl 4-ethyl-1-propanoyl-2,3-dihydroquinoxaline-6-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2020-04-07
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Multiparameter Kinetic Analysis for Covalent Fragment Optimization by Using Quantitative Irreversible Tethering (qIT).
Chembiochem, 21, 2020
8H6T
DownloadVisualize
BU of 8h6t by Molmil
Complex structure of CDK2/Cyclin E1 and a potent, selective small molecule inhibitor
分子名称: (1R,3S)-3-{3-[(pyridin-2-yl)amino]-1H-pyrazol-5-yl}cyclopentyl propan-2-ylcarbamate, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
著者Ren, X.
登録日2022-10-18
公開日2023-02-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Accelerated Discovery of Macrocyclic CDK2 Inhibitor QR-6401 by Generative Models and Structure-Based Drug Design.
Acs Med.Chem.Lett., 14, 2023
7DVQ
DownloadVisualize
BU of 7dvq by Molmil
Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, 5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(methoxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine, Armadillo repeat-containing protein 7, ...
著者Bai, R, Wan, R, Wang, L, Xu, K, Zhang, Q, Lei, J, Shi, Y.
登録日2021-01-14
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structure of the activated human minor spliceosome.
Science, 371, 2021
8H6P
DownloadVisualize
BU of 8h6p by Molmil
Complex structure of CDK2/Cyclin E1 and a potent, selective macrocyclic inhibitor
分子名称: (7S,10R)-11-oxa-2,4,5,13,17,23-hexaazatetracyclo[17.3.1.1~3,6~.1~7,10~]pentacosa-1(23),3(25),5,19,21-pentaene-12,18-dione, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
著者Ren, X.
登録日2022-10-18
公開日2023-02-22
最終更新日2023-03-29
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Accelerated Discovery of Macrocyclic CDK2 Inhibitor QR-6401 by Generative Models and Structure-Based Drug Design.
Acs Med.Chem.Lett., 14, 2023
7EGG
DownloadVisualize
BU of 7egg by Molmil
TFIID lobe B subcomplex
分子名称: Transcription initiation factor TFIID subunit 10, Transcription initiation factor TFIID subunit 12, Transcription initiation factor TFIID subunit 4, ...
著者Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7NE9
DownloadVisualize
BU of 7ne9 by Molmil
A single sensor controls large variations in zinc quotas in a marine cyanobacterium
分子名称: ACETATE ION, Ferric uptake regulator family, ZINC ION
著者Fulop, V.
登録日2021-02-03
公開日2022-03-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A single sensor controls large variations in zinc quotas in a marine cyanobacterium.
Nat.Chem.Biol., 18, 2022
7D80
DownloadVisualize
BU of 7d80 by Molmil
Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Akbar, S, Bhakta, S, Sengupta, J.
登録日2020-10-06
公開日2021-04-07
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insights into the interplay of protein biogenesis factors with the 70S ribosome.
Structure, 29, 2021
7D6Z
DownloadVisualize
BU of 7d6z by Molmil
Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
分子名称: 16S ribosomal rRNA, 23S ribosomal rRNA, 30S ribosomal protein S10, ...
著者Akbar, S, Bhakta, S, Sengupta, J.
登録日2020-10-02
公開日2021-04-07
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into the interplay of protein biogenesis factors with the 70S ribosome.
Structure, 29, 2021
2G7U
DownloadVisualize
BU of 2g7u by Molmil
2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1
分子名称: transcriptional regulator
著者Zheng, H, Skarina, T, Chruszcz, M, Cymborowski, M, Grabowski, M, Onopriyenko, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2006-03-01
公開日2006-04-04
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献2.3 A structure of putative catechol degradative operon regulator from Rhodococcus sp. RHA1
To be Published
8OO2
DownloadVisualize
BU of 8oo2 by Molmil
ChdA complex with amido-chelocardin
分子名称: 2-carboxamido-2-deacetyl-chelocardin, MAGNESIUM ION, Putative transcriptional regulator
著者Koehnke, J, Sikandar, A.
登録日2023-04-04
公開日2023-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Revision of the Absolute Configurations of Chelocardin and Amidochelocardin.
Angew.Chem.Int.Ed.Engl., 62, 2023
8ROZ
DownloadVisualize
BU of 8roz by Molmil
Cryo-EM structure of CDK2-cyclin A in complex with CDC25A
分子名称: Cyclin-A2, Cyclin-dependent kinase 2, M-phase inducer phosphatase 1
著者Rowland, R.J, Noble, M.E.M, Endicott, J.A.
登録日2024-01-12
公開日2024-05-29
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structure of the CDK2-cyclin A-CDC25A complex.
Nat Commun, 15, 2024
6YL1
DownloadVisualize
BU of 6yl1 by Molmil
Cdk2(F80C) with Covalent Adduct TK37 at F80C
分子名称: Cyclin-dependent kinase 2, methyl 4-(cyclopropylmethyl)-1-prop-2-enoyl-2,3-dihydroquinoxaline-6-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2020-04-06
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Multiparameter Kinetic Analysis for Covalent Fragment Optimization by Using Quantitative Irreversible Tethering (qIT).
Chembiochem, 21, 2020

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon