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8UI7
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Cryo-EM map of human clmap-clamp loader ATAD5-RFC-gapped PCNA complex in intermediate state 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ...
著者Wang, F, He, Q, Li, H.
登録日2023-10-10
公開日2024-05-29
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader.
Nat.Struct.Mol.Biol., 2024
8UI6
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X-ray crystal structure of Toxoplasma gondii GalNAc-T3 in complex with UDP-GalNAc, Mn2+, and Muc5AC-3,13
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Glycosyl transferase, MANGANESE (II) ION, ...
著者Kumar, P, Samara, N.L.
登録日2023-10-10
公開日2024-05-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues.
Nat Commun, 15, 2024
8UI2
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T33-ml28 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml28-redesigned-CutA-fold, T33-ml28-redesigned-tandem-BMC-T-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-09
公開日2024-03-06
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 32, 2024
8UI1
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X-ray crystal structure of Toxoplasma gondii GalNAc-T3 at pH 7.3
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glycosyl transferase, ...
著者Kumar, P, Samara, N.L.
登録日2023-10-09
公開日2024-05-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues.
Nat Commun, 15, 2024
8UI0
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Structure of poised transcription complex Pol II-DSIF-NELF - pre-translocated
分子名称: DNA, DNA (38-MER), DNA-directed RNA polymerase II subunit E, ...
著者Vos, S.M, Su, B.G.
登録日2023-10-09
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing.
Mol.Cell, 2024
8UHZ
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X-ray crystal structure of Toxoplasma gondii GalNAc-T3 in complex with Mn2+
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glycosyl transferase, ...
著者Kumar, P, Samara, N.L.
登録日2023-10-09
公開日2024-05-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues.
Nat Commun, 15, 2024
8UHV
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X-ray crystal structure of Toxoplasma gondii Apo GalNAc-T3
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glycosyl transferase
著者Kumar, P, Samara, N.L.
登録日2023-10-09
公開日2024-05-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues.
Nat Commun, 15, 2024
8UHO
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Crystal structure of SARS CoV-2 3CL protease in complex with GSK4365096A
分子名称: 3C-like proteinase nsp5, N-[(benzyloxy)carbonyl]-4-fluoro-L-phenylalanyl-N-[(2S,3Z)-1-[(2S)-oxolan-2-yl]-3-(2-oxooxolan-3-ylidene)propan-2-yl]-L-leucinamide
著者Concha, N.O, Williams, S.P.
登録日2023-10-09
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Exploration of the P1 residue in 3CL protease inhibitors leading to the discovery of a 2-tetrahydrofuran P1 replacement.
Bioorg.Med.Chem., 100, 2024
8UHL
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ATAD2B bromodomain in complex with histone H4 acetylated at lysine 12
分子名称: ATPase family AAA domain-containing protein 2B, Histone H4
著者Phillips, M, Montgomery, C, Nix, J.C, Glass, K.C.
登録日2023-10-09
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Impact of Combinatorial Histone Modifications on Acetyllysine Recognition by the ATAD2 and ATAD2B Bromodomains.
J.Med.Chem., 67, 2024
8UHI
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Structure of the far-red light-absorbing allophycocyanin core expressed during FaRLiP
分子名称: MAGNESIUM ION, RIBULOSE-1,5-DIPHOSPHATE, Ribulose bisphosphate carboxylase large subunit, ...
著者Gisriel, C.J, Bryant, D.A, Brudvig, G.W, Shen, G.
登録日2023-10-09
公開日2024-01-03
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.35 Å)
主引用文献Structure of the antenna complex expressed during far-red light photoacclimation in Synechococcus sp. PCC 7335.
J.Biol.Chem., 300, 2023
8UHG
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Structure of paused transcription complex Pol II-DSIF-NELF - poised post-translocated
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ...
著者Vos, S.M, Su, B.G.
登録日2023-10-09
公開日2024-03-20
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing.
Mol.Cell, 84, 2024
8UHF
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Cryo-EM of Vibrio cholerae toxin co-regulated pilus - asymmetric reconstruction
分子名称: Toxin co-regulated pilin
著者Sonani, R.R, Kundra, S, Craig, L, Egelman, E.H.
登録日2023-10-09
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Tad and toxin-coregulated pilus structures reveal unexpected diversity in bacterial type IV pili.
Proc.Natl.Acad.Sci.USA, 120, 2023
8UHE
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BU of 8uhe by Molmil
Structure of the far-red light-absorbing allophycocyanin core expressed during FaRLiP
分子名称: ApcB2, ApcC, ApcD2, ...
著者Gisriel, C.J, Bryant, D.A, Brudvig, G.W, Shen, G.
登録日2023-10-09
公開日2024-01-03
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Structure of the antenna complex expressed during far-red light photoacclimation in Synechococcus sp. PCC 7335.
J.Biol.Chem., 300, 2023
8UHD
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BU of 8uhd by Molmil
Structure of paused transcription complex Pol II-DSIF-NELF - post-translocated
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
著者Su, B.G, Vos, S.M.
登録日2023-10-08
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing.
Mol.Cell, 2024
8UHB
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BU of 8uhb by Molmil
Cryo-EM Structure of the Ro5256390-bound hTA1-Gs heterotrimer signaling complex
分子名称: (2R,4S)-4-[(2S)-2-phenylbutyl]-1,3-oxazolidin-2-amine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Zilberg, G, Warren, A.L, Parpounas, A.K, Wacker, D.
登録日2023-10-08
公開日2024-01-10
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Molecular basis of human trace amine-associated receptor 1 activation.
Nat Commun, 15, 2024
8UHA
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BU of 8uha by Molmil
Structure of paused transcription complex Pol II-DSIF-NELF - tilted
分子名称: DNA (28-MER), DNA (38-MER), DNA-directed RNA polymerase II subunit E, ...
著者Vos, S.M, Su, B.G.
登録日2023-10-08
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing.
Mol.Cell, 2024
8UH9
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BU of 8uh9 by Molmil
Crystal structure of SARS-CoV-2 main protease E166V mutant in complex with an inhibitor TKB-272
分子名称: (1R,2S,5S)-N-{(1S,2S)-1-(5-fluoro-1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER
著者Bulut, H, Hayashi, H, Kuwata, N, Tsuji, K, Das, D, Tamamura, H, Mitsuya, H.
登録日2023-10-07
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.067 Å)
主引用文献TKB272, an Orally Available SARS-CoV-2-Mpro Inhibitor Containing 5-Fluorobenzothiazole, Potently Blocks SARS-CoV-2 Replication without Ritonavir
To Be Published
8UH8
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BU of 8uh8 by Molmil
Crystal structure of SARS-CoV-2 main protease E166V (Apo structure)
分子名称: ORF1a polyprotein
著者Bulut, H, Hayashi, H, Kuwata, N, Tsuji, K, Das, D, Tamamura, H, Mitsuya, H.
登録日2023-10-07
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献TKB272, an Orally Available SARS-CoV-2-Mpro Inhibitor Containing 5-Fluorobenzothiazole, Potently Blocks SARS-CoV-2 Replication without Ritonavir
To Be Published
8UH7
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BU of 8uh7 by Molmil
Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Primer DNA strand, ...
著者Gee, C.L, Marcus, K, Kelch, B.A, Makino, D.L.
登録日2023-10-07
公開日2023-12-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.628 Å)
主引用文献Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM.
Nat.Struct.Mol.Biol., 31, 2024
8UH5
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Crystal structure of SARS-CoV-2 main protease in complex with an inhibitor TKB-272
分子名称: (1R,2S,5S)-N-{(1S,2S)-1-(5-fluoro-1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER
著者Bulut, H, Hayashi, H, Kuwata, N, Tsuji, K, Das, D, Tamamura, H, Mitsuya, H.
登録日2023-10-06
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献TKB272, an Orally Available SARS-CoV-2-Mpro Inhibitor Containing 5-Fluorobenzothiazole, Potently Blocks SARS-CoV-2 Replication without Ritonavir
To Be Published
8UH4
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Cryo-EM structure of Maize Streak Virus (MSV) - single head Geminivirus
分子名称: Capsid protein, genomic DNA
著者Bennett, A.B, McKenna, R, Mietzsch, M, Hull, J.A.
登録日2023-10-06
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献The Two States of MSV Gemini Capsid Assembly
To Be Published
8UH3
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BU of 8uh3 by Molmil
Serotonin 1E receptor (5-HT1eR)-Gi1 Complex bound with Setiptiline
分子名称: 5-hydroxytryptamine receptor 1E, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Wacker, D, Parpounas, A.K, Warren, A.L, Zilberg, G.
登録日2023-10-06
公開日2024-05-01
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structural insights into the unexpected agonism of tetracyclic antidepressants at serotonin receptors 5-HT 1e R and 5-HT 1F R.
Sci Adv, 10, 2024
8UH2
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Complex of C3b with the inhibitor albicin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Albicin, Complement C3 beta chain, ...
著者Andersen, J.F, Lei, H, Strayer, E, Ribeiro, J.M.
登録日2023-10-06
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献The mechanism of a mosquito salivary inhibitor of the alternative C3 convertase is elucidated through structural analysis of its complex with C3bBb
To Be Published
8UH1
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Crystal structure of T. brucei EIF4E6 in complex with EIF4G5 peptide
分子名称: Eukaryotic translation initiation factor 4E type 6, MIF4G domain-containing protein
著者Guimaraes, B.G, Penteado, R.F.
登録日2023-10-06
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Structural analysis of the Trypanosoma brucei EIF4E6/EIF4G5 complex reveals details of the interaction between unusual eIF4F subunits.
Sci Rep, 14, 2024
8UH0
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SOS2 co-crystal structure with fragment bound (compound 10)
分子名称: 8-hydroxyquinoline-2-carbonitrile, Son of sevenless homolog 2
著者Gunn, R.J, Lawson, J.D.
登録日2023-10-06
公開日2024-01-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography.
J.Med.Chem., 67, 2024

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件を2024-06-26に公開中

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