PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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5H2J	A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 290 ns after photoexcitation 分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ... 著者 Royant, A, Nango, E, Nakane, T, Tanaka, T, Arima, T, Neutze, R, Iwata, S. 登録日 2016-10-15 公開日 2016-12-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A three-dimensional movie of structural changes in bacteriorhodopsin Science, 354, 2016
5H2V	Crystal structure of the karyopherin Kap121p bound to the SUMO protease Ulp1p 分子名称: Importin subunit beta-3, Ubiquitin-like-specific protease 1 著者 Kobayashi, J, Matsuura, Y. 登録日 2016-10-18 公開日 2016-12-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structures of the Karyopherins Kap121p and Kap60p Bound to the Nuclear Pore-Targeting Domain of the SUMO Protease Ulp1p J. Mol. Biol., 429, 2017
5GRG	Crystal structure of dual peptide from EBV in complex with HLA-A*11:01 分子名称: Beta-2-microglobulin, Epstein Barr Virus, Latent Membrane Protein 2 epitope, ... 著者 Tadwal, V.S, Xiao, Z, Ren, E.C. 登録日 2016-08-11 公開日 2017-08-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Dual non-contiguous peptide occupancy of HLA class I evoke antiviral human CD8 T cell response and form neo-epitopes with self-antigens Sci Rep, 7, 2017
3KSB	Detailed structural insight into the DNA cleavage complex of type IIA topoisomerases (re-sealed form) 分子名称: 5'-D(*AP*CP*CP*AP*AP*GP*GP*T*CP*AP*TP*GP*AP*AP*TP*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*GP*TP*AP*AP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*TP*TP*TP*A*CP*GP*TP*GP*CP*AP*TP*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3', DNA topoisomerase 4 subunit A, ... 著者 Laponogov, I, Pan, X.-S, Veselkov, D.A, McAuley, K.E, Fisher, L.M, Sanderson, M.R. 登録日 2009-11-21 公開日 2010-05-05 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural Basis of Gate-DNA Breakage and Resealing by Type II Topoisomerases Plos One, 5, 2010
5H4G	Structure of PIN-domain protein (VapC4 toxin) from Pyrococcus horikoshii determined at 1.77 A resolution 分子名称: Ribonuclease VapC4, ZINC ION 著者 Biswas, A, Hatti, K, Srinivasan, N, Murthy, M.R.N, Sekar, K. 登録日 2016-10-31 公開日 2016-11-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structure determination of contaminant proteins using the MarathonMR procedure J. Struct. Biol., 197, 2017
5H4S	Crystal structure of a rhamnose-binding lectin SUL-I from the toxopneustid sea urchin Toxopneustes pileolus 分子名称: L-rhamnose-binding lectin, PHOSPHATE ION, alpha-L-rhamnopyranose 著者 Unno, H, Hatakeyama, T. 登録日 2016-11-02 公開日 2017-05-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Carbohydrate recognition by the rhamnose-binding lectin SUL-I with a novel three-domain structure isolated from the venom of globiferous pedicellariae of the flower sea urchin Toxopneustes pileolus Protein Sci., 26, 2017
5GRO	Crystal structure of the N-terminal anticodon-binding domain of non-discriminating aspartyl-tRNA synthetase from Helicobacter pylori 分子名称: Aspartate--tRNA(Asp/Asn) ligase, GLYCEROL, IMIDAZOLE, ... 著者 Songsiriritthigul, C, Fuengfuloy, P, Chen, C.-J, Suebka, S, Chuawong, P. 登録日 2016-08-12 公開日 2017-02-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of the N-terminal anticodon-binding domain of the nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori Acta Crystallogr F Struct Biol Commun, 73, 2017
5H57	Ferredoxin III from maize root 分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-3, chloroplastic 著者 Kurisu, G, Hase, T. 登録日 2016-11-04 公開日 2017-02-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the isotype-specific interactions of ferredoxin and ferredoxin: NADP(+) oxidoreductase: an evolutionary switch between photosynthetic and heterotrophic assimilation Photosyn. Res., 134, 2017
5H5G	Staphylococcus aureus FtsZ-GDP in T and R states 分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE 著者 Fujita, J, Harada, R, Maeda, Y, Saito, Y, Mizohata, E, Inoue, T, Shigeta, Y, Matsumura, H. 登録日 2016-11-05 公開日 2017-05-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Identification of the key interactions in structural transition pathway of FtsZ from Staphylococcus aureus J. Struct. Biol., 198, 2017
5GRW	Crystal structure of homo-specific diabody 分子名称: homo-specific diabody protein 著者 Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. 登録日 2016-08-12 公開日 2016-10-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface. Sci Rep, 6, 2016
3KUV	Structural basis of the activity and substrate specificity of the fluoroacetyl-CoA thioesterase FlK - T42S mutant in complex with acetate. 分子名称: ACETATE ION, Fluoroacetyl coenzyme A thioesterase 著者 Dias, M.V.B, Huang, F, Chirgadze, D.Y, Tosin, M, Spiteller, D, Valentine, E.F, Leadlay, P.F, Spencer, J.B, Blundell, T.L. 登録日 2009-11-27 公開日 2010-04-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural basis for the activity and substrate specificity of fluoroacetyl-CoA thioesterase FlK. J.Biol.Chem., 285, 2010
5GSA	EED in complex with an allosteric PRC2 inhibitor 分子名称: Histone-lysine N-methyltransferase EZH2, N-(furan-2-ylmethyl)-8-(4-methylsulfonylphenyl)-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine, Polycomb protein EED 著者 Zhao, K, Zhao, M, Luo, X, Zhang, H. 登録日 2016-08-15 公開日 2017-02-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 An allosteric PRC2 inhibitor targeting the H3K27me3 binding pocket of Nat. Chem. Biol., 13, 2017
5GG4	Crystal structure of USP7 with RNF169 peptide 分子名称: Peptide from E3 ubiquitin-protein ligase RNF169, Ubiquitin carboxyl-terminal hydrolase 7 著者 Jiang, Y, Gong, Q. 登録日 2016-06-15 公開日 2017-03-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Dual-utility NLS drives RNF169-dependent DNA damage responses. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3L35	PIE12 D-peptide against HIV entry 分子名称: GP41 N-PEPTIDE, HIV ENTRY INHIBITOR PIE12 著者 Welch, B.D, Redman, J.S, Paul, S, Whitby, F.G, Weinstock, M.T, Reeves, J.D, Lie, Y.S, Eckert, D.M, Hill, C.P, Root, M.J, Kay, M.S. 登録日 2009-12-16 公開日 2010-11-03 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Design of a potent D-peptide HIV-1 entry inhibitor with a strong barrier to resistance. J.Virol., 84, 2010
3KV4	Structure of PHF8 in complex with histone H3 分子名称: 1,2-ETHANEDIOL, FE (II) ION, Histone H3-like, ... 著者 Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X. 登録日 2009-11-29 公開日 2009-12-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol., 17, 2010
5GGA	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GDP, 8-oxo-GMP and pyrophosphate 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
3L3I	Crystal structure of HLA-B*4402 in complex with the F7A mutant of a self-peptide derived from DPA*0201 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Theodossis, A, Ely, L.K, Rossjohn, J. 登録日 2009-12-17 公開日 2010-03-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Constraints within major histocompatibility complex class I restricted peptides: presentation and consequences for T-cell recognition Proc.Natl.Acad.Sci.USA, 107, 2010
5GSM	Glycoside hydrolase B with product 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... 著者 Watanabe, M, Kamachi, S, Mine, S. 登録日 2016-08-16 公開日 2017-02-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Glycoside hydrolase B with product To Be Published
5GGD	Crystal structure of Mycobacterium smegmatis MutT1 in complex with phosphate and magnesium ions (excess magnesium, II) 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
3KVS	The high resolution structure of C-Phycocyanin from Galdieria Sulphuraria 分子名称: BILIVERDINE IX ALPHA, C-phycocyanin alpha chain, C-phycocyanin beta chain 著者 Fromme, R, Thangaraj, B, Vanselow, C, Fromme, P. 登録日 2009-11-30 公開日 2011-04-13 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 High resolution structure of C-Phycocyanin from Galdieria sulphuraria reveals new insights of the Phycobilisome To be Published
5GTJ	CRYSTAL STRUCTURE OF CATALYTICALLY ACTIVE FORM OF HUMAN DUSP26 分子名称: Dual specificity protein phosphatase 26, PHOSPHATE ION 著者 Won, E.-Y, Kim, S.J, Chi, S.-W. 登録日 2016-08-21 公開日 2016-09-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Insight into the Critical Role of the N-Terminal Region in the Catalytic Activity of Dual-Specificity Phosphatase 26 Plos One, 11, 2016
5GGK	Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with Man-beta-pNP 分子名称: 1,2-ETHANEDIOL, 4-nitrophenyl beta-D-mannopyranoside, DI(HYDROXYETHYL)ETHER, ... 著者 Kuwabara, N, Senda, T, Kato, R. 登録日 2016-06-16 公開日 2016-08-10 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan Proc.Natl.Acad.Sci.USA, 113, 2016
3KWA	Polyamines inhibit carbonic anhydrases 分子名称: Carbonic anhydrase 2, MERCURY (II) ION, SPERMINE, ... 著者 Temperini, C. 登録日 2009-12-01 公開日 2010-07-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Polyamines inhibit carbonic anhydrases by anchoring to the zinc-coordinated water molecule J.Med.Chem., 53, 2010
5GTT	Crystal structure of C. perfringens iota-like enterotoxin CPILE-a 分子名称: 1,2-ETHANEDIOL, Binary enterotoxin of Clostridium perfringens component a 著者 Toniti, W, Yoshida, T, Tsurumura, T, Irikura, D, Tsuge, H. 登録日 2016-08-23 公開日 2017-03-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.011 Å) 主引用文献 Crystal structure and structure-based mutagenesis of actin-specific ADP-ribosylating toxin CPILE-a as novel enterotoxin PLoS ONE, 12, 2017
5GGO	Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GalNac-beta1,3-GlcNAc-beta-pNP 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 著者 Kuwabara, N, Senda, T, Kato, R. 登録日 2016-06-16 公開日 2016-08-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.502 Å) 主引用文献 Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan Proc.Natl.Acad.Sci.USA, 113, 2016

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