PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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8FL6	Human nuclear pre-60S ribosomal subunit (State J1) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.62 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FLD	Human nuclear pre-60S ribosomal subunit (State L1) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
7QTT	Structural organization of a late activated human spliceosome (Baqr, core region) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Cretu, C, Pena, V. 登録日 2022-01-15 公開日 2023-05-10 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of catalytic activation in human splicing. Nature, 617, 2023
3KXS	Crystal structure of HBV capsid mutant dimer (oxy form), strain adyw 分子名称: Capsid protein 著者 Packianathan, C, Katen, S.P, Zlotnick, A. 登録日 2009-12-03 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Conformational changes in the hepatitis B virus core protein are consistent with a role for allostery in virus assembly J.Virol., 84, 2010
7ACO	Crystal structure of E. coli HTH-type transcriptional regulator RcdA in complex with Tris at 1.80 A resolution 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HTH-type transcriptional regulator RcdA 著者 Pietrzyk-Brzezinska, A.J, Cociurovscaia, A. 登録日 2020-09-11 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.798 Å) 主引用文献 Structures of the TetR-like transcription regulator RcdA alone and in complexes with ligands. Proteins, 90, 2022
7ACL	Crystal structure of E. coli HTH-type transcriptional regulator RcdA at 2.05 A resolution 分子名称: DI(HYDROXYETHYL)ETHER, HTH-type transcriptional regulator RcdA 著者 Pietrzyk-Brzezinska, A.J, Cociurovscaia, A. 登録日 2020-09-11 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.049 Å) 主引用文献 Structures of the TetR-like transcription regulator RcdA alone and in complexes with ligands. Proteins, 90, 2022
7ACM	Crystal structure of E. coli HTH-type transcriptional regulator RcdA in complex with TMAO at 1.76 A resolution 分子名称: HTH-type transcriptional regulator RcdA, trimethylamine oxide 著者 Pietrzyk-Brzezinska, A.J, Cociurovscaia, A. 登録日 2020-09-11 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.763 Å) 主引用文献 Structures of the TetR-like transcription regulator RcdA alone and in complexes with ligands. Proteins, 90, 2022
1MFI	CRYSTAL STRUCTURE OF MACROPHAGE MIGRATION INHIBITORY FACTOR COMPLEXED WITH (E)-2-FLUORO-P-HYDROXYCINNAMATE 分子名称: 2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE, PROTEIN (MACROPHAGE MIGRATION INHIBITORY FACTOR) 著者 Taylor, A.B, Johnson Jr, W.H, Czerwinski, R.M, Whitman, C.P, Hackert, M.L. 登録日 1998-08-12 公開日 1999-06-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of macrophage migration inhibitory factor complexed with (E)-2-fluoro-p-hydroxycinnamate at 1.8 A resolution: implications for enzymatic catalysis and inhibition. Biochemistry, 38, 1999
3LWF	Crystal structure of Putative transcriptional regulator (NP_470886.1) from LISTERIA INNOCUA at 2.06 A resolution 分子名称: CHLORIDE ION, Putative transcriptional regulator, SULFATE ION 著者 Joint Center for Structural Genomics (JCSG) 登録日 2010-02-23 公開日 2010-05-12 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Crystal structure of Putative transcriptional regulator (NP_470886.1) from LISTERIA INNOCUA at 2.06 A resolution To be published
3VEP	Crystal structure of SigD4 in complex with its negative regulator RsdA 分子名称: Probable RNA polymerase sigma-D factor, SULFATE ION, Uncharacterized protein Rv3413c/MT3522 著者 Jaiswal, R.K, Gopal, B. 登録日 2012-01-09 公開日 2013-02-13 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of sigma-factor activity by proteolysis Nucleic Acids Res., 41, 2013
5U9F	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Svidritskiy, E, Madireddy, R, Diaz-Avalos, R, Grant, T, Grigorieff, N, Sousa, D, Korostelev, A.A. 登録日 2016-12-16 公開日 2017-03-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mechanism of ribosome rescue by ArfA and RF2. Elife, 6, 2017
5U9G	3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Svidritskiy, E, Madireddy, R, Diaz-Avalos, R, Grant, T, Grigorieff, N, Sousa, D, Korostelev, A.A. 登録日 2016-12-16 公開日 2017-03-22 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mechanism of ribosome rescue by ArfA and RF2. Elife, 6, 2017
6FEC	Human cap-dependent 48S pre-initiation complex 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Schaffitzel, C, Schaffitzel, C. 登録日 2017-12-31 公開日 2018-03-14 最終更新日 2018-10-03 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Structure of a human cap-dependent 48S translation pre-initiation complex. Nucleic Acids Res., 46, 2018
5NDG	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G. 登録日 2017-03-08 公開日 2017-12-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Aminoglycoside interactions and impacts on the eukaryotic ribosome. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NDV	Crystal structure of Paromomycin bound to the yeast 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G. 登録日 2017-03-09 公開日 2017-12-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Aminoglycoside interactions and impacts on the eukaryotic ribosome. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6C23	Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Compact Active State 分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, JARID2-substrate, ... 著者 Kasinath, V, Faini, M, Poepsel, S, Reif, D, Feng, A, Stjepanovic, G, Aebersold, R, Nogales, E. 登録日 2018-01-05 公開日 2018-01-24 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of human PRC2 with its cofactors AEBP2 and JARID2. Science, 359, 2018
8OJ5	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Penchev, I, DaRosa, P.A, Peter, J.J, Kulathu, Y, Becker, T, Beckmann, R, Kopito, R. 登録日 2023-03-23 公開日 2024-02-21 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER. Nature, 627, 2024
5U4I	Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Zeng, F, Chen, Y, Remis, J, Shekhar, M, Phillips, J.C, Tajkhorshid, E, Jin, H. 登録日 2016-12-04 公開日 2017-01-11 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome. Nature, 541, 2017
8FKZ	Human nucleolar pre-60S ribosomal subunit (State G) 分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
6C24	Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Extended Active State 分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, JARID2-substrate, ... 著者 Kasinath, V, Faini, M, Poepsel, S, Reif, D, Feng, A, Stjepanovic, G, Aebersold, R, Nogales, E. 登録日 2018-01-06 公開日 2018-01-24 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structures of human PRC2 with its cofactors AEBP2 and JARID2. Science, 359, 2018
5NDW	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G. 登録日 2017-03-09 公開日 2017-12-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Aminoglycoside interactions and impacts on the eukaryotic ribosome. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8OJ0	60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R. 登録日 2023-03-23 公開日 2024-02-21 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER. Nature, 627, 2024
8OHD	60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R. 登録日 2023-03-21 公開日 2024-02-21 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER. Nature, 627, 2024
8OR0	CAND1-CUL1-RBX1-SKP1-SKP2-CKS1-CDK2 分子名称: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, Cyclin-dependent kinase 2, ... 著者 Shaaban, M, Clapperton, J.A, Ding, S, Maeots, M.E, Enchev, R.I. 登録日 2023-04-12 公開日 2023-06-28 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural and mechanistic insights into the CAND1-mediated SCF substrate receptor exchange. Mol.Cell, 83, 2023
6Z1B	Structure of K52-acetylated RutR in complex with uracil. 分子名称: 1,2-ETHANEDIOL, HTH-type transcriptional regulator RutR, URACIL 著者 Kremer, M, Schulze, S, Lammers, M. 登録日 2020-05-13 公開日 2022-06-01 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structure of K52-acetylated RutR in complex with uracil. To Be Published

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