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6NRD
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BU of 6nrd by Molmil
hTRiC-hPFD Class4
分子名称: Prefoldin subunit 1, Prefoldin subunit 2, Prefoldin subunit 3, ...
著者Gestaut, D.R, Roh, S.H, Ma, B, Pintilie, G, Joachimiak, L.A, Leitner, A, Walzthoeni, T, Aebersold, R, Chiu, W, Frydman, J.
登録日2019-01-23
公開日2019-06-19
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis.
Cell, 177, 2019
5HN0
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BU of 5hn0 by Molmil
Dengue serotype 3 RNA-dependent RNA polymerase bound to compound 4
分子名称: (6-hydroxybiphenyl-3-yl)acetic acid, RNA-directed RNA polymerase NS5, ZINC ION
著者Noble, C.G.
登録日2016-01-17
公開日2016-03-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of Potent Non-Nucleoside Inhibitors of Dengue Viral RNA-Dependent RNA Polymerase from a Fragment Hit Using Structure-Based Drug Design.
J.Med.Chem., 59, 2016
7CRQ
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BU of 7crq by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
分子名称: DNA (168-MER), Histone H2A, Histone H2B, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7CRP
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BU of 7crp by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (1:1 binding mode)
分子名称: DNA (168-MER), Histone H2A, Histone H2B, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7K79
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BU of 7k79 by Molmil
CBF3
分子名称: Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, Suppressor of kinetochore protein 1
著者Ruifang, G, Yawen, B.
登録日2020-09-22
公開日2021-03-31
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
4L4Y
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BU of 4l4y by Molmil
Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
分子名称: Transcriptional regulator LsrR
著者Ryu, K.S, Ha, J.H, Eo, Y.
登録日2013-06-10
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition.
J.Am.Chem.Soc., 135, 2013
4L4Z
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BU of 4l4z by Molmil
Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
分子名称: (2S)-2,3,3-trihydroxy-4-oxopentyl dihydrogen phosphate, Transcriptional regulator LsrR
著者Ryu, K.S, Ha, J.H, Eo, Y.
登録日2013-06-10
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition.
J.Am.Chem.Soc., 135, 2013
4L50
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BU of 4l50 by Molmil
Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
分子名称: (2S)-2,3,3-trihydroxy-6-methyl-4-oxoheptyl dihydrogen phosphate, Transcriptional regulator LsrR
著者Ryu, K.S, Ha, J.H, Eo, Y.
登録日2013-06-10
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition.
J.Am.Chem.Soc., 135, 2013
4L5I
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BU of 4l5i by Molmil
Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
分子名称: Transcriptional regulator LsrR
著者Ryu, K.S, Ha, J.H, Eo, Y.
登録日2013-06-11
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition.
J.Am.Chem.Soc., 135, 2013
9NB9
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BU of 9nb9 by Molmil
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Reineke, L.C, Dalwadi, U, Croll, T, Arthur, C, Lee, D.J, Frost, A, Costa-Mattioli, M.
登録日2025-02-13
公開日2025-07-09
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Harnessing the Evolution of Proteostasis Networks to Reverse Cognitive Dysfunction.
Biorxiv, 2025
5H83
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BU of 5h83 by Molmil
HETEROYOHIMBINE SYNTHASE HYS FROM CATHARANTHUS ROSEUS - APO FORM
分子名称: ZINC ION, heteroyohimbine synthase HYS
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-23
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
9CG9
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BU of 9cg9 by Molmil
Cryo-EM structure of an HMGB1 box bound to nucleosome at SHL-2
分子名称: High mobility group protein B1, Histone H2A type 1, Histone H2B, ...
著者Chio, U.S, Saunders, H.S, Narlikar, G.J, Cheng, Y.
登録日2024-06-28
公開日2025-07-02
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Competition between HMGB1 and H1 on nucleosomes tunes dynamics within condensed chromatin
To Be Published
5X22
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BU of 5x22 by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Zhang, Y, Ebright, R.
登録日2017-01-29
公開日2017-07-05
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Antibacterial Nucleoside-Analog Inhibitor of Bacterial RNA Polymerase.
Cell, 169, 2017
5J7J
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BU of 5j7j by Molmil
NMR Derived Structure of Ca2+ Calmodulin bound to Phosphorylated PSD-95
分子名称: CALCIUM ION, Calmodulin, Disks large homolog 4
著者Turner, M.L, Ames, J.B, Anderson, D.E.
登録日2016-04-06
公開日2017-10-25
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Ca2+/calmodulin binding to PSD-95 mediates homeostatic synaptic scaling down.
Embo J., 37, 2018
2ZY9
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BU of 2zy9 by Molmil
Improved crystal structure of magnesium transporter MgtE
分子名称: MAGNESIUM ION, Mg2+ transporter MgtE
著者Nureki, O, Ishitani, R, Hattori, M.
登録日2009-01-19
公開日2009-12-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Mg(2+)-dependent gating of bacterial MgtE channel underlies Mg(2+) homeostasis
Embo J., 28, 2009
7BWD
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BU of 7bwd by Molmil
Structure of Dot1L-H2BK34ub Nucleosome Complex
分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
著者Lou, Z.Y, Liu, L, Cao, L, Ai, H.S, Sun, Z.X.
登録日2020-04-14
公開日2021-04-14
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (4.32 Å)
主引用文献Structure of the Dot1L-H2BK34ub Nucleosome Complex Reveals an Unprecedented Crosstalk Activation Mechanism through Nucleosome Shape Distortion
To Be Published
6HYI
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BU of 6hyi by Molmil
Regulatory subunit of a cAMP-independent protein kinase A from Trypanosoma cruzi at 1.4 A resolution in complex with inosine
分子名称: INOSINE, Protein kinase A regulatory subunit
著者Volpato Santos, Y, Lorentzen, E, Basquin, J, Boshart, M.
登録日2018-10-22
公開日2019-11-13
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.39944851 Å)
主引用文献Purine nucleosides replace cAMP in allosteric regulation of PKA in trypanosomatid pathogens.
Elife, 12, 2024
5H82
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BU of 5h82 by Molmil
HETEROYOHIMBINE SYNTHASE THAS2 FROM CATHARANTHUS ROSEUS - APO FORM
分子名称: ZINC ION, heteroyohimbine synthase THAS2
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-23
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
7QP3
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BU of 7qp3 by Molmil
Pseudogymnoascus pannorum M36 protease without the propeptide
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wilkens, C, Qiu, J, Meyer, A.S, Morth, J.P.
登録日2021-12-30
公開日2023-01-18
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Phaeosphaeria nodorum M36 protease without the propeptide
To Be Published
5H81
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BU of 5h81 by Molmil
HETEROYOHIMBINE SYNTHASE THAS2 FROM CATHARANTHUS ROSEUS - COMPLEX WITH NADP+
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ZINC ION, heteroyohimbine synthase THAS2
著者Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
登録日2015-12-23
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
1F6T
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BU of 1f6t by Molmil
STRUCTURE OF THE NUCLEOSIDE DIPHOSPHATE KINASE/ALPHA-BORANO(RP)-TDP.MG COMPLEX
分子名称: 2*-DEOXY-THYMIDINE-5*-ALPHA BORANO DIPHOSPHATE (ISOMER RP), MAGNESIUM ION, PROTEIN (NUCLEOSIDE DIPHOSPHATE KINASE)
著者Guerreiro, C, Boretto, J, Janin, J, Veron, M, Canard, B, Schneider, B, Sarfati, S, Deville-Bonne, D.
登録日2000-06-23
公開日2000-09-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for activation of alpha-boranophosphate nucleotide analogues targeting drug-resistant reverse transcriptase.
EMBO J., 19, 2000
5HHK
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BU of 5hhk by Molmil
Reverse transcriptase domain of group II intron maturase from Roseburia intestinalis in P21 space group (Se-MET)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, PHOSPHATE ION, ...
著者Zhao, C, Pyle, A.M.
登録日2016-01-11
公開日2016-05-04
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution.
Nat.Struct.Mol.Biol., 23, 2016
9B2S
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BU of 9b2s by Molmil
Haspin bound to nucleosome in position 1
分子名称: 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2024-03-16
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Haspin binds to nucleosomes using a unique DNA binding mechanism
To be published
9B2T
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BU of 9b2t by Molmil
Haspin bound to nucleosome in position 2
分子名称: 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2024-03-16
公開日2025-01-22
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Haspin binds to nucleosomes using a unique DNA binding mechanism
To be published
8VH5
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BU of 8vh5 by Molmil
Cryo-EM structure of Rab12-LRRK2 complex in the LRRK2 dimer state
分子名称: GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2, MAGNESIUM ION, ...
著者Zhu, H, Sun, J.
登録日2023-12-30
公開日2024-10-09
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献RAB12-LRRK2 complex suppresses primary ciliogenesis and regulates centrosome homeostasis in astrocytes.
Nat Commun, 15, 2024

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件を2025-07-16に公開中

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