PDB: 215 件ウェブページステータス検索Chemie searchBIRD

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7RGA	Crystal structure of nanoCLAMP3:VHH in complex with MTX 分子名称: METHOTREXATE, SODIUM ION, nano CLostridial Antibody Mimetic Protein 3 VHH 著者 Guo, Z, Alexandrov, K. 登録日 2021-07-14 公開日 2022-05-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Design of a methotrexate-controlled chemical dimerization system and its use in bio-electronic devices. Nat Commun, 12, 2021
7P5U	Neuropilin-b1 in a complex with a VEGFB-derived peptide 分子名称: MGC0122, Neuropilin-1 著者 Fotinou, C, Rhana, R, Yelland, T. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Neuropilin-b1 in a complex with a VEGFB-derived peptide To Be Published
7NSN	Multi-domain GH92 alpha-1,2-mannosidase from Neobacillus novalis: mannoimidazole complex 分子名称: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ... 著者 Kolaczkowski, B.M, Moroz, O.V, Blagova, E, Davies, G.J, Wilson, K.S, Moeler, M.S, Meyer, A.S, Westh, P, Jensen, K, Krogh, K.B.R.M. 登録日 2021-03-08 公開日 2022-09-21 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structural and functional characterization of a multi-domain GH92 alpha-1,2-mannosidase from Neobacillus novalis. Acta Crystallogr D Struct Biol, 79, 2023
7W12	Complex structure of alginate lyase AlyB-OU02 with G9 分子名称: Alginate lyase, SULFATE ION, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid 著者 Liu, W.Z, Lyu, Q.Q, Zhang, K.K. 登録日 2021-11-19 公開日 2022-11-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements. Commun Biol, 5, 2022
7WDT	6-sulfo-beta-D-N-acetylglucosaminidase from Bifidobacterium bifidum in complex with GlcNAc-6S 分子名称: 2-acetamido-2-deoxy-6-O-sulfo-alpha-D-glucopyranose, 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose, Beta-N-acetylhexosaminidase, ... 著者 Yamada, C, Kashima, T, Fushinobu, S, Katoh, T, Katayama, T. 登録日 2021-12-22 公開日 2022-12-28 最終更新日 2023-06-14 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 A bacterial sulfoglycosidase highlights mucin O-glycan breakdown in the gut ecosystem. Nat.Chem.Biol., 19, 2023
7WDU	6-sulfo-beta-D-N-acetylglucosaminidase from Bifidobacterium bifidum in complex with PUGNAc-6S 分子名称: Beta-N-acetylhexosaminidase, CALCIUM ION, [[(3R,4R,5S,6R)-3-acetamido-4,5-bis(oxidanyl)-6-(sulfooxymethyl)oxan-2-ylidene]amino] N-phenylcarbamate 著者 Kashima, T, Yamada, C, Fushinobu, S, Katoh, T, Katayama, T. 登録日 2021-12-22 公開日 2022-12-28 最終更新日 2023-06-14 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 A bacterial sulfoglycosidase highlights mucin O-glycan breakdown in the gut ecosystem. Nat.Chem.Biol., 19, 2023
8AYR	Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota 分子名称: CALCIUM ION, Coagulation factor 5/8 type domain protein 著者 Sakanaka, H, Nielsen, T.S, Pichler, M.J, Nordberg Karlsson, E, Abou Hachem, M, Morth, J.P. 登録日 2022-09-02 公開日 2023-03-01 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria. Nat Commun, 14, 2023
8FDG	Cryo-EM structure of coagulation factor V short 分子名称: Coagulation factor V 著者 Mohammed, B.M, Pelc, L.A, Rau, M.J, Di Cera, E. 登録日 2022-12-03 公開日 2023-03-15 最終更新日 2023-07-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of coagulation factor V short. Blood, 141, 2023
8G6I	Coagulation factor VIII bound to a patient-derived anti-C1 domain antibody inhibitor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor VIII chimera from human and pig, NB33 heavy chain, ... 著者 Childers, K.C, Davulcu, O, Haynes, R.M, Lollar, P, Doering, C.B, Coxon, C.H, Spiegel, P.C. 登録日 2023-02-15 公開日 2023-05-24 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (4.23 Å) 主引用文献 Structure of coagulation factor VIII bound to a patient-derived anti-C1 domain antibody inhibitor. Blood, 142, 2023
8IVW	Crystal structure of NRP2 in complex with aNRP2-10 Fab fragment 分子名称: Heavy chian of antibody 10V8 Fab fragment, Light chain of antibody 10V8 Fab fragment, Neuropilin-2 著者 Geng, Y, Zhai, L. 登録日 2023-03-29 公開日 2023-07-12 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.205 Å) 主引用文献 Inhibition of VEGF binding to neuropilin-2 enhances chemosensitivity and inhibits metastasis in triple-negative breast cancer. Sci Transl Med, 15, 2023
8IVX	Crystal structure of NRP2 in complex with aNRP2-14 Fab fragment 分子名称: 1,2-ETHANEDIOL, Heavy chain of antibody 14V4 Fab fragment, Light chain of antibody 14V4 Fab fragment, ... 著者 Geng, Y, Zhai, L. 登録日 2023-03-29 公開日 2023-07-12 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Inhibition of VEGF binding to neuropilin-2 enhances chemosensitivity and inhibits metastasis in triple-negative breast cancer. Sci Transl Med, 15, 2023
8PFE	Crystal Structure of an Hexavariant of the b1 Domain of Human Neuropilin-1 in Complex with the KDKPPR Peptide 分子名称: ACETATE ION, LYS-ASP-LYS-PRO-PRO-ARG, Neuropilin-1 著者 Jelsch, C, Favier, F, Didierjean, C. 登録日 2023-06-15 公開日 2023-08-02 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 New Crystal Form of Human Neuropilin-1 b1 Fragment with Six Electrostatic Mutations Complexed with KDKPPR Peptide Ligand. Molecules, 28, 2023
8TY1	Cryo-EM structure of coagulation factor VIII bound to NB2E9 分子名称: Coagulation factor VIII, NB2E9 heavy chain, NB2E9 light chain, ... 著者 Childers, K.C, Spiegel, P.C. 登録日 2023-08-24 公開日 2023-09-13 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Structural basis for inhibition of coagulation factor VIII reveals a shared immunogenic hot-spot on the C1 domain To Be Published
8TN9	Structural architecture of the acidic region of the B domain of coagulation factor V 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor V 著者 Mohammed, B.M, Basore, K, Summers, B, Pelc, L.A, Di Cera, E. 登録日 2023-08-01 公開日 2023-10-04 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 Structural architecture of the acidic region of the B domain of coagulation factor V. J.Thromb.Haemost., 22, 2024
8C5G	Structure of human Neuropilin-1 b1b2 domains in complex with Chlorotoxin (Leiurus quinquestriatus) 分子名称: Chlorotoxin, Neuropilin-1 著者 Boros, E, Ecsedi, P, Szakacs, D, Nyitray, L. 登録日 2023-01-09 公開日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of human Neuropilin-1 b1b2 domains in complex with Chlorotoxin (Leiurus quinquestriatus) To Be Published

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