7WDU

6-sulfo-beta-D-N-acetylglucosaminidase from Bifidobacterium bifidum in complex with PUGNAc-6S

Summary for 7WDU

Entry DOI	10.2210/pdb7wdu/pdb
Descriptor	Beta-N-acetylhexosaminidase, [[(3R,4R,5S,6R)-3-acetamido-4,5-bis(oxidanyl)-6-(sulfooxymethyl)oxan-2-ylidene]amino] N-phenylcarbamate, CALCIUM ION, ... (4 entities in total)
Functional Keywords	glycoside hydrolase family 20, hydrolase
Biological source	Bifidobacterium bifidum JCM 1254
Total number of polymer chains	1
Total formula weight	90685.12
Authors	Kashima, T.,Yamada, C.,Fushinobu, S.,Katoh, T.,Katayama, T. (deposition date: 2021-12-22, release date: 2022-12-28, Last modification date: 2023-06-14)
Primary citation	Katoh, T.,Yamada, C.,Wallace, M.D.,Yoshida, A.,Gotoh, A.,Arai, M.,Maeshibu, T.,Kashima, T.,Hagenbeek, A.,Ojima, M.N.,Takada, H.,Sakanaka, M.,Shimizu, H.,Nishiyama, K.,Ashida, H.,Hirose, J.,Suarez-Diez, M.,Nishiyama, M.,Kimura, I.,Stubbs, K.A.,Fushinobu, S.,Katayama, T. A bacterial sulfoglycosidase highlights mucin O-glycan breakdown in the gut ecosystem. Nat.Chem.Biol., 19:778-789, 2023 Cited by PubMed: 36864192 DOI: 10.1038/s41589-023-01272-y PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (2.23 Å)

Structure validation