PDB: 934 件ウェブページステータス検索Chemie searchBIRD

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8ETI	Fkbp39 associated 60S nascent ribosome State 1 分子名称: 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ... 著者 Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M. 登録日 2022-10-17 公開日 2022-11-30 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022
8ETG	Fkbp39 associated 60S nascent ribosome State 3 分子名称: 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ... 著者 Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M. 登録日 2022-10-17 公開日 2022-11-30 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022
7Q8A	Crystal structure of tandem domain RRM1-2 of FUBP-interacting repressor (FIR) bound to FUSE ssDNA fragment 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*GP*T)-3'), Poly(U)-binding-splicing factor PUF60, ... 著者 Ni, X, Joerger, A.C, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2021-11-10 公開日 2022-11-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of tandem domain RRM1-2 of FIR bound to FUSE ssDNA fragment To Be Published
8B8S	Solution structure of tandem RRM1 and RRM2 domains of yeast NPL3 分子名称: Serine/arginine (SR)-type shuttling mRNA binding protein NPL3 著者 Kachariya, N, Sattler, M, Keil, P, Strasser, K. 登録日 2022-10-04 公開日 2022-11-09 最終更新日 2024-06-19 実験手法 SOLUTION NMR, SOLUTION SCATTERING 主引用文献 Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA. Nucleic Acids Res., 51, 2023
7R6Q	State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model 分子名称: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ... 著者 Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. 登録日 2021-06-23 公開日 2022-11-09 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7R7A	State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model 分子名称: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ... 著者 Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. 登録日 2021-06-24 公開日 2022-11-09 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7NAC	State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model 分子名称: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ... 著者 Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. 登録日 2021-06-21 公開日 2022-11-09 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7Z3X	Crystal structure of FIR RRM1-2 Y115F mutant bound to FUSE ssDNA 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*T)-3'), DNA (5'-D(P*GP*TP*())-3'), ... 著者 Ni, X, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2022-03-02 公開日 2022-11-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of FIR RRM1-2 Y115F mutant bound to FUSE ssDNA To Be Published
7VSJ	Crystal structure of MmIMP3-RRM12 in complex with 9-mer RNA 分子名称: Insulin-like growth factor 2 mRNA-binding protein 3, RNA (9-mer) 著者 Li, X.J, Wu, B.X. 登録日 2021-10-26 公開日 2022-11-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Crystal structure of MmIMP3-RRM12 in complex with 9-mer RNA To Be Published
7QR4	human CPEB3 HDV-like ribozyme 分子名称: RNA CPEB3 ribozyme, U1 small nuclear ribonucleoprotein A 著者 Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. 登録日 2022-01-17 公開日 2022-10-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
7QDD	NMR structure of Npl3 RRM1 bound to the AUCCAA RNA 分子名称: Nucleolar protein 3, RNA (5'-R(*AP*UP*CP*CP*AP*A)-3') 著者 Clery, A, Allain, F.H.-T, Moursy, A. 登録日 2021-11-26 公開日 2022-10-26 最終更新日 2024-01-10 実験手法 SOLUTION NMR 主引用文献 RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing. Nat Commun, 14, 2023
7QR3	Chimpanzee CPEB3 HDV-like ribozyme 分子名称: GLYCEROL, POTASSIUM ION, U1 small nuclear ribonucleoprotein A, ... 著者 Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. 登録日 2022-01-10 公開日 2022-10-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
7VRL	Solution structure of Rbfox RRM bound to a non-cognate RNA 分子名称: RNA (5'-R(*UP*GP*CP*AP*UP*AP*U)-3'), RNA binding protein fox-1 homolog 1 著者 Yang, F, Varani, G. 登録日 2021-10-23 公開日 2022-10-26 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Two distinct binding modes provide the RNA-binding protein RbFox with extraordinary sequence specificity. Nat Commun, 14, 2023
7SP0	Crystal structure of human SFPQ L534I mutant in complex with zinc 分子名称: Splicing factor, proline- and glutamine-rich, ZINC ION 著者 Lee, M. 登録日 2021-11-01 公開日 2022-10-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Familial ALS-associated SFPQ variants promote the formation of SFPQ cytoplasmic aggregates in primary neurons. Open Biology, 12, 2022
7UJ1	Crystal structure of PSF-RNA complex 分子名称: RNA (30-MER), Splicing factor, proline- and glutamine-rich 著者 Sachpatzidis, A, Wang, J, Konigsberg, W.H. 登録日 2022-03-30 公開日 2022-09-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Insight into the Tumor Suppression Mechanism from the Structure of Human Polypyrimidine Splicing Factor (PSF/SFPQ) Complexed with a 30mer RNA from Murine Virus-like 30S Transcript-1. Biochemistry, 61, 2022
7UK1	Complex Structure of Human Polypyrimidine Splicing Factor (PSF/SFPQ) with Murine Virus-like 30S Transcript-1 (VS30-1) Reveals Cooperative Binding of RNA 分子名称: MAGNESIUM ION, Splicing factor, proline- and glutamine-rich 著者 Lomakin, I.B, Wang, J. 登録日 2022-03-31 公開日 2022-09-21 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Insight into the Tumor Suppression Mechanism from the Structure of Human Polypyrimidine Splicing Factor (PSF/SFPQ) Complexed with a 30mer RNA from Murine Virus-like 30S Transcript-1. Biochemistry, 61, 2022
7PDV	Crystal structure of RBM5 RRM1-zinc finger in complex with RNA 分子名称: RNA (5'-R(P*UP*GP*GP*CP*UP*CP*UP*UP*CP*U)-3'), RNA binding motif protein 5 isoform 1, ZINC ION 著者 Soni, K, Jagtap, P.K.A, Sattler, M. 登録日 2021-08-08 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Structural basis for specific RNA recognition by the alternative splicing factor RBM5. Nat Commun, 14, 2023
7PCV	Crystal structure of RBM5 RRM1-zinc finger 分子名称: RNA-binding protein 5, ZINC ION 著者 Soni, K, Jagtap, P.K.A, Sattler, M. 登録日 2021-08-04 公開日 2022-08-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Structural basis for specific RNA recognition by the alternative splicing factor RBM5. Nat Commun, 14, 2023
7EVO	The cryo-EM structure of the human 17S U2 snRNP 分子名称: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, RNA helicase, ... 著者 Zhang, X, Zhan, X, Shi, Y. 登録日 2021-05-21 公開日 2022-08-03 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structural insights into branch site proofreading by human spliceosome. Nat.Struct.Mol.Biol., 2024
7SN6	U2AF65 UHM BOUND TO SF3B155 ULM5 分子名称: ISOPROPYL ALCOHOL, Splicing factor 3B subunit 1, Splicing factor U2AF 65 kDa subunit 著者 Loerch, S, Jenkins, J.L, Kielkopf, C.L. 登録日 2021-10-27 公開日 2022-07-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A UHM-ULM interface with unusual structural features contributes to U2AF2 and SF3B1 association for pre-mRNA splicing. J.Biol.Chem., 298, 2022
7UY6	Tetrahymena telomerase at 2.9 Angstrom resolution 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 He, Y, Song, H, Chan, H, Wang, Y, Liu, B, Susac, L, Zhou, Z.H, Feigon, J. 登録日 2022-05-06 公開日 2022-07-13 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structure of Tetrahymena telomerase-bound CST with polymerase alpha-primase. Nature, 608, 2022
7UY5	Tetrahymena telomerase with CST 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 He, Y, Song, H, Chan, H, Wang, Y, Liu, B, Susac, L, Zhou, Z.H, Feigon, J. 登録日 2022-05-06 公開日 2022-07-13 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of Tetrahymena telomerase-bound CST with polymerase alpha-primase. Nature, 608, 2022
7QZP	Identification and characterization of an RRM-containing, ELAV-like, RNA binding protein in Acinetobacter Baumannii 分子名称: Hypothetical RNA binding protein from Acinetobacter baumannii 著者 Ciani, C, Perez-Rafols, A, Bonomo, I, Micaelli, M, Esposito, A, Zucal, C, Belli, R, D'Agostino, V.G, Bianconi, I, Calderone, V, Cerofolini, L, Fragai, M, Provenzani, A. 登録日 2022-01-31 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Identification and Characterization of an RRM-Containing, RNA Binding Protein in Acinetobacter baumannii . Biomolecules, 12, 2022
7WM3	hnRNP A2/B1 RRMs in complex with single-stranded DNA 分子名称: DNA (5'-D(P*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), Heterogeneous nuclear ribonucleoproteins A2/B1 著者 Abula, A, Liu, Y, Guo, H, Li, T, Ji, X. 登録日 2022-01-14 公開日 2022-06-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Structural Insight Into hnRNP A2/B1 Homodimerization and DNA Recognition. J.Mol.Biol., 435, 2022
7W59	The cryo-EM structure of human pre-C*-I complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022

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