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2K1K
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NMR structures of dimeric transmembrane domain of the receptor tyrosine kinase EphA1 in lipid bicelles at pH 4.3
分子名称: Ephrin type-A receptor 1
著者Mayzel, M.L, Bocharov, E.V, Arseniev, A.S, Goncharuk, M.V.
登録日2008-03-06
公開日2008-09-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1
J.Biol.Chem., 283, 2008
5MTE
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BU of 5mte by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T in complex with actinonin - crystal form II
分子名称: ACTINONIN, NICKEL (II) ION, Putative uncharacterized protein orf60T, ...
著者Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
登録日2017-01-09
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Peptide deformylases from Vibrio parahaemolyticus phage and bacteria display similar deformylase activity and inhibitor binding clefts.
Biochim. Biophys. Acta, 1866, 2018
2JP9
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BU of 2jp9 by Molmil
Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
分子名称: DNA (5'-D(P*DCP*DGP*DCP*DGP*DGP*DGP*DGP*DGP*DCP*DGP*DTP*DCP*DTP*DGP*DCP*DGP*DC)-3'), DNA (5'-D(P*DGP*DCP*DGP*DCP*DAP*DGP*DAP*DCP*DGP*DCP*DCP*DCP*DCP*DCP*DGP*DCP*DG)-3'), Wilms tumor 1, ...
著者Stoll, R, Lee, B.M, Debler, E.W, Laity, J.H, Wilson, I.A, Dyson, H.J, Wright, P.E.
登録日2007-04-30
公開日2007-10-30
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structure of the wilms tumor suppressor protein zinc finger domain bound to DNA
J.Mol.Biol., 372, 2007
3U9Q
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BU of 3u9q by Molmil
Ligand binding domain of PPARgamma complexed with Decanoic Acid and PGC-1a peptide
分子名称: DECANOIC ACID, PGC-1a peptide, Peroxisome proliferator-activated receptor gamma
著者Malapaka, V.R, Xu, H.E.
登録日2011-10-19
公開日2011-11-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.522 Å)
主引用文献Identification and Mechanism of 10-Carbon Fatty Acid as Modulating Ligand of Peroxisome Proliferator-activated Receptors.
J.Biol.Chem., 287, 2012
1E4A
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BU of 1e4a by Molmil
L-Fuculose 1-Phosphate Aldolase from Escherichia coli Mutant Del(27)
分子名称: BETA-MERCAPTOETHANOL, L-FUCULOSE 1-PHOSPHATE ALDOLASE, SULFATE ION, ...
著者Joerger, A.C, Schulz, G.E.
登録日2000-06-30
公開日2000-11-06
最終更新日2019-01-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of L-Fuculose-1-Phosphate Aldolase Mutants Outlining Motions During Catalysis
J.Mol.Biol., 303, 2000
5MVQ
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BU of 5mvq by Molmil
Crystal structure of an unmodified, self-complementary dodecamer.
分子名称: DNA, MAGNESIUM ION
著者Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T.
登録日2017-01-17
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.604 Å)
主引用文献5-Formylcytosine does not change the global structure of DNA.
Nat. Struct. Mol. Biol., 24, 2017
3HEI
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BU of 3hei by Molmil
Ligand Recognition by A-Class Eph Receptors: Crystal Structures of the EphA2 Ligand-Binding Domain and the EphA2/ephrin-A1 Complex
分子名称: Ephrin type-A receptor 2, Ephrin-A1
著者Himanen, J.P, Goldgur, Y, Miao, H, Myshkin, E, Guo, H, Buck, M, Nguyen, M, Rajashankar, K.R, Wang, B, Nikolov, D.B.
登録日2009-05-08
公開日2009-06-30
最終更新日2021-03-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ligand recognition by A-class Eph receptors: crystal structures of the EphA2 ligand-binding domain and the EphA2/ephrin-A1 complex.
Embo Rep., 10, 2009
5MWU
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BU of 5mwu by Molmil
Crystal structure of the periplasmic nickel-binding protein NikA from Escherichia coli in complex with Ru(bpza)(CO)2Cl
分子名称: ACETATE ION, CARBON MONOXIDE, CHLORIDE ION, ...
著者Cavazza, C, Lopez, S, Rondot, L, Iannello, M, Boeri-Erba, E, Burzlaff, N, Strinitz, F, Jorge-Robin, A, Marchi-Delapierre, C, Menage, S.
登録日2017-01-20
公開日2017-02-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Efficient conversion of alkenes to chlorohydrins by a Ru-based artificial enzyme
To Be Published
5MXJ
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BU of 5mxj by Molmil
Structure of the Y108F mutant of vanillyl alcohol oxidase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Vanillyl-alcohol oxidase
著者Ewing, T.A, Nguyen, Q.-T, Allan, R.C, Gygli, G, Romero, E, Binda, C, Fraaije, M.W, Mattevi, A, van Berkel, W.J.H.
登録日2017-01-23
公開日2017-07-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Two tyrosine residues, Tyr-108 and Tyr-503, are responsible for the deprotonation of phenolic substrates in vanillyl-alcohol oxidase.
J. Biol. Chem., 292, 2017
2YAK
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BU of 2yak by Molmil
Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV)
分子名称: DEATH-ASSOCIATED PROTEIN KINASE 1, RUTHENIUM OCTASPORINE 4
著者Feng, L, Geisselbrecht, Y, Blanck, S, Wilbuer, A, Atilla-Gokcumen, G.E, Filippakopoulos, P, Kraeling, K, Celik, M.A, Harms, K, Maksimoska, J, Marmorstein, R, Frenking, G, Knapp, S, Essen, L.-O, Meggers, E.
登録日2011-02-23
公開日2011-04-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors.
J.Am.Chem.Soc., 133, 2011
4CL3
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BU of 4cl3 by Molmil
1.70 A resolution structure of the malate dehydrogenase from Chloroflexus aurantiacus
分子名称: ACETATE ION, CADMIUM ION, CHLORIDE ION, ...
著者Talon, R, Madern, D, Girard, E.
登録日2014-01-11
公開日2014-02-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献An Experimental Point of View on Hydration/Solvation in Halophilic Proteins.
Front.Microbiol., 5, 2014
1DSN
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BU of 1dsn by Molmil
D60S N-TERMINAL LOBE HUMAN LACTOFERRIN
分子名称: CARBONATE ION, FE (III) ION, LACTOFERRIN
著者Faber, H.R, Norris, G.E, Baker, E.N.
登録日1995-12-13
公開日1996-03-08
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Altered domain closure and iron binding in transferrins: the crystal structure of the Asp60Ser mutant of the amino-terminal half-molecule of human lactoferrin.
J.Mol.Biol., 256, 1996
5WRA
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BU of 5wra by Molmil
Crystal structure of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Sugahara, M, Suzuki, M, Masuda, T, Inoue, S, Nango, E.
登録日2016-12-01
公開日2017-12-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
4N0C
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BU of 4n0c by Molmil
42F3 TCR pCPE3/H-2Ld complex
分子名称: 42F3 VmCh alpha, 42F3 VmCh beta, H-2 class I histocompatibility antigen, ...
著者Birnbaum, M.E, Adams, J.J, Garcia, K.C.
登録日2013-10-01
公開日2015-08-19
最終更新日2018-09-26
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural interplay between germline interactions and adaptive recognition determines the bandwidth of TCR-peptide-MHC cross-reactivity.
Nat. Immunol., 17, 2016
5MQ3
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BU of 5mq3 by Molmil
Structure of AaLS-neg
分子名称: 6,7-dimethyl-8-ribityllumazine synthase
著者Sasaki, E, Boehringer, D, Leibundgut, M, Ban, N, Hilvert, D.
登録日2016-12-20
公開日2017-03-22
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Structure and assembly of scalable porous protein cages.
Nat Commun, 8, 2017
4G4J
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BU of 4g4j by Molmil
Crystal structure of glucuronoyl esterase S213A mutant from Sporotrichum thermophile in complex with methyl 4-O-methyl-beta-D-glucopyranuronate determined at 2.35 A resolution
分子名称: 1,2-ETHANEDIOL, 4-O-methyl-glucuronoyl methylesterase, GLYCEROL, ...
著者Charavgi, M.D, Dimarogona, M, Topakas, E, Christakopoulos, P, Chrysina, E.D.
登録日2012-07-16
公開日2013-01-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The structure of a novel glucuronoyl esterase from Myceliophthora thermophila gives new insights into its role as a potential biocatalyst.
Acta Crystallogr.,Sect.D, 69, 2013
2Y75
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BU of 2y75 by Molmil
The Structure of CymR (YrzC) the Global Cysteine Regulator of B. subtilis
分子名称: CHLORIDE ION, HTH-TYPE TRANSCRIPTIONAL REGULATOR CYMR, SULFATE ION
著者Shepard, W, Soutourina, O, Courtois, E, England, P, Haouz, A, Martin-Verstraete, I.
登録日2011-01-28
公開日2011-08-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights Into the Rrf2 Repressor Family - the Structure of Cymr, the Global Cysteine Regulator of Bacillus Subtilis.
FEBS J., 278, 2011
4AON
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BU of 4aon by Molmil
Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex
分子名称: ASPARTATE-ALPHA-DECARBOXYLASE ALPHA CHAIN, ASPARTATE-ALPHA-DECARBOXYLASE BETA CHAIN, GLUTAMIC ACID
著者Yorke, B.A, Monteiro, D.C.F, Pearson, A.R, Webb, M.E.
登録日2012-03-29
公開日2012-10-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational Dynamics of Aspartate Alpha Decarboxylase Active Site Revealed by Protein-Ligand Complexes
To be Published
1Y9G
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BU of 1y9g by Molmil
Crystal structure of exo-inulinase from Aspergillus awamori complexed with fructose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-fructofuranose, ...
著者Nagem, R.A.P, Rojas, A.L, Golubev, A.M, Korneeva, O.S, Eneyskaya, E.V, Kulminskaya, A.A, Neustroev, K.N, Polikarpov, I.
登録日2004-12-15
公開日2004-12-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of exo-inulinase from Aspergillus awamori: the enzyme fold and structural determinants of substrate recognition
J.Mol.Biol., 344, 2004
6CL1
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BU of 6cl1 by Molmil
Caspase-7 in complex with Ac-DW3-KE
分子名称: ACE-1MH-ASP-B3L-PHE-1U8, Caspase-7 subunit p11, Caspase-7 subunit p20
著者Solania, A.T, Gonzalez-Paez, G.E, Wolan, D.W.
登録日2018-03-01
公開日2019-03-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Selective and Rapid Cell-Permeable Inhibitor of Human Caspase-3.
Acs Chem.Biol., 14, 2019
5MVP
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BU of 5mvp by Molmil
Crystal structure of an A-DNA dodecamer containing the GGGCCC motif
分子名称: DNA, POTASSIUM ION
著者Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T.
登録日2017-01-17
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.606 Å)
主引用文献5-Formylcytosine does not change the global structure of DNA.
Nat. Struct. Mol. Biol., 24, 2017
1Y9A
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BU of 1y9a by Molmil
Alcohol Dehydrogenase from Entamoeba histolotica in complex with cacodylate
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CACODYLATE ION, ...
著者Shimon, L.J, Peretz, M, Goihberg, E, Burstein, Y, Frolow, F.
登録日2004-12-15
公開日2006-01-17
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure of alcohol dehydrogenase from Entamoeba histolytica.
Acta Crystallogr.,Sect.D, 62, 2006
4N5B
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BU of 4n5b by Molmil
Crystal structure of the Nipah virus phosphoprotein tetramerization domain
分子名称: IMIDAZOLE, Phosphoprotein
著者Bruhn, J.F, Barnett, K, Bibby, J, Thomas, J, Keegan, R, Rigden, D, Bornholdt, Z.A, Saphire, E.O.
登録日2013-10-09
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the nipah virus phosphoprotein tetramerization domain.
J.Virol., 88, 2014
2Q3Q
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BU of 2q3q by Molmil
Ensemble refinement of the protein crystal structure of At1g24000 from Arabidopsis thaliana
分子名称: Uncharacterized protein At1g24000
著者Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2007-05-30
公開日2007-06-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
4A6X
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RadA C-terminal ATPase domain from Pyrococcus furiosus bound to ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA REPAIR AND RECOMBINATION PROTEIN RADA, MAGNESIUM ION
著者Marsh, M.E, Ehebauer, M.T, Scott, D, Abell, C, Blundell, T.L, Hyvonen, M.
登録日2011-11-10
公開日2012-11-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.548 Å)
主引用文献ATP Half-Sites in Rada and Rad51 Recombinases Bind Nucleotides
FEBS Open Bio, 6, 2016

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