PDB: 48062 件ウェブページステータス検索Chemie searchBIRD

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6JJO	Crystal structure of the DegP dodecamer with a modulator 分子名称: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.157 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy Commun Biol, 3, 2020
6Q19	Inferred intermediate (I-6) of the human antibody lineage 652 分子名称: Fab heavy chain, Fab lambda chain 著者 McCarthy, K.R, Harrison, S.C. 登録日 2019-08-03 公開日 2019-12-18 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Affinity maturation in a human humoral response to influenza hemagglutinin. Proc.Natl.Acad.Sci.USA, 2019
6JKO	Crystal structure of sulfoacetaldehyde reductase from Bifidobacterium kashiwanohense 分子名称: Methanol dehydrogenase, ZINC ION 著者 Zhou, Y, Xu, T, Lin, L, Zhang, Y, Yuchi, Z. 登録日 2019-03-01 公開日 2019-06-12 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Identification and characterization of a new sulfoacetaldehyde reductase from the human gut bacteriumBifidobacterium kashiwanohense. Biosci.Rep., 39, 2019
6Q1J	Antibody H2227 from the human antibody lineage 652 分子名称: Fab heavy chain, Fab lambda light chain 著者 McCarthy, K.R, Harrison, S.C, Raymond, D.D. 登録日 2019-08-05 公開日 2019-12-18 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2.703 Å) 主引用文献 Affinity maturation in a human humoral response to influenza hemagglutinin. Proc.Natl.Acad.Sci.USA, 2019
6JL2	Crystal structure of VvPlpA G389N from Vibrio vulnificus 分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, HEXAETHYLENE GLYCOL, Thermolabile hemolysin 著者 Ma, Q, Wan, Y, Liu, C. 登録日 2019-03-03 公開日 2019-05-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural analysis of aVibriophospholipase reveals an unusual Ser-His-chloride catalytic triad. J.Biol.Chem., 294, 2019
6Q2S	Cryo-EM structure of RET/GFRa3/ARTN extracellular complex. The 3D refinement was applied with C2 symmetry. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF family receptor alpha-3, ... 著者 Li, J, Shang, G.J, Chen, Y.J, Brautigam, C.A, Liou, J, Zhang, X.W, Bai, X.C. 登録日 2019-08-08 公開日 2019-10-02 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Cryo-EM analyses reveal the common mechanism and diversification in the activation of RET by different ligands. Elife, 8, 2019
6JL8	Crystal structure of GMP reductase C318A from Trypanosoma brucei 分子名称: GMP reductase 著者 Mase, H, Imamura, A, Nishimura, S, Inui, T. 登録日 2019-03-04 公開日 2020-03-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.804 Å) 主引用文献 Allosteric regulation accompanied by oligomeric state changes of Trypanosoma brucei GMP reductase through cystathionine-beta-synthase domain. Nat Commun, 11, 2020
4UGY	Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N1-(5-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)-N1,N2- dimethylethane-1,2-diamine 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, CHLORIDE ION, GLYCEROL, ... 著者 Holden, J.K, Poulos, T.L. 登録日 2015-03-22 公開日 2015-06-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.801 Å) 主引用文献 Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry, 54, 2015
6JLG	Crystal Structure of HasAp with Co-9,10,19,20-Tetraphenylporphycene 分子名称: GLYCEROL, Heme acquisition protein HasA, PHOSPHATE ION, ... 著者 Sakakibara, E, Shisaka, Y, Onoda, H, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O. 登録日 2019-03-05 公開日 2020-03-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Highly malleable haem-binding site of the haemoprotein HasA permits stable accommodation of bulky tetraphenylporphycenes. Rsc Adv, 9, 2019
4U4T	Structure of a nitrate/nitrite antiporter NarK in nitrate-bound inward-open state 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, NITRATE ION, Nitrate/nitrite transporter NarK, ... 著者 Fukuda, M, Takeda, H, Kato, H.E, Doki, S, Ito, K, Maturana, A.D, Ishitani, R, Nureki, O. 登録日 2014-07-24 公開日 2015-07-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis for dynamic mechanism of nitrate/nitrite antiport by NarK Nat Commun, 6, 2015
1D8T	CRYSTAL STRUCTURE OF ELONGATION FACTOR, TU (EF-TU-MGGDP) COMPLEXED WITH GE2270A, A THIAZOLYL PEPTIDE ANTIBIOTIC 分子名称: ACETATE ION, ELONGATION FACTOR TU, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Heffron, S.E, Jurnak, F. 登録日 1999-10-25 公開日 2000-10-25 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structure of an EF-TU Complex with a Thiazolyl Peptide Antibiotic Determined at 2.35 A Resolution: Atomic Basis for Ge2270A Inhibition of EF-TU. Biochemistry, 39, 2000
1CWT	HUMAN CDC25B CATALYTIC DOMAIN WITH METHYL MERCURY 分子名称: CDC25 B-TYPE TYROSINE PHOSPHATASE, CHLORIDE ION, METHYL MERCURY ION, ... 著者 Watenpaugh, K.D, Reynolds, R.A. 登録日 1999-08-26 公開日 2000-08-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the catalytic subunit of Cdc25B required for G2/M phase transition of the cell cycle. J.Mol.Biol., 293, 1999
6JMR	CD98hc extracellular domain bound to HBJ127 Fab and MEM-108 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, ... 著者 Lee, Y, Nishizawa, T, Kusakizako, T, Oda, K, Ishitani, R, Yokoyama, T, Nakane, T, Shirouzu, M, Nureki, O. 登録日 2019-03-13 公開日 2019-06-19 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc. Nat.Struct.Mol.Biol., 26, 2019
6Q2O	Cryo-EM structure of RET/GFRa2/NRTN extracellular complex. The 3D refinement was applied with C2 symmetry. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF family receptor alpha-2, ... 著者 Li, J, Shang, G.J, Chen, Y.J, Brautigam, C.A, Liou, J, Zhang, X.W, Bai, X.C. 登録日 2019-08-08 公開日 2019-10-02 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Cryo-EM analyses reveal the common mechanism and diversification in the activation of RET by different ligands. Elife, 8, 2019
4U6B	Zg3597, a family 117 glycoside hydrolase, produced by the marine bacterium Zobellia galactanivorans 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ... 著者 Ficko-Blean, E. 登録日 2014-07-28 公開日 2015-02-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Biochemical and structural investigation of two paralogous glycoside hydrolases from Zobellia galactanivorans: novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family. Acta Crystallogr.,Sect.D, 71, 2015
1CY2	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH TPTPTP3' 分子名称: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE 著者 Feinberg, H, Changela, A, Mondragon, A. 登録日 1999-08-31 公開日 2000-03-08 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
6JSC	Crystal structure of the H434A variant of the C-terminal domain of HtaA from Corynebacterium glutamicum 分子名称: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION 著者 Muraki, N, Aono, S. 登録日 2019-04-08 公開日 2019-11-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria. Chem.Commun.(Camb.), 55, 2019
6JNP	Structure of ExoT-SpcS Complex from Pseudomonas aeruginosa in 2.2 Angstrom 分子名称: CesT family type III secretion system chaperone, Exoenzyme T, GLYCEROL 著者 Datta, S, Mondal, A. 登録日 2019-03-17 公開日 2019-04-03 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.261 Å) 主引用文献 Structure of ExoT-SpcS Complex from Pseudomonas aeruginosa To Be Published
1CO9	RECOMBINANT SPERM WHALE MYOGLOBIN L104V MUTANT (MET) 分子名称: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Liong, E.C, Phillips Jr, G.N. 登録日 1999-06-07 公開日 1999-06-14 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Waterproofing the heme pocket. Role of proximal amino acid side chains in preventing hemin loss from myoglobin. J.Biol.Chem., 276, 2001
4U91	GephE in complex with Para-Phenyl crosslinked Glycine receptor beta subunit derived dimeric peptide 分子名称: 1,1'-benzene-1,4-diylbis(1H-pyrrole-2,5-dione), 1,2-ETHANEDIOL, ACETATE ION, ... 著者 Kasaragod, V.B, Maric, H.M, Schindelin, H. 登録日 2014-08-05 公開日 2014-12-10 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Design and Synthesis of High-Affinity Dimeric Inhibitors Targeting the Interactions between Gephyrin and Inhibitory Neurotransmitter Receptors. Angew.Chem.Int.Ed.Engl., 54, 2015
6Q84	Crystal structure of RanGTP-Pdr6-eIF5A export complex 分子名称: Eukaryotic translation initiation factor 5A-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Aksu, M, Trakhanov, S, Vera-Rodriguez, A, Gorlich, D. 登録日 2018-12-14 公開日 2019-05-01 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Structural basis for the nuclear import and export functions of the biportin Pdr6/Kap122. J.Cell Biol., 218, 2019
6Q8U	Structure of the standard kink turn HmKt-7 variant A2bm6A bound with AfL7Ae protein 分子名称: 50S ribosomal protein L7Ae, RNA (5'-R(*CP*GP*GP*CP*GP*AP*AP*GP*(6MZ)P*AP*CP*CP*GP*GP*GP*GP*AP*GP*CP*CP*G)-3'), SODIUM ION 著者 Huang, L, Lilley, D.M.J. 登録日 2018-12-16 公開日 2019-07-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Effect of methylation of adenine N6on kink turn structure depends on location. Rna Biol., 16, 2019
4U9H	Ultra High Resolution Structure Of The Ni-R State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE3-S4 CLUSTER, ... 著者 Ogata, H, Nishikawa, K, Lubitz, W. 登録日 2014-08-06 公開日 2015-01-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (0.89 Å) 主引用文献 Hydrogens detected by subatomic resolution protein crystallography in a [NiFe] hydrogenase. Nature, 520, 2015
6Q9D	CI Peripheral Arm focused refinement from Ovine respiratory SC I+III2 分子名称: Acyl carrier protein, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-18 公開日 2019-08-21 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
6QAA	Human Butyrylcholinesterase in complex with (S)-2-(butylamino)-N-(2-cycloheptylethyl)-3-(1H-indol-3-yl)propanamide 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Brazzolotto, X, Nachon, F, Harst, M, Knez, D, Gobec, S. 登録日 2018-12-19 公開日 2019-03-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.897 Å) 主引用文献 Tryptophan-derived butyrylcholinesterase inhibitors as promising leads against Alzheimer's disease. Chem.Commun.(Camb.), 55, 2019

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