PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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4YM5	Crystal structure of the human nucleosome containing 6-4PP (inside) 分子名称: 144 mer-DNA, 144-mer DNA, Histone H2A type 1-B/E, ... 著者 Osakabe, A, Tachiwana, H, Kagawa, W, Horikoshi, N, Matsumoto, S, Hasegawa, M, Matsumoto, N, Toga, T, Yamamoto, J, Hanaoka, F, Thoma, N.H, Sugasawa, K, Iwai, S, Kurumizaka, H. 登録日 2015-03-06 公開日 2015-12-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (4.005 Å) 主引用文献 Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome Sci Rep, 5, 2015
1M69	Atomic Resolution Structure of 5Br-9amino-DACA with d[CGTACG]2 分子名称: 5'-D(*CP*GP*TP*AP*CP*G)-3', 5-BROMO-N[2-(DIMETHYLAMINO)ETHYL]-9-AMINOACRIDINE-4-CARBOXAMIDE, SPERMINE 著者 Teixeira, S.C.M, Thorpe, J.H, Todd, A.K, Cardin, C.J. 登録日 2002-07-15 公開日 2003-08-19 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Heavy Going: the Atomic Resolution Structure of a Topoisomerase II Poison Intercalating into DNA in Multiple Orientations Also Reveals a Multiple Adenine-Thymine Hydrogen Bonding Pattern To be Published
4YVJ	Crystal Structure of H. influenzae TrmD in complex with sinefungin and tRNA variant (G36U) 分子名称: SINEFUNGIN, tRNA, tRNA (guanine-N(1)-)-methyltransferase 著者 Yoshida, K, Ito, T, Yokoyama, S. 登録日 2015-03-20 公開日 2015-07-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for methyl-donor-dependent and sequence-specific binding to tRNA substrates by knotted methyltransferase TrmD. Proc.Natl.Acad.Sci.USA, 112, 2015
1M6C	V68N MYOGLOBIN WITH CO 分子名称: CARBON MONOXIDE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE 著者 Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J. 登録日 1998-08-12 公開日 1998-08-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution. Biochemistry, 37, 1998
4YVY	Crystal structure of human carbonic anhydrase II in complex with hydroxylamine-O-sulfonamide, a molecule incorporating two zinc-binding groups. 分子名称: Carbonic anhydrase 2, ZINC ION, amino(aminooxy)sulfane dioxide 著者 Di Fiore, A, De Simone, G. 登録日 2015-03-20 公開日 2016-03-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 A VERSATILE ZINC-BINDING GROUP FOR CARBONIC ANHYDRASE INHIBITORS To Be Published
1M6I	Crystal Structure of Apoptosis Inducing Factor (AIF) 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Programmed cell death protein 8 著者 Ye, H, Cande, C, Stephanou, N.C, Jiang, S, Gurbuxani, S, Larochette, N, Daugas, E, Garrido, C, Kroemer, G, Wu, H. 登録日 2002-07-16 公開日 2002-08-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 DNA binding is required for the apoptogenic action of apoptosis inducing factor. Nat.Struct.Biol., 9, 2002
4YW4	Streptococcus pneumoniae sialidase NanC 分子名称: GLYCEROL, Neuraminidase C, PHOSPHATE ION 著者 Owen, C.D, Lukacik, P, Potter, J.A, Walsh, M, Taylor, G.L. 登録日 2015-03-20 公開日 2016-04-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of a novel sialidase To be published
1M6U	Crystal Structure of a Novel DNA-binding domain from Ndt80, a Transcriptional Activator Required for Meiosis in Yeast 分子名称: Ndt80 protein, SULFATE ION 著者 Montano, S.P, Cote, M.L, Fingerman, I, Pierce, M, Vershon, A.K, Georgiadis, M.M. 登録日 2002-07-17 公開日 2002-11-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the DNA-binding domain from Ndt80, a transcriptional activator required for meiosis in yeast Proc.Natl.Acad.Sci.USA, 99, 2002
4YMR	Crystal structure of the domain swapped PXB/TPR domain of mouse SNX21 分子名称: Protein Snx21 著者 Collins, B.C, Teasdale, R.D, Clairfeuille, T. 登録日 2015-03-07 公開日 2015-04-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure and Membrane Binding Properties of the Endosomal Tetratricopeptide Repeat (TPR) Domain-containing Sorting Nexins SNX20 and SNX21. J.Biol.Chem., 290, 2015
1M74	Crystal structure of Mg-ADP-bound SecA from Bacillus subtilis 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Preprotein translocase secA, ... 著者 Hunt, J.F, Weinkauf, S, Henry, L, Fak, J.J, McNicholas, P, Oliver, D.B, Deisenhofer, J. 登録日 2002-07-16 公開日 2002-09-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Nucleotide Control of Interdomain Interactions in the Conformational Reaction Cycle of SecA Science, 297, 2002
4YWO	Mercuric reductase from Metallosphaera sedula 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Mercuric reductase 著者 Artz, J.H, Zadvornyy, O.A, White, S, Peters, J.W. 登録日 2015-03-20 公開日 2015-09-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Biochemical and Structural Properties of a Thermostable Mercuric Ion Reductase from Metallosphaera sedula. Front Bioeng Biotechnol, 3, 2015
1M7H	Crystal Structure of APS kinase from Penicillium Chrysogenum: Structure with APS soaked out of one dimer 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-PHOSPHOSULFATE, Adenylylsulfate kinase, ... 著者 Lansdon, E.B, Sege, I.H, Fisher, A.J. 登録日 2002-07-19 公開日 2002-11-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Ligand-Induced Structural Changes in Adenosine 5'-Phosphosulfate Kinase from Penicillium chrysogenum. Biochemistry, 41, 2002
4YMY	Crystal structure of mutant nitrobindin M75A/H76L/Q96C/M148L/H158A (NB11) from Arabidopsis thaliana 分子名称: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260 著者 Mizohata, E, Himiyama, T, Tachikawa, K, Oohora, K, Onoda, A, Hayashi, T. 登録日 2015-03-08 公開日 2015-12-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 A Highly Active Biohybrid Catalyst for Olefin Metathesis in Water: Impact of a Hydrophobic Cavity in a beta-Barrel Protein Acs Catalysis, 5, 2015
1M8E	inducible nitric oxide synthase with 7-nitroindazole bound 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-NITROINDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D. 登録日 2002-07-24 公開日 2002-08-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency Biochemistry, 41, 2002
4YWQ	Crystal structure of the ROQ domain of human Roquin-1 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ... 著者 Dong, A, Zhang, Q, Li, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC) 登録日 2015-03-20 公開日 2015-04-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of the ROQ domain of human Roquin-1 To be Published
1M9M	human endothelial nitric oxide synthase with 6-nitroindazole bound 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-NITROINDAZOLE, ISOPROPYL ALCOHOL, ... 著者 Rosenfeld, R.J, Garcin, E.D, Panda, K, Andersson, G, Aberg, A, Wallace, A.V, Stuehr, D.J, Tainer, J.A, Getzoff, E.D. 登録日 2002-07-29 公開日 2002-08-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency Biochemistry, 41, 2002
4YN4	Structure of human DNA polymerase beta complexed with N7BG in the template opposite to incoming non-hydrolyzable dTTP WITH MANGANESE IN THE ACTIVE SITE 分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA 10-mer (up-primer), DNA 16-mer (template), ... 著者 Lee, S, Koag, M.-C. 登録日 2015-03-09 公開日 2016-03-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.243 Å) 主引用文献 Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication. Biochemistry, 2018
1M9Z	CRYSTAL STRUCTURE OF HUMAN TGF-BETA TYPE II RECEPTOR LIGAND BINDING DOMAIN 分子名称: GLYCEROL, TGF-BETA RECEPTOR TYPE II 著者 Boesen, C.C, Radaev, S, Motyka, S.A, Patamawenu, A, Sun, P.D. 登録日 2002-07-30 公開日 2002-09-11 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 THE 1.1A CRYSTAL STRUCTURE OF HUMAN TGF-BETA TYPE II RECEPTOR LIGAND BINDING DOMAIN Structure, 10, 2002
4YWV	Structural insight into the substrate inhibition mechanism of NADP+-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes 分子名称: 4-oxobutanoic acid, SULFATE ION, Succinic semialdehyde dehydrogenase 著者 Park, S.A, Jang, E.H, Chi, Y.M, Lee, K.S. 登録日 2015-03-21 公開日 2015-05-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural insight into the substrate inhibition mechanism of NADP(+)-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes. Biochem.Biophys.Res.Commun., 461, 2015
1MA1	Structure and properties of the atypical iron superoxide dismutase from Methanobacterium thermoautotrophicum 分子名称: FE (III) ION, superoxide dismutase 著者 Adams, J.J, Anderson, B.F, Renault, J.P, Verchere-Beaur, C, Morgenstern-Badarau, I, Jameson, G.B. 登録日 2002-07-31 公開日 2002-08-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure and properties of the atypical iron superoxide dismutase from Methanobacterium thermoautotrophicum To be published
4YX6	Architectural hierarchy of trans-acting enoyl reductases from polyunsaturated fatty acid and trans-AT polyketide synthases 分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, Omega-3 polyunsaturated fatty acid synthase subunit PfaD 著者 Till, M, Race, P.R. 登録日 2015-03-22 公開日 2016-04-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Architectural hierarchy of trans-acting enoyl reductases from polyunsaturated fatty acid and trans-AT polyketide synthases To Be Published
1M90	Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit 分子名称: 23S RRNA, 5S RRNA, 6-AMINOHEXANOIC ACID, ... 著者 Hansen, J.L, Schmeing, T.M, Moore, P.B, Steitz, T.A. 登録日 2002-07-26 公開日 2002-09-06 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural insights into peptide bond formation. Proc.Natl.Acad.Sci.USA, 99, 2002
4YND	The Discovery of A-893, A New Cell-Active Benzoxazinone Inhibitor of Lysine Methyltransferase SMYD2 分子名称: N-cyclohexyl-N~3~-[2-(3,4-dichlorophenyl)ethyl]-N-(2-{[(2R)-2-hydroxy-2-(3-oxo-3,4-dihydro-2H-1,4-benzoxazin-8-yl)ethyl]amino}ethyl)-beta-alaninamide, N-lysine methyltransferase SMYD2, S-ADENOSYLMETHIONINE, ... 著者 Sweis, R.F, Wang, Z, Algire, M, Arrowsmith, C.H, Brown, P.J, Chiang, G.C, Guo, J, Jakob, C.G, Kennedy, S, Li, F, Soni, N.B, Vedadi, M, Pappano, W.N. 登録日 2015-03-09 公開日 2015-05-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Discovery of A-893, A New Cell-Active Benzoxazinone Inhibitor of Lysine Methyltransferase SMYD2. Acs Med.Chem.Lett., 6, 2015
1MGR	Crystal structure of RNase Sa3,cytotoxic microbial ribonuclease 分子名称: Guanyl-specific ribonuclease Sa3, SULFATE ION 著者 Sevcik, J, Urbanikova, L, Leland, P.A, Raines, R.T. 登録日 2002-08-16 公開日 2003-02-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Links X-ray Structure of Two Crystalline Forms of a Streptomycete Ribonuclease with Cytotoxic Activity J.Biol.Chem., 277, 2002
4YLF	Insights into flavin-based electron bifurcation via the NADH-dependent reduced ferredoxin-NADP oxidoreductase structure 分子名称: Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit homolog, Dihydropyrimidine dehydrogenase subunit A, ... 著者 Ermler, U, Thauer, R.K, Demmer, J.K, Huang, H, Wang, S, Demmer, U. 登録日 2015-03-05 公開日 2015-07-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.301 Å) 主引用文献 Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure. J.Biol.Chem., 290, 2015

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