Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3K8D
DownloadVisualize
BU of 3k8d by Molmil
Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase in complex with CTP and 2-deoxy-Kdo
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, 3-deoxy-manno-octulosonate cytidylyltransferase, CYTIDINE-5'-TRIPHOSPHATE, ...
著者Heyes, D.J, Levy, C.W, Lafite, P, Scrutton, N.S, Leys, D.
登録日2009-10-14
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based mechanism of CMP-2-keto-3-deoxymanno-octulonic acid synthetase: convergent evolution of a sugar-activating enzyme with DNA/RNA polymerases
J.Biol.Chem., 284, 2009
4BK0
DownloadVisualize
BU of 4bk0 by Molmil
Crystal structure of the KIX domain of human RECQL5 (domain-swapped dimer)
分子名称: ATP-DEPENDENT DNA HELICASE Q5, DI(HYDROXYETHYL)ETHER
著者Kassube, S.A, Jinek, M, Fang, J, Tsutakawa, S, Nogales, E.
登録日2013-04-21
公開日2013-06-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Mimicry in Transcription Regulation of Human RNA Polymerase II by the DNA Helicase Recql5
Nat.Struct.Mol.Biol., 20, 2013
1XJR
DownloadVisualize
BU of 1xjr by Molmil
The Structure of a Rigorously Conserved RNA Element Within the SARS Virus Genome
分子名称: MAGNESIUM ION, s2m RNA
著者Robertson, M.P, Igel, H, Baertsch, R, Haussler, D, Ares Jr, M, Scott, W.G.
登録日2004-09-24
公開日2005-02-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structure of a rigorously conserved RNA element within the SARS virus genome
Plos Biol., 3, 2005
2JVV
DownloadVisualize
BU of 2jvv by Molmil
Solution Structure of E. coli NusG carboxyterminal domain
分子名称: Transcription antitermination protein nusG
著者Schweimer, K, Scheckenhofer, U, Roesch, P.
登録日2007-09-26
公開日2008-10-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators.
J.Mol.Biol., 391, 2009
2K06
DownloadVisualize
BU of 2k06 by Molmil
Solution structure of the aminoterminal domain of E. coli NusG
分子名称: Transcription antitermination protein nusG
著者Schweimer, K, Scheckenhofer, U, Roesch, P.
登録日2008-01-25
公開日2009-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators.
J.Mol.Biol., 391, 2009
2MZ8
DownloadVisualize
BU of 2mz8 by Molmil
Solution NMR structure of Salmonella Typhimurium transcriptional regulator protein Crl
分子名称: Sigma factor-binding protein Crl
著者Cavaliere, P, Levi-Acobas, F, Monteil, V, Bellalou, J, Mayer, C, Norel, F, Sizun, C.
登録日2015-02-07
公開日2015-12-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Binding interface between the Salmonella sigma (S)/RpoS subunit of RNA polymerase and Crl: hints from bacterial species lacking crl.
Sci Rep, 5, 2015
3ADD
DownloadVisualize
BU of 3add by Molmil
Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 3)
分子名称: L-seryl-tRNA(Sec) kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Itoh, Y, Chiba, S, Sekine, S, Yokoyama, S.
登録日2010-01-18
公開日2010-07-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for the Major Role of O-Phosphoseryl-tRNA Kinase in the UGA-Specific Encoding of Selenocysteine
Mol.Cell, 39, 2010
3ADB
DownloadVisualize
BU of 3adb by Molmil
Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 1)
分子名称: L-seryl-tRNA(Sec) kinase, MAGNESIUM ION, PHOSPHATE ION, ...
著者Itoh, Y, Chiba, S, Sekine, S, Yokoyama, S.
登録日2010-01-18
公開日2010-07-28
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for the Major Role of O-Phosphoseryl-tRNA Kinase in the UGA-Specific Encoding of Selenocysteine
Mol.Cell, 39, 2010
6EZ4
DownloadVisualize
BU of 6ez4 by Molmil
NMR structure of the C-terminal domain of the human RPAP3 protein
分子名称: RNA polymerase II-associated protein 3
著者Fabre, P, Chagot, M.E, Bragantini, B, Manival, X, Quinternet, M.
登録日2017-11-14
公開日2018-04-18
最終更新日2024-01-17
実験手法SOLUTION NMR
主引用文献The RPAP3-Cterminal domain identifies R2TP-like quaternary chaperones.
Nat Commun, 9, 2018
5VVR
DownloadVisualize
BU of 5vvr by Molmil
Ternary complex of RNA Pol II, transcription scaffold and Rad26
分子名称: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
著者Lahiri, I, Leschziner, A.E.
登録日2017-05-19
公開日2017-11-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Nature, 551, 2017
2OOM
DownloadVisualize
BU of 2oom by Molmil
NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA/RNA aptamer
分子名称: RNA 16-mer, TAR RNA element of HIV-1
著者Lebars, I, Richard, T, Di Primo, C, Toulme, J.J.
登録日2007-01-26
公開日2008-01-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA-modified aptamer
Nucleic Acids Res., 35, 2007
6DRD
DownloadVisualize
BU of 6drd by Molmil
RNA Pol II(G)
分子名称: DNA-directed RNA polymerase II subunit GRINL1A, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者Yu, X, Jishage, M, Shi, Y, Ganesan, S, Sali, A, Chait, B.T, Asturias, F, Roeder, R.G.
登録日2018-06-11
公開日2019-06-12
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1.
Nat. Struct. Mol. Biol., 25, 2018
6L1W
DownloadVisualize
BU of 6l1w by Molmil
Zinc-finger Antiviral Protein (ZAP) bound to RNA
分子名称: RNA (5'-R(*CP*GP*UP*CP*GP*U)-3'), ZINC ION, Zinc finger CCCH-type antiviral protein 1
著者Luo, X, Wang, X, Gao, Y, Zhu, J, Liu, S, Gao, G, Gao, P.
登録日2019-09-30
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Molecular Mechanism of RNA Recognition by Zinc-Finger Antiviral Protein.
Cell Rep, 30, 2020
5VVS
DownloadVisualize
BU of 5vvs by Molmil
RNA pol II elongation complex
分子名称: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
著者Lahiri, I, Leschziner, A.E.
登録日2017-05-20
公開日2017-11-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Nature, 551, 2017
4W5Q
DownloadVisualize
BU of 4w5q by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5R
DownloadVisualize
BU of 4w5r by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5T
DownloadVisualize
BU of 4w5t by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-7
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5N
DownloadVisualize
BU of 4w5n by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Defined Guide RNA
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, Sheu-Gruttadauria, J, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5O
DownloadVisualize
BU of 4w5o by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-9
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
8B9I
DownloadVisualize
BU of 8b9i by Molmil
Cryo-EM structure of MLE in complex with ADP:AlF4 and UUC RNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, MAGNESIUM ION, ...
著者Jagtap, P.K.A, Hennig, J.
登録日2022-10-06
公開日2023-10-18
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless.
Mol.Cell, 83, 2023
8B9G
DownloadVisualize
BU of 8b9g by Molmil
Cryo-EM structure of MLE in complex with ADP:AlF4 and U10 RNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ...
著者Jagtap, P.K.A, Hennig, J.
登録日2022-10-06
公開日2023-10-18
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless.
Mol.Cell, 83, 2023
6XZD
DownloadVisualize
BU of 6xzd by Molmil
Influenza C virus polymerase complex without chicken ANP32A - Subclass 2
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*GP*CP*CP*CP*UP*GP*C)-3'), ...
著者Keown, J.R, Carrique, L, Fan, H, Grimes, J.M, Fodor, E.
登録日2020-02-04
公開日2020-12-23
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Host ANP32A mediates the assembly of the influenza virus replicase.
Nature, 587, 2020
6Y0C
DownloadVisualize
BU of 6y0c by Molmil
Influenza C virus polymerase in complex with human ANP32A - Subclass 2
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*GP*CP*CP*UP*UP*UP*U)-3'), ...
著者Fan, H, Carrique, L, Keown, J.R, Grimes, J.M, Fodor, E.
登録日2020-02-07
公開日2020-11-25
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Host ANP32A mediates the assembly of the influenza virus replicase.
Nature, 587, 2020
7OM6
DownloadVisualize
BU of 7om6 by Molmil
Thosea asigna virus RdRP domain in complex with RNA
分子名称: DI(HYDROXYETHYL)ETHER, RNA (5'-R(P*AP*AP*AP*UP*UP*U)-3'), RNA-dependent RNA polymerase
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM7
DownloadVisualize
BU of 7om7 by Molmil
Thosea asigna virus RdRP domain in complex with RNA and nucleotide UMPNPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon